RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TWISTNBQ3B726 338 aaPredicted RBP13.89□□□□□ -0.19
CDRT1-205ENST00000475944 REM2Q8IYK8 340 aaPredicted RBP13.89□□□□□ -0.19
CDRT1-205ENST00000475944 OGFOD1Q8N543 542 aa13.89□□□□□ -0.19
CDRT1-205ENST00000475944 MYO3BQ8WXR4 1341 aa13.89□□□□□ -0.19
CDRT1-205ENST00000475944 SPEF2Q9C093 1822 aa13.88□□□□□ -0.19
CDRT1-205ENST00000475944 TRPA1O75762 1119 aa13.88□□□□□ -0.19
CDRT1-205ENST00000475944 IGHMBP2P38935 993 aaKnown RBP13.88□□□□□ -0.19
CDRT1-205ENST00000475944 UBE3BQ7Z3V4 1068 aa13.88□□□□□ -0.19
CDRT1-205ENST00000475944 RASAL3Q86YV0 1011 aa13.88□□□□□ -0.19
CDRT1-205ENST00000475944 COA1Q9GZY4 146 aa13.88□□□□□ -0.19
CDRT1-205ENST00000475944 RNF186Q9NXI6 227 aa13.88□□□□□ -0.19
CDRT1-205ENST00000475944 SLC4A2P04920 1241 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 STRIP1Q5VSL9 837 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 WWC1Q8IX03 1113 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 FBXW7Q969H0 707 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 CSRNP1Q96S65 589 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 LEMD3Q9Y2U8 911 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 AKAP11Q9UKA4 1901 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 IL16Q14005 1332 aa13.87□□□□□ -0.19
CDRT1-205ENST00000475944 WTIPA6NIX2 430 aaPredicted RBP13.86□□□□□ -0.19
CDRT1-205ENST00000475944 H7C1W4 665 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 NF2P35240 595 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 MMP14P50281 582 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 DACT2Q5SW24 774 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 PLA2G12BQ9BX93 195 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 ANKRD2Q9GZV1 360 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 MYH16Q9H6N6 1097 aa13.86□□□□□ -0.19
CDRT1-205ENST00000475944 ITGA6P23229 1130 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 FLIIQ13045 1269 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 GCKRQ14397 625 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 G2E3Q7L622 706 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 MPHOSPH8Q99549 860 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 ZNF804BA4D1E1 1349 aa13.85□□□□□ -0.19
CDRT1-205ENST00000475944 WNT10BO00744 389 aa13.84□□□□□ -0.19
CDRT1-205ENST00000475944 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-205ENST00000475944 TTLL12Q14166 644 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-205ENST00000475944 NCBP3Q53F19 620 aaKnown RBP13.84□□□□□ -0.19
CDRT1-205ENST00000475944 DNAAF4Q8WXU2 420 aa13.84□□□□□ -0.19
CDRT1-205ENST00000475944 MXD3Q9BW11 206 aa13.84□□□□□ -0.19
CDRT1-205ENST00000475944 HDAC9Q9UKV0 1011 aa13.84□□□□□ -0.19
CDRT1-205ENST00000475944 ZNF646O15015 1829 aaPredicted RBP13.84□□□□□ -0.19
CDRT1-205ENST00000475944 KCNJ4P48050 445 aa13.83□□□□□ -0.2
CDRT1-205ENST00000475944 TTLL5Q6EMB2 1281 aa13.83□□□□□ -0.2
CDRT1-205ENST00000475944 TXNRD3Q86VQ6 643 aa13.83□□□□□ -0.2
CDRT1-205ENST00000475944 LINS1Q8NG48 757 aa13.83□□□□□ -0.2
CDRT1-205ENST00000475944 SCAF8Q9UPN6 1271 aaKnown RBP13.83□□□□□ -0.2
CDRT1-205ENST00000475944 UBE2Q2LH0YL09 131 aa13.82□□□□□ -0.2
CDRT1-205ENST00000475944 CSF1RP07333 972 aa13.82□□□□□ -0.2
CDRT1-205ENST00000475944 CASP7P55210 303 aa13.82□□□□□ -0.2
CDRT1-205ENST00000475944 CCDC184Q52MB2 194 aa13.82□□□□□ -0.2
CDRT1-205ENST00000475944 PRAMEF18Q5VWM3 479 aa13.82□□□□□ -0.2
CDRT1-205ENST00000475944 MOB2Q70IA6 237 aa13.82□□□□□ -0.2
CDRT1-205ENST00000475944 CTU1Q7Z7A3 348 aaKnown RBP13.82□□□□□ -0.2
CDRT1-205ENST00000475944 APOBEC3FQ8IUX4 373 aaKnown RBP13.82□□□□□ -0.2
CDRT1-205ENST00000475944 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
CDRT1-205ENST00000475944 SASH1O94885 1247 aa13.81□□□□□ -0.2
CDRT1-205ENST00000475944 GTF2IP78347 998 aa13.81□□□□□ -0.2
CDRT1-205ENST00000475944 CHRNDQ07001 517 aa13.81□□□□□ -0.2
CDRT1-205ENST00000475944 KIAA0825Q8IV33 1275 aa13.81□□□□□ -0.2
CDRT1-205ENST00000475944 FANCIQ9NVI1 1328 aa13.81□□□□□ -0.2
CDRT1-205ENST00000475944 KLRK1P26718 216 aa13.8□□□□□ -0.2
CDRT1-205ENST00000475944 ARMC9Q7Z3E5 817 aa13.8□□□□□ -0.2
CDRT1-205ENST00000475944 COL1A1P02452 1464 aaPredicted RBP13.8□□□□□ -0.2
CDRT1-205ENST00000475944 CACNA1FO60840 1977 aa13.8□□□□□ -0.2
CDRT1-205ENST00000475944 SLC34A2O95436 690 aa13.79□□□□□ -0.2
CDRT1-205ENST00000475944 SREBF2Q12772 1141 aa13.79□□□□□ -0.2
CDRT1-205ENST00000475944 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
CDRT1-205ENST00000475944 PKN2Q16513 984 aaKnown RBP13.79□□□□□ -0.2
CDRT1-205ENST00000475944 WDR63Q8IWG1 891 aa13.79□□□□□ -0.2
CDRT1-205ENST00000475944 CD209Q9NNX6 404 aa13.79□□□□□ -0.2
CDRT1-205ENST00000475944 VAMP4O75379 141 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 TBC1D8O95759 1140 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 TM4SF4P48230 202 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 DLGAP5Q15398 846 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 C15orf52Q6ZUT6 534 aaKnown RBP13.78□□□□□ -0.2
CDRT1-205ENST00000475944 ZNF804AQ7Z570 1209 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 ZBED3Q96IU2 234 aaPredicted RBP13.78□□□□□ -0.2
CDRT1-205ENST00000475944 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 CHMP3Q9Y3E7 222 aa13.78□□□□□ -0.2
CDRT1-205ENST00000475944 SOX10P56693 466 aa13.77□□□□□ -0.21
CDRT1-205ENST00000475944 PTPN12Q05209 780 aaKnown RBP13.77□□□□□ -0.21
CDRT1-205ENST00000475944 PRKG1Q13976 671 aa13.77□□□□□ -0.21
CDRT1-205ENST00000475944 NOM1Q5C9Z4 860 aaKnown RBP13.77□□□□□ -0.21
CDRT1-205ENST00000475944 ZNF296Q8WUU4 475 aaPredicted RBP13.77□□□□□ -0.21
CDRT1-205ENST00000475944 IRS2Q9Y4H2 1338 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 MYO1BO43795 1136 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 TAF5LO75529 589 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 FOXO4P98177 505 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
CDRT1-205ENST00000475944 MKRN3Q13064 507 aaKnown RBP13.76□□□□□ -0.21
CDRT1-205ENST00000475944 CCDC57Q2TAC2 916 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 BEND3Q5T5X7 828 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 LDLRAD1Q5T700 205 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 MTMR14Q8NCE2 650 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 HELBQ8NG08 1087 aaPredicted RBP13.76□□□□□ -0.21
CDRT1-205ENST00000475944 DEFB129Q9H1M3 183 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 ANGEL1Q9UNK9 670 aaKnown RBP13.76□□□□□ -0.21
CDRT1-205ENST00000475944 HPS5Q9UPZ3 1129 aa13.76□□□□□ -0.21
CDRT1-205ENST00000475944 SALL2Q9Y467 1007 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms