RNA–Protein interactions for RNA: ENST00000476034.5

PDE6B-209, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 1,012 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-209ENST00000476034 MTX1Q13505 466 aa24.04■■□□□ 1.44
PDE6B-209ENST00000476034 ZNF609O15014 1411 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 SNAP23O00161 211 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 EYA2O00167 538 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 RPS12P25398 132 aaKnown RBP24.03■■□□□ 1.44
PDE6B-209ENST00000476034 EPS15P42566 896 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 UBE4AQ14139 1066 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 METTL24Q5JXM2 366 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 FBXO3Q9UK99 471 aa24.03■■□□□ 1.44
PDE6B-209ENST00000476034 VIL1P09327 827 aaKnown RBP24.02■■□□□ 1.44
PDE6B-209ENST00000476034 LDHDQ86WU2 507 aa24.02■■□□□ 1.44
PDE6B-209ENST00000476034 PANK1Q8TE04 598 aa24.02■■□□□ 1.44
PDE6B-209ENST00000476034 DPF2Q92785 391 aa24.02■■□□□ 1.44
PDE6B-209ENST00000476034 CIAO1O76071 339 aa24.01■■□□□ 1.43
PDE6B-209ENST00000476034 EAPPQ56P03 285 aaPredicted RBP24.01■■□□□ 1.43
PDE6B-209ENST00000476034 ADARB2Q9NS39 739 aaKnown RBP24.01■■□□□ 1.43
PDE6B-209ENST00000476034 ZBTB12Q9Y330 459 aaPredicted RBP24.01■■□□□ 1.43
PDE6B-209ENST00000476034 USP17L3A6NCW0 530 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 USP17L4A6NCW7 530 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 ZBTB7BO15156 539 aaPredicted RBP24■■□□□ 1.43
PDE6B-209ENST00000476034 SRGAP3O43295 1099 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 PDE8BO95263 885 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 POTEIP0CG38 1075 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 POTEJP0CG39 1038 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 CHADLQ6NUI6 762 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 USP17L1Q7RTZ2 530 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 ZNF804AQ7Z570 1209 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 VGLL2Q8N8G2 317 aa24■■□□□ 1.43
PDE6B-209ENST00000476034 RSBN1LQ6PCB5 846 aaPredicted RBP23.99■■□□□ 1.43
PDE6B-209ENST00000476034 USP50Q70EL3 339 aaPredicted RBP23.99■■□□□ 1.43
PDE6B-209ENST00000476034 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.99■■□□□ 1.43
PDE6B-209ENST00000476034 SIL1Q9H173 461 aa23.99■■□□□ 1.43
PDE6B-209ENST00000476034 CD209Q9NNX6 404 aa23.99■■□□□ 1.43
PDE6B-209ENST00000476034 COPRSQ9NQ92 184 aa23.99■■□□□ 1.43
PDE6B-209ENST00000476034 ATG9AQ7Z3C6 839 aa23.98■■□□□ 1.43
PDE6B-209ENST00000476034 CNOT7Q9UIV1 285 aaKnown RBP23.98■■□□□ 1.43
PDE6B-209ENST00000476034 H7C1D1 291 aa23.97■■□□□ 1.43
PDE6B-209ENST00000476034 HSPA6P17066 643 aa23.97■■□□□ 1.43
PDE6B-209ENST00000476034 STRIP1Q5VSL9 837 aa23.97■■□□□ 1.43
PDE6B-209ENST00000476034 MICALL2Q8IY33 904 aa23.97■■□□□ 1.43
PDE6B-209ENST00000476034 AGBL3Q8NEM8 1001 aa23.97■■□□□ 1.43
PDE6B-209ENST00000476034 PA2G4Q9UQ80 394 aaKnown RBP23.97■■□□□ 1.43
PDE6B-209ENST00000476034 CLEC11AQ9Y240 323 aa23.97■■□□□ 1.43
PDE6B-209ENST00000476034 IL1R1P14778 569 aa23.96■■□□□ 1.43
PDE6B-209ENST00000476034 IL15P40933 162 aaPredicted RBP23.96■■□□□ 1.43
PDE6B-209ENST00000476034 MVPQ14764 893 aaKnown RBP23.96■■□□□ 1.43
PDE6B-209ENST00000476034 PUM3Q15397 648 aaKnown RBP23.96■■□□□ 1.43
PDE6B-209ENST00000476034 MYO3BQ8WXR4 1341 aa23.95■■□□□ 1.42
PDE6B-209ENST00000476034 DACT2Q5SW24 774 aa23.95■■□□□ 1.42
PDE6B-209ENST00000476034 FBXW7Q969H0 707 aa23.95■■□□□ 1.42
PDE6B-209ENST00000476034 PNMA6EA0A0J9YXQ4 647 aa23.94■■□□□ 1.42
PDE6B-209ENST00000476034 PDE3AQ14432 1141 aa23.94■■□□□ 1.42
PDE6B-209ENST00000476034 TTLL5Q6EMB2 1281 aa23.94■■□□□ 1.42
PDE6B-209ENST00000476034 GMLQ99445 158 aa23.94■■□□□ 1.42
PDE6B-209ENST00000476034 C1orf115Q9H7X2 142 aa23.94■■□□□ 1.42
PDE6B-209ENST00000476034 DDX19BQ9UMR2 479 aa23.94■■□□□ 1.42
PDE6B-209ENST00000476034 ARAP2Q8WZ64 1704 aa23.93■■□□□ 1.42
PDE6B-209ENST00000476034 SHTN1A0MZ66 631 aa23.93■■□□□ 1.42
PDE6B-209ENST00000476034 FGFR2P21802 821 aa23.93■■□□□ 1.42
PDE6B-209ENST00000476034 HIBADHP31937 336 aaKnown RBP23.93■■□□□ 1.42
PDE6B-209ENST00000476034 GYG1P46976 350 aa23.93■■□□□ 1.42
PDE6B-209ENST00000476034 CEP126Q9P2H0 1117 aa23.93■■□□□ 1.42
PDE6B-209ENST00000476034 COG6Q9Y2V7 657 aa23.93■■□□□ 1.42
PDE6B-209ENST00000476034 IFIT1P09914 478 aaKnown RBP23.92■■□□□ 1.42
PDE6B-209ENST00000476034 GTF2IP78347 998 aa23.92■■□□□ 1.42
PDE6B-209ENST00000476034 CAVIN4Q5BKX8 364 aa23.92■■□□□ 1.42
PDE6B-209ENST00000476034 LPIN2Q92539 896 aa23.92■■□□□ 1.42
PDE6B-209ENST00000476034 FAM84BQ96KN1 310 aaPredicted RBP23.92■■□□□ 1.42
PDE6B-209ENST00000476034 SLC5A1P13866 664 aa23.91■■□□□ 1.42
PDE6B-209ENST00000476034 ATP8B2P98198 1209 aa23.91■■□□□ 1.42
PDE6B-209ENST00000476034 VPS37DQ86XT2 251 aa23.91■■□□□ 1.42
PDE6B-209ENST00000476034 TRPM4Q8TD43 1214 aa23.91■■□□□ 1.42
PDE6B-209ENST00000476034 CHMP4BQ9H444 224 aaKnown RBP23.91■■□□□ 1.42
PDE6B-209ENST00000476034 MYH13Q9UKX3 1938 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 USP17L8P0C7I0 530 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 APLP1P51693 650 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 ZNF280AP59817 542 aaPredicted RBP23.9■■□□□ 1.42
PDE6B-209ENST00000476034 POLA2Q14181 598 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 ATP2B3Q16720 1220 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 SAMD7Q7Z3H4 446 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 FBXO33Q7Z6M2 555 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 TDRD7Q8NHU6 1098 aaKnown RBP23.9■■□□□ 1.42
PDE6B-209ENST00000476034 SSH3Q8TE77 659 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 ZC3H15Q8WU90 426 aaKnown RBP23.9■■□□□ 1.42
PDE6B-209ENST00000476034 MXD3Q9BW11 206 aa23.9■■□□□ 1.42
PDE6B-209ENST00000476034 SASH1O94885 1247 aa23.89■■□□□ 1.41
PDE6B-209ENST00000476034 HIRAP54198 1017 aaPredicted RBP23.89■■□□□ 1.41
PDE6B-209ENST00000476034 C20orf194Q5TEA3 1177 aa23.89■■□□□ 1.41
PDE6B-209ENST00000476034 MAP1SQ66K74 1059 aaPredicted RBP23.89■■□□□ 1.41
PDE6B-209ENST00000476034 MMP14P50281 582 aa23.88■■□□□ 1.41
PDE6B-209ENST00000476034 FKBP1AP62942 108 aaKnown RBP23.88■■□□□ 1.41
PDE6B-209ENST00000476034 KIF4BQ2VIQ3 1234 aa23.88■■□□□ 1.41
PDE6B-209ENST00000476034 TBC1D10BQ4KMP7 808 aaPredicted RBP23.88■■□□□ 1.41
PDE6B-209ENST00000476034 CNTROBQ8N137 903 aa23.88■■□□□ 1.41
PDE6B-209ENST00000476034 PGAP2Q9UHJ9 254 aa23.88■■□□□ 1.41
PDE6B-209ENST00000476034 FAM205AQ6ZU69 1335 aa23.87■■□□□ 1.41
PDE6B-209ENST00000476034 PASKQ96RG2 1323 aa23.87■■□□□ 1.41
PDE6B-209ENST00000476034 ITGBL1O95965 494 aaPredicted RBP23.87■■□□□ 1.41
PDE6B-209ENST00000476034 EGFRP00533 1210 aa23.87■■□□□ 1.41
PDE6B-209ENST00000476034 CEP85Q6P2H3 762 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms