RNA–Protein interactions for RNA: ENST00000476038.5

LCLAT1-207, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 3

Gene LCLAT1, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-207ENST00000476038 ATP2B4P23634 1241 aa12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 GOLGA2Q08379 1002 aa12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 MKRN3Q13064 507 aaKnown RBP12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 LAS1LQ9Y4W2 734 aaKnown RBP12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 MYO3BQ8WXR4 1341 aa12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 MED23Q9ULK4 1368 aa12.54□□□□□ -0.4
LCLAT1-207ENST00000476038 MKRN4PQ13434 485 aaPredicted RBP12.53□□□□□ -0.4
LCLAT1-207ENST00000476038 NBPF9Q3BBW0 867 aa12.53□□□□□ -0.4
LCLAT1-207ENST00000476038 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
LCLAT1-207ENST00000476038 RIC3Q7Z5B4 369 aa12.53□□□□□ -0.4
LCLAT1-207ENST00000476038 ANKRD18AQ8IVF6 992 aa12.53□□□□□ -0.4
LCLAT1-207ENST00000476038 COL1A1P02452 1464 aaPredicted RBP12.53□□□□□ -0.4
LCLAT1-207ENST00000476038 WNT10BO00744 389 aa12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 PDE8AO60658 829 aa12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 PCCAP05165 728 aaPredicted RBP12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 MMP14P50281 582 aa12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 APOBEC3FQ8IUX4 373 aaKnown RBP12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 TRIM17Q9Y577 477 aa12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.41
LCLAT1-207ENST00000476038 MANSC4A6NHS7 340 aaPredicted RBP12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 INHBEP58166 350 aa12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 DACT2Q5SW24 774 aa12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 FBXW7Q969H0 707 aa12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 CDC5LQ99459 802 aaKnown RBP12.51□□□□□ -0.41
LCLAT1-207ENST00000476038 SPDYE4A6NLX3 237 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 SASH1O94885 1247 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 PRKG1Q13976 671 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 NEUROD2Q15784 382 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 STRIP1Q5VSL9 837 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 OTOP1Q7RTM1 612 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 CCDC85AQ96PX6 553 aaPredicted RBP12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 MYD88Q99836 296 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 R3HDMLQ9H3Y0 253 aa12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
LCLAT1-207ENST00000476038 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 ZBTB48P10074 688 aaPredicted RBP12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 LDLRAD1Q5T700 205 aa12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 IFNL1Q8IU54 200 aa12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 ERO1AQ96HE7 468 aa12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 COA1Q9GZY4 146 aa12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 KIAA0100Q14667 2235 aaKnown RBP12.49□□□□□ -0.41
LCLAT1-207ENST00000476038 CTSWP56202 376 aa12.48□□□□□ -0.41
LCLAT1-207ENST00000476038 SLC10A4Q96EP9 437 aa12.48□□□□□ -0.41
LCLAT1-207ENST00000476038 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
LCLAT1-207ENST00000476038 SPINK5Q9NQ38 1064 aaPredicted RBP12.48□□□□□ -0.41
LCLAT1-207ENST00000476038 DDX58O95786 925 aaKnown RBP12.47□□□□□ -0.41
LCLAT1-207ENST00000476038 CCT4P50991 539 aaKnown RBP12.47□□□□□ -0.41
LCLAT1-207ENST00000476038 CCDC146Q8IYE0 955 aa12.47□□□□□ -0.41
LCLAT1-207ENST00000476038 BSDC1Q9NW68 430 aaPredicted RBP12.47□□□□□ -0.41
LCLAT1-207ENST00000476038 TRIM35Q9UPQ4 493 aa12.47□□□□□ -0.41
LCLAT1-207ENST00000476038 UNCXA6NJT0 531 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 PPP1R12BO60237 982 aaPredicted RBP12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 FXR1P51114 621 aaKnown RBP eCLIP12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 MAP3K11Q16584 847 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 OTUD7BQ6GQQ9 843 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 ARMC5Q96C12 935 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 RUNDC1Q96C34 613 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 WNK4Q96J92 1243 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 PHAXQ9H814 394 aaKnown RBP12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 MINPP1Q9UNW1 487 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 PTPN22Q9Y2R2 807 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 PPP2R3BQ9Y5P8 575 aa12.46□□□□□ -0.41
LCLAT1-207ENST00000476038 IGF2BP3O00425 579 aaKnown RBP eCLIP12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 RALBP1Q15311 655 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 TTLL5Q6EMB2 1281 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 KIAA0825Q8IV33 1275 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 CD99L2Q8TCZ2 262 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 JARID2Q92833 1246 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 METTL22Q9BUU2 404 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 RNF39Q9H2S5 420 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 EFCC1Q9HA90 598 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 OTOFQ9HC10 1997 aa12.45□□□□□ -0.42
LCLAT1-207ENST00000476038 SSC5DA1L4H1 1573 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 WTIPA6NIX2 430 aaPredicted RBP12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 WDR43Q15061 677 aaKnown RBP eCLIP12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 DLGAP5Q15398 846 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 ZBED3Q96IU2 234 aaPredicted RBP12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 CLMNQ96JQ2 1002 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 CHMP4AQ9BY43 222 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 HTTP42858 3142 aa12.44□□□□□ -0.42
LCLAT1-207ENST00000476038 MYO1BO43795 1136 aa12.43□□□□□ -0.42
LCLAT1-207ENST00000476038 EN2P19622 333 aaPredicted RBP12.43□□□□□ -0.42
LCLAT1-207ENST00000476038 IGHMBP2P38935 993 aaKnown RBP12.43□□□□□ -0.42
LCLAT1-207ENST00000476038 IREB2P48200 963 aaKnown RBP12.43□□□□□ -0.42
LCLAT1-207ENST00000476038 GTF2IP78347 998 aa12.43□□□□□ -0.42
LCLAT1-207ENST00000476038 SP3Q02447 781 aa12.43□□□□□ -0.42
LCLAT1-207ENST00000476038 CRHR2Q13324 411 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms