RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CNTNAP3BQ96NU0 1288 aa6.07□□□□□ -1.44
VPS13D-207ENST00000476169 CNTNAP3Q9BZ76 1288 aa6.07□□□□□ -1.44
VPS13D-207ENST00000476169 KBTBD4Q9NVX7 518 aa6.07□□□□□ -1.44
VPS13D-207ENST00000476169 FBXO24O75426 580 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 TRPA1O75762 1119 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
VPS13D-207ENST00000476169 MLLT1Q03111 559 aaPredicted RBP6.06□□□□□ -1.44
VPS13D-207ENST00000476169 PWP1Q13610 501 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 FAM182BQ5T319 152 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 FOXR1Q6PIV2 292 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 VPS37DQ86XT2 251 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 RELL1Q8IUW5 271 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 CEP120Q8N960 986 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 DHX38Q92620 1227 aaKnown RBP6.06□□□□□ -1.44
VPS13D-207ENST00000476169 TRERF1Q96PN7 1200 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 DZANK1Q9NVP4 752 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 PRR12Q9ULL5 1215 aa6.06□□□□□ -1.44
VPS13D-207ENST00000476169 TMA7Q9Y2S6 64 aaKnown RBP6.06□□□□□ -1.44
VPS13D-207ENST00000476169 GPLD1P80108 840 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 TBC1D8BQ0IIM8 1120 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 PAK2Q13177 524 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 MAP3K11Q16584 847 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 TPTE2Q6XPS3 522 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 ANKRD24Q8TF21 1146 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 GPRASP2Q96D09 838 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 GMLQ99445 158 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 RSRP1Q9BUV0 290 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 LNPKQ9C0E8 428 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 IGFLR1Q9H665 355 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 ZFYVE1Q9HBF4 777 aa6.05□□□□□ -1.44
VPS13D-207ENST00000476169 CWC22Q9HCG8 908 aaKnown RBP6.05□□□□□ -1.44
VPS13D-207ENST00000476169 LOC102724428A0A0B4J2F2 783 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 CDC14CA4D256 554 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 METTL12A8MUP2 240 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 F6X3S4 739 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 GPR25O00155 361 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 GBP2P32456 591 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-207ENST00000476169 GRIA4P48058 902 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 GJA8P48165 433 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 SIK1P57059 783 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 SPRED3Q2MJR0 410 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 HFE2Q6ZVN8 426 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 SV2BQ7L1I2 683 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 NOP9Q86U38 636 aaKnown RBP6.04□□□□□ -1.44
VPS13D-207ENST00000476169 KIAA0825Q8IV33 1275 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 TMEM102Q8N9M5 508 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-207ENST00000476169 PMFBP1Q8TBY8 1022 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 TRPM4Q8TD43 1214 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 ASAP3Q8TDY4 903 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 HHIPQ96QV1 700 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 TRIM56Q9BRZ2 755 aaKnown RBP6.04□□□□□ -1.44
VPS13D-207ENST00000476169 CEP44Q9C0F1 390 aa6.04□□□□□ -1.44
VPS13D-207ENST00000476169 BHLHE41Q9C0J9 482 aaPredicted RBP6.04□□□□□ -1.44
VPS13D-207ENST00000476169 GMPR2Q9P2T1 348 aaKnown RBP6.04□□□□□ -1.44
VPS13D-207ENST00000476169 MINDY4BA8MYZ0 360 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 J3QW42 95 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 PDE2AO00408 941 aaPredicted RBP6.03□□□□□ -1.44
VPS13D-207ENST00000476169 GHRHP01286 108 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 RLBP1P12271 317 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 SNRPBP14678 240 aaKnown RBP6.03□□□□□ -1.44
VPS13D-207ENST00000476169 ITPKAP23677 461 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 CTBSQ01459 385 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 MAP3K10Q02779 954 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 PCSK7Q16549 785 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 SYT9Q86SS6 491 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 VWA5B2Q8N398 1253 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 NXPE3Q969Y0 559 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 ARMC5Q96C12 935 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 TMEM74Q96NL1 305 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 SPON2Q9BUD6 331 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 PBX4Q9BYU1 374 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 UBE2OQ9C0C9 1292 aaKnown RBP6.03□□□□□ -1.44
VPS13D-207ENST00000476169 RBSNQ9H1K0 784 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 RASSF4Q9H2L5 321 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 DNAJB12Q9NXW2 375 aaKnown RBP6.03□□□□□ -1.44
VPS13D-207ENST00000476169 ADAMTS1Q9UHI8 967 aa6.03□□□□□ -1.44
VPS13D-207ENST00000476169 A0A096LPE4 126 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 A0A1W2PPZ6 126 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 ZBTB42B2RXF5 422 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 NFKBIEO00221 500 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 PPFIA3O75145 1194 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 CELA3AP09093 270 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 EIF2AK2P19525 551 aaKnown RBP6.02□□□□□ -1.45
VPS13D-207ENST00000476169 ATP11AP98196 1134 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 SV2AQ7L0J3 742 aa6.02□□□□□ -1.45
VPS13D-207ENST00000476169 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.02□□□□□ -1.45
VPS13D-207ENST00000476169 SMNDC1O75940 238 aaKnown RBP eCLIP6.01□□□□□ -1.45
VPS13D-207ENST00000476169 BMP4P12644 408 aa6.01□□□□□ -1.45
VPS13D-207ENST00000476169 ATF4P18848 351 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-207ENST00000476169 EIF4A3P38919 411 aaKnown RBP6.01□□□□□ -1.45
VPS13D-207ENST00000476169 LIG3P49916 1009 aa6.01□□□□□ -1.45
VPS13D-207ENST00000476169 ZNF468Q5VIY5 522 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-207ENST00000476169 MCF2L2Q86YR7 1114 aa6.01□□□□□ -1.45
VPS13D-207ENST00000476169 ZNF576Q9H609 170 aa6.01□□□□□ -1.45
VPS13D-207ENST00000476169 GPN3Q9UHW5 284 aaPredicted RBP6.01□□□□□ -1.45
VPS13D-207ENST00000476169 C11orf95C9JLR9 678 aaPredicted RBP6□□□□□ -1.45
VPS13D-207ENST00000476169 SIN3BO75182 1162 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 STK10O94804 968 aaKnown RBP6□□□□□ -1.45
VPS13D-207ENST00000476169 FGRP09769 529 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 CPB1P15086 417 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms