RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 DHX32Q7L7V1 743 aaKnown RBP18.92■□□□□ 0.62
VARS2-207ENST00000476162 FERMT3Q86UX7 667 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 BRF1Q92994 677 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 COL22A1Q8NFW1 1626 aaPredicted RBP18.92■□□□□ 0.62
VARS2-207ENST00000476162 RIC1Q4ADV7 1423 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 A0A0G2JS52 829 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 ERVV-1B6SEH8 477 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 PHF14O94880 888 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 CNNM1Q9NRU3 951 aa18.92■□□□□ 0.62
VARS2-207ENST00000476162 SPEF2Q9C093 1822 aa18.91■□□□□ 0.62
VARS2-207ENST00000476162 JAK2O60674 1132 aa18.91■□□□□ 0.62
VARS2-207ENST00000476162 CSPP1Q1MSJ5 1256 aa18.91■□□□□ 0.62
VARS2-207ENST00000476162 PI16Q6UXB8 463 aa18.91■□□□□ 0.62
VARS2-207ENST00000476162 UBN2Q6ZU65 1347 aa18.91■□□□□ 0.62
VARS2-207ENST00000476162 DDB1Q16531 1140 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 WASHC4Q2M389 1173 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 LRRFIP1Q32MZ4 808 aaKnown RBP18.9■□□□□ 0.62
VARS2-207ENST00000476162 RNF214Q8ND24 703 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 TSPY26PQ9H489 355 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 SPATA31A1Q5TZJ5 1347 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 E7EWF7 191 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 PDE8AO60658 829 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 CCDC183Q5T5S1 534 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 TTLL5Q6EMB2 1281 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 FAM173BQ6P4H8 233 aa18.9■□□□□ 0.62
VARS2-207ENST00000476162 MTERF4Q7Z6M4 381 aaKnown RBP18.9■□□□□ 0.62
VARS2-207ENST00000476162 ZFYP08048 801 aaPredicted RBP18.89■□□□□ 0.61
VARS2-207ENST00000476162 ZNF34Q8IZ26 560 aa18.89■□□□□ 0.61
VARS2-207ENST00000476162 ACSBG1Q96GR2 724 aa18.89■□□□□ 0.61
VARS2-207ENST00000476162 CDCA7Q9BWT1 371 aaPredicted RBP18.89■□□□□ 0.61
VARS2-207ENST00000476162 EXOSC10Q01780 885 aaKnown RBP18.89■□□□□ 0.61
VARS2-207ENST00000476162 SCRN1Q12765 414 aa18.89■□□□□ 0.61
VARS2-207ENST00000476162 EIF5P55010 431 aaKnown RBP18.88■□□□□ 0.61
VARS2-207ENST00000476162 UTP14CQ5TAP6 766 aaKnown RBP18.88■□□□□ 0.61
VARS2-207ENST00000476162 VGLL2Q8N8G2 317 aa18.88■□□□□ 0.61
VARS2-207ENST00000476162 FOXP2O15409 715 aa18.88■□□□□ 0.61
VARS2-207ENST00000476162 MCAMP43121 646 aa18.88■□□□□ 0.61
VARS2-207ENST00000476162 KRT85P78386 507 aa18.88■□□□□ 0.61
VARS2-207ENST00000476162 INTS5Q6P9B9 1019 aaKnown RBP18.88■□□□□ 0.61
VARS2-207ENST00000476162 NUP98P52948 1817 aa18.87■□□□□ 0.61
VARS2-207ENST00000476162 MSNP26038 577 aaKnown RBP18.87■□□□□ 0.61
VARS2-207ENST00000476162 APOBRQ0VD83 1088 aa18.87■□□□□ 0.61
VARS2-207ENST00000476162 APPBP2Q92624 585 aa18.87■□□□□ 0.61
VARS2-207ENST00000476162 DDX11Q96FC9 970 aa18.87■□□□□ 0.61
VARS2-207ENST00000476162 PUS7LQ9H0K6 701 aaKnown RBP18.87■□□□□ 0.61
VARS2-207ENST00000476162 THRAP3Q9Y2W1 955 aaKnown RBP18.87■□□□□ 0.61
VARS2-207ENST00000476162 R3HCC1Q9Y3T6 440 aaKnown RBP18.87■□□□□ 0.61
VARS2-207ENST00000476162 DOT1LQ8TEK3 1739 aa18.87■□□□□ 0.61
VARS2-207ENST00000476162 ANKRD36CQ5JPF3 1778 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 PFKFB2O60825 505 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 PDE8BO95263 885 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 ATP6V1AP38606 617 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 CHST3Q7LGC8 479 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 TTC6Q86TZ1 520 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 MARCH10Q8NA82 808 aaPredicted RBP18.86■□□□□ 0.61
VARS2-207ENST00000476162 PDLIM2Q96JY6 352 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 AGXT2Q9BYV1 514 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 ABCC12Q96J65 1359 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 CCDC87Q9NVE4 849 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 ZHX1Q9UKY1 873 aaPredicted RBP18.86■□□□□ 0.61
VARS2-207ENST00000476162 WNK3Q9BYP7 1800 aa18.86■□□□□ 0.61
VARS2-207ENST00000476162 CRKLP46109 303 aaKnown RBP18.85■□□□□ 0.61
VARS2-207ENST00000476162 SUSD4Q5VX71 490 aa18.85■□□□□ 0.61
VARS2-207ENST00000476162 LAMA4Q16363 1823 aa18.85■□□□□ 0.61
VARS2-207ENST00000476162 FAM177BA6PVY3 158 aa18.85■□□□□ 0.61
VARS2-207ENST00000476162 FGAP02671 866 aa18.85■□□□□ 0.61
VARS2-207ENST00000476162 HCLS1P14317 486 aaPredicted RBP18.85■□□□□ 0.61
VARS2-207ENST00000476162 CTNNA3Q9UI47 895 aa18.85■□□□□ 0.61
VARS2-207ENST00000476162 LOC102724428A0A0B4J2F2 783 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 NUTM2BA6NNL0 878 aaPredicted RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 NUTM2EB1AL46 878 aaPredicted RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 LETM1O95202 739 aaPredicted RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 SIK1P57059 783 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 HAND2P61296 217 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 DMTNQ08495 405 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 NUTM2AQ8IVF1 878 aaPredicted RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 SMARCC2Q8TAQ2 1214 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 ZNF512BQ96KM6 892 aaPredicted RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 LLPHQ9BRT6 129 aaKnown RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 TFIP11Q9UBB9 837 aaKnown RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 SLIT2O94813 1529 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 MYH3P11055 1940 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 CCT2P78371 535 aaKnown RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
VARS2-207ENST00000476162 HELBQ8NG08 1087 aaPredicted RBP18.84■□□□□ 0.61
VARS2-207ENST00000476162 GPAA1O43292 621 aa18.83■□□□□ 0.6
VARS2-207ENST00000476162 CTDNEP1O95476 244 aa18.83■□□□□ 0.6
VARS2-207ENST00000476162 ITPK1Q13572 414 aa18.83■□□□□ 0.6
VARS2-207ENST00000476162 IMMTQ16891 758 aaKnown RBP18.83■□□□□ 0.6
VARS2-207ENST00000476162 NSUN7Q8NE18 718 aaKnown RBP18.83■□□□□ 0.6
VARS2-207ENST00000476162 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.83■□□□□ 0.64e-8■■■■■ 54
VARS2-207ENST00000476162 ELP1O95163 1332 aa18.83■□□□□ 0.6
VARS2-207ENST00000476162 UQCRHLA0A096LP55 91 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 H3BQV1 296 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 DYNC1I1O14576 645 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 UQCRHP07919 91 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 PHKA1P46020 1223 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 IFFO2Q5TF58 517 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 CCDC102BQ68D86 513 aa18.82■□□□□ 0.6
VARS2-207ENST00000476162 NAP1L2Q9ULW6 460 aaPredicted RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms