RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 MED23Q9ULK4 1368 aa23.3■■□□□ 1.32
RNF220-212ENST00000475378 ANKRD18AQ8IVF6 992 aa23.3■■□□□ 1.32
RNF220-212ENST00000475378 CCDC85AQ96PX6 553 aaPredicted RBP23.3■■□□□ 1.32
RNF220-212ENST00000475378 NF2P35240 595 aa23.29■■□□□ 1.32
RNF220-212ENST00000475378 HABP4Q5JVS0 413 aaKnown RBP23.29■■□□□ 1.32
RNF220-212ENST00000475378 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
RNF220-212ENST00000475378 CCDC191Q8NCU4 936 aa23.29■■□□□ 1.32
RNF220-212ENST00000475378 MYD88Q99836 296 aa23.29■■□□□ 1.32
RNF220-212ENST00000475378 PHAXQ9H814 394 aaKnown RBP23.29■■□□□ 1.32
RNF220-212ENST00000475378 GOLGA2Q08379 1002 aa23.28■■□□□ 1.32
RNF220-212ENST00000475378 LDLRAD1Q5T700 205 aa23.28■■□□□ 1.32
RNF220-212ENST00000475378 SPRYD7Q5W111 196 aa23.28■■□□□ 1.32
RNF220-212ENST00000475378 JARID2Q92833 1246 aaPredicted RBP23.28■■□□□ 1.32
RNF220-212ENST00000475378 ECM29Q5VYK3 1845 aa23.27■■□□□ 1.32
RNF220-212ENST00000475378 MYO3BQ8WXR4 1341 aa23.27■■□□□ 1.32
RNF220-212ENST00000475378 POTEFA5A3E0 1075 aa23.26■■□□□ 1.31
RNF220-212ENST00000475378 SASH1O94885 1247 aa23.26■■□□□ 1.31
RNF220-212ENST00000475378 STRIP1Q5VSL9 837 aa23.26■■□□□ 1.31
RNF220-212ENST00000475378 ARMC9Q7Z3E5 817 aa23.26■■□□□ 1.31
RNF220-212ENST00000475378 OGFOD1Q8N543 542 aa23.26■■□□□ 1.31
RNF220-212ENST00000475378 ALDH1A1P00352 501 aa23.25■■□□□ 1.31
RNF220-212ENST00000475378 ZBED3Q96IU2 234 aaPredicted RBP23.25■■□□□ 1.31
RNF220-212ENST00000475378 CWC25Q9NXE8 425 aaPredicted RBP23.25■■□□□ 1.31
RNF220-212ENST00000475378 MINPP1Q9UNW1 487 aa23.25■■□□□ 1.31
RNF220-212ENST00000475378 MMP14P50281 582 aa23.24■■□□□ 1.31
RNF220-212ENST00000475378 PRKG1Q13976 671 aa23.24■■□□□ 1.31
RNF220-212ENST00000475378 OTOP1Q7RTM1 612 aa23.24■■□□□ 1.31
RNF220-212ENST00000475378 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
RNF220-212ENST00000475378 MBIPQ9NS73 344 aa23.24■■□□□ 1.31
RNF220-212ENST00000475378 BSDC1Q9NW68 430 aaPredicted RBP23.24■■□□□ 1.31
RNF220-212ENST00000475378 TRIM17Q9Y577 477 aa23.24■■□□□ 1.31
RNF220-212ENST00000475378 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
RNF220-212ENST00000475378 CTSWP56202 376 aa23.23■■□□□ 1.31
RNF220-212ENST00000475378 INTS3Q68E01 1043 aaKnown RBP23.23■■□□□ 1.31
RNF220-212ENST00000475378 TXNRD3Q86VQ6 643 aa23.23■■□□□ 1.31
RNF220-212ENST00000475378 APOBEC3FQ8IUX4 373 aaKnown RBP23.23■■□□□ 1.31
RNF220-212ENST00000475378 CDC5LQ99459 802 aaKnown RBP23.23■■□□□ 1.31
RNF220-212ENST00000475378 COA1Q9GZY4 146 aa23.23■■□□□ 1.31
RNF220-212ENST00000475378 RALBP1Q15311 655 aa23.22■■□□□ 1.31
RNF220-212ENST00000475378 IFNL1Q8IU54 200 aa23.22■■□□□ 1.31
RNF220-212ENST00000475378 METTL22Q9BUU2 404 aaPredicted RBP23.22■■□□□ 1.31
RNF220-212ENST00000475378 ANGEL1Q9UNK9 670 aaKnown RBP23.22■■□□□ 1.31
RNF220-212ENST00000475378 FZD1Q9UP38 647 aa23.22■■□□□ 1.31
RNF220-212ENST00000475378 COL1A1P02452 1464 aaPredicted RBP23.22■■□□□ 1.31
RNF220-212ENST00000475378 MANSC4A6NHS7 340 aaPredicted RBP23.21■■□□□ 1.31
RNF220-212ENST00000475378 ZNF853P0CG23 659 aa23.21■■□□□ 1.31
RNF220-212ENST00000475378 INHBEP58166 350 aa23.21■■□□□ 1.31
RNF220-212ENST00000475378 MAP3K11Q16584 847 aa23.21■■□□□ 1.31
RNF220-212ENST00000475378 TTLL11Q8NHH1 800 aa23.21■■□□□ 1.31
RNF220-212ENST00000475378 FBXW7Q969H0 707 aa23.21■■□□□ 1.31
RNF220-212ENST00000475378 SSC5DA1L4H1 1573 aa23.2■■□□□ 1.3
RNF220-212ENST00000475378 IGF2BP3O00425 579 aaKnown RBP eCLIP23.19■■□□□ 1.3
RNF220-212ENST00000475378 GREM2Q9H772 168 aa23.19■■□□□ 1.3
RNF220-212ENST00000475378 ZBTB48P10074 688 aaPredicted RBP23.18■■□□□ 1.3
RNF220-212ENST00000475378 TTLL5Q6EMB2 1281 aa23.18■■□□□ 1.3
RNF220-212ENST00000475378 KIAA0825Q8IV33 1275 aa23.18■■□□□ 1.3
RNF220-212ENST00000475378 WNK4Q96J92 1243 aa23.18■■□□□ 1.3
RNF220-212ENST00000475378 PTPN22Q9Y2R2 807 aa23.18■■□□□ 1.3
RNF220-212ENST00000475378 SLC10A4Q96EP9 437 aa23.17■■□□□ 1.3
RNF220-212ENST00000475378 CLMNQ96JQ2 1002 aa23.17■■□□□ 1.3
RNF220-212ENST00000475378 LEMD3Q9Y2U8 911 aa23.17■■□□□ 1.3
RNF220-212ENST00000475378 OTOFQ9HC10 1997 aa23.16■■□□□ 1.3
RNF220-212ENST00000475378 IGKV5-2P06315 115 aa23.16■■□□□ 1.3
RNF220-212ENST00000475378 KLRK1P26718 216 aa23.16■■□□□ 1.3
RNF220-212ENST00000475378 FXR1P51114 621 aaKnown RBP eCLIP23.16■■□□□ 1.3
RNF220-212ENST00000475378 ARMC5Q96C12 935 aa23.16■■□□□ 1.3
RNF220-212ENST00000475378 DEFB129Q9H1M3 183 aa23.16■■□□□ 1.3
RNF220-212ENST00000475378 A0A1B0GUL6 1792 aa23.15■■□□□ 1.3
RNF220-212ENST00000475378 ELL2O00472 640 aaPredicted RBP23.15■■□□□ 1.3
RNF220-212ENST00000475378 ERO1AQ96HE7 468 aa23.15■■□□□ 1.3
RNF220-212ENST00000475378 MAP3K2Q9Y2U5 619 aa23.15■■□□□ 1.3
RNF220-212ENST00000475378 DDX58O95786 925 aaKnown RBP23.14■■□□□ 1.29
RNF220-212ENST00000475378 CAP1Q01518 475 aa23.14■■□□□ 1.29
RNF220-212ENST00000475378 CD99L2Q8TCZ2 262 aa23.14■■□□□ 1.29
RNF220-212ENST00000475378 ZNF804BA4D1E1 1349 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 UNCXA6NJT0 531 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 EN2P19622 333 aaPredicted RBP23.13■■□□□ 1.29
RNF220-212ENST00000475378 GTF2IP78347 998 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 CRHR2Q13324 411 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 MTMR14Q8NCE2 650 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 IFT57Q9NWB7 429 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 ADAMTS8Q9UP79 889 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 CEP290O15078 2479 aa23.13■■□□□ 1.29
RNF220-212ENST00000475378 MYBBP1AQ9BQG0 1328 aaKnown RBP23.12■■□□□ 1.29
RNF220-212ENST00000475378 GJA5P36382 358 aa23.12■■□□□ 1.29
RNF220-212ENST00000475378 C8orf58Q8NAV2 365 aa23.12■■□□□ 1.29
RNF220-212ENST00000475378 PPP2R3BQ9Y5P8 575 aa23.12■■□□□ 1.29
RNF220-212ENST00000475378 PPP1R12BO60237 982 aaPredicted RBP23.11■■□□□ 1.29
RNF220-212ENST00000475378 DLGAP5Q15398 846 aa23.11■■□□□ 1.29
RNF220-212ENST00000475378 KSR2Q6VAB6 950 aa23.11■■□□□ 1.29
RNF220-212ENST00000475378 CERS5Q8N5B7 392 aa23.11■■□□□ 1.29
RNF220-212ENST00000475378 PCDHAC2Q9Y5I4 1007 aa23.11■■□□□ 1.29
RNF220-212ENST00000475378 SZT2Q5T011 3432 aa23.11■■□□□ 1.29
RNF220-212ENST00000475378 IRS2Q9Y4H2 1338 aa23.1■■□□□ 1.29
RNF220-212ENST00000475378 IGHMBP2P38935 993 aaKnown RBP23.1■■□□□ 1.29
RNF220-212ENST00000475378 WDR43Q15061 677 aaKnown RBP eCLIP23.1■■□□□ 1.29
RNF220-212ENST00000475378 PTPN18Q99952 460 aa23.1■■□□□ 1.29
RNF220-212ENST00000475378 EFCC1Q9HA90 598 aa23.1■■□□□ 1.29
RNF220-212ENST00000475378 CD209Q9NNX6 404 aa23.1■■□□□ 1.29
RNF220-212ENST00000475378 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms