RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 UBXN4Q92575 508 aa20.65■□□□□ 0.9
CCM2-207ENST00000475551 FTOQ9C0B1 505 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCM2-207ENST00000475551 XPO4Q9C0E2 1151 aaKnown RBP20.65■□□□□ 0.9
CCM2-207ENST00000475551 TMC6Q7Z403 805 aa20.65■□□□□ 0.9
CCM2-207ENST00000475551 FMR1NBQ8N0W7 255 aaPredicted RBP20.65■□□□□ 0.9
CCM2-207ENST00000475551 NSUN7Q8NE18 718 aaKnown RBP20.64■□□□□ 0.9
CCM2-207ENST00000475551 CERKQ8TCT0 537 aa20.64■□□□□ 0.9
CCM2-207ENST00000475551 TLR7Q9NYK1 1049 aaKnown RBP20.64■□□□□ 0.9
CCM2-207ENST00000475551 TPM1P09493 284 aa20.64■□□□□ 0.89
CCM2-207ENST00000475551 UBXN6Q9BZV1 441 aa20.64■□□□□ 0.89
CCM2-207ENST00000475551 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.63■□□□□ 0.89
CCM2-207ENST00000475551 IFNKQ9P0W0 207 aa20.63■□□□□ 0.89
CCM2-207ENST00000475551 U3KPZ7 1027 aaPredicted RBP20.63■□□□□ 0.89
CCM2-207ENST00000475551 SMC2O95347 1197 aa20.63■□□□□ 0.89
CCM2-207ENST00000475551 ME1P48163 572 aa20.63■□□□□ 0.89
CCM2-207ENST00000475551 TXLNBQ8N3L3 684 aa20.63■□□□□ 0.89
CCM2-207ENST00000475551 MRPS27Q92552 414 aaKnown RBP20.63■□□□□ 0.89
CCM2-207ENST00000475551 MAP3K2Q9Y2U5 619 aa20.63■□□□□ 0.89
CCM2-207ENST00000475551 KDM3BQ7LBC6 1761 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 ANXA1P04083 346 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 MUM1L1Q5H9M0 696 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 KIAA1468Q9P260 1216 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 DBF4Q9UBU7 674 aaPredicted RBP20.62■□□□□ 0.89
CCM2-207ENST00000475551 COL15A1P39059 1388 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 HOMER1Q86YM7 354 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 SDF4Q9BRK5 362 aa20.62■□□□□ 0.89
CCM2-207ENST00000475551 NCAPD2Q15021 1401 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 UTYO14607 1347 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 A0A1W2PQ27 194 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 A0A1W2PQ64 194 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 A0A1W2PQD8 194 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 EFCAB8A8MWE9 144 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 TADA3O75528 432 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 ADALQ6DHV7 355 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 KSR2Q6VAB6 950 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 SYTL4Q96C24 671 aaPredicted RBP20.61■□□□□ 0.89
CCM2-207ENST00000475551 CTDNEP1O95476 244 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 KRT28Q7Z3Y7 464 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 ERCC4Q92889 916 aaPredicted RBP20.61■□□□□ 0.89
CCM2-207ENST00000475551 DNAI1Q9UI46 699 aa20.61■□□□□ 0.89
CCM2-207ENST00000475551 ABCC6O95255 1503 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 PIK3C2AO00443 1686 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 PTPDC1A2A3K4 754 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 RAD51AP2Q09MP3 1159 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 DPCR1Q3MIW9 517 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 CCDC158Q5M9N0 1113 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 TRIM65Q6PJ69 517 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 MNS1Q8NEH6 495 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 KAZALD1Q96I82 304 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 SUCLG2Q96I99 432 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 FEZ2Q9UHY8 353 aaPredicted RBP20.6■□□□□ 0.89
CCM2-207ENST00000475551 PCDHA7Q9UN72 937 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 RFX7Q2KHR2 1363 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 CYP21A2P08686 494 aa20.6■□□□□ 0.89
CCM2-207ENST00000475551 HMGB1P09429 215 aaKnown RBP20.6■□□□□ 0.89
CCM2-207ENST00000475551 ZRSR1Q15695 479 aaKnown RBP20.6■□□□□ 0.89
CCM2-207ENST00000475551 MRC1P22897 1456 aa20.59■□□□□ 0.89
CCM2-207ENST00000475551 TOM1O60784 492 aa20.59■□□□□ 0.89
CCM2-207ENST00000475551 PIP4K2BP78356 416 aa20.59■□□□□ 0.89
CCM2-207ENST00000475551 GRM8O00222 908 aa20.59■□□□□ 0.89
CCM2-207ENST00000475551 ILDR1Q86SU0 546 aaPredicted RBP20.59■□□□□ 0.89
CCM2-207ENST00000475551 FBXW7Q969H0 707 aa20.59■□□□□ 0.89
CCM2-207ENST00000475551 BICC1Q9H694 974 aaKnown RBP20.59■□□□□ 0.89
CCM2-207ENST00000475551 RTEL1Q9NZ71 1219 aa20.59■□□□□ 0.89
CCM2-207ENST00000475551 ROBO1Q9Y6N7 1651 aa20.58■□□□□ 0.89
CCM2-207ENST00000475551 SALL1Q9NSC2 1324 aa20.58■□□□□ 0.89
CCM2-207ENST00000475551 KCNQ3O43525 872 aa20.58■□□□□ 0.89
CCM2-207ENST00000475551 CWF19L2Q2TBE0 894 aaKnown RBP20.58■□□□□ 0.89
CCM2-207ENST00000475551 LRRFIP1Q32MZ4 808 aaKnown RBP20.58■□□□□ 0.89
CCM2-207ENST00000475551 GORABQ5T7V8 394 aa20.58■□□□□ 0.89
CCM2-207ENST00000475551 NCAPHQ15003 741 aa20.58■□□□□ 0.88
CCM2-207ENST00000475551 LGR6Q9HBX8 967 aa20.58■□□□□ 0.88
CCM2-207ENST00000475551 POLR3GO15318 223 aaPredicted RBP20.57■□□□□ 0.88
CCM2-207ENST00000475551 NLRP12P59046 1061 aa20.57■□□□□ 0.88
CCM2-207ENST00000475551 DHX32Q7L7V1 743 aaKnown RBP20.57■□□□□ 0.88
CCM2-207ENST00000475551 LINS1Q8NG48 757 aa20.57■□□□□ 0.88
CCM2-207ENST00000475551 NEDD4P46934 1319 aa20.57■□□□□ 0.88
CCM2-207ENST00000475551 A0A1B0GVL5 298 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 NDUFA8P51970 172 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 FOSBP53539 338 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 GPS2Q13227 327 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 LRRC2Q9BYS8 371 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 AGXT2Q9BYV1 514 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 TMX1Q9H3N1 280 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 ATP5JP18859 108 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 NLRP6P59044 892 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 FCHSD1Q86WN1 690 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 NEK11Q8NG66 645 aa20.56■□□□□ 0.88
CCM2-207ENST00000475551 IKBKBO14920 756 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 TBC1D8O95759 1140 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 EDC3Q96F86 508 aaKnown RBP20.55■□□□□ 0.88
CCM2-207ENST00000475551 PARP3Q9Y6F1 533 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 TRPM3Q9HCF6 1732 aaPredicted RBP20.55■□□□□ 0.88
CCM2-207ENST00000475551 URI1O94763 535 aaPredicted RBP20.55■□□□□ 0.88
CCM2-207ENST00000475551 FANCCQ00597 558 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 REXO1L1PQ8IX06 675 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 ABTB2Q8N961 1025 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 CARD6Q9BX69 1037 aa20.55■□□□□ 0.88
CCM2-207ENST00000475551 PXDNQ92626 1479 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms