RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 LSG1Q9H089 658 aaKnown RBP12.31□□□□□ -0.44
PCCB-213ENST00000475214 IL25Q9H293 177 aa12.31□□□□□ -0.44
PCCB-213ENST00000475214 UQCRFS1P1P0C7P4 283 aa12.3□□□□□ -0.44
PCCB-213ENST00000475214 GYS1P13807 737 aa12.3□□□□□ -0.44
PCCB-213ENST00000475214 HSPA4P34932 840 aa12.3□□□□□ -0.44
PCCB-213ENST00000475214 NFIXQ14938 502 aa12.3□□□□□ -0.44
PCCB-213ENST00000475214 DDX46Q7L014 1031 aaKnown RBP12.3□□□□□ -0.44
PCCB-213ENST00000475214 FAM227BQ96M60 508 aa12.3□□□□□ -0.44
PCCB-213ENST00000475214 GPBP1L1Q9HC44 474 aaPredicted RBP12.3□□□□□ -0.44
PCCB-213ENST00000475214 SNRKQ9NRH2 765 aa12.3□□□□□ -0.44
PCCB-213ENST00000475214 FGFR2P21802 821 aa12.29□□□□□ -0.44
PCCB-213ENST00000475214 FKBP4Q02790 459 aaKnown RBP eCLIP12.29□□□□□ -0.44
PCCB-213ENST00000475214 CHRNDQ07001 517 aa12.29□□□□□ -0.44
PCCB-213ENST00000475214 CNBD1Q8NA66 436 aa12.29□□□□□ -0.44
PCCB-213ENST00000475214 HELBQ8NG08 1087 aaPredicted RBP12.29□□□□□ -0.44
PCCB-213ENST00000475214 IL17RAQ96F46 866 aa12.29□□□□□ -0.44
PCCB-213ENST00000475214 BSDC1Q9NW68 430 aaPredicted RBP12.29□□□□□ -0.44
PCCB-213ENST00000475214 NDUFB9Q9Y6M9 179 aa12.29□□□□□ -0.44
PCCB-213ENST00000475214 CCDC171Q6TFL3 1326 aa12.29□□□□□ -0.44
PCCB-213ENST00000475214 A0A0D9SFI3 127 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 K7ELQ4 463 aaPredicted RBP12.28□□□□□ -0.44
PCCB-213ENST00000475214 TAF5LO75529 589 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 KCNJ4P48050 445 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 TTF1Q15361 905 aaPredicted RBP12.28□□□□□ -0.44
PCCB-213ENST00000475214 MCMDC2Q4G0Z9 681 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 C3orf67Q6ZVT6 689 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 HELLSQ9NRZ9 838 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 ARAP2Q8WZ64 1704 aa12.28□□□□□ -0.44
PCCB-213ENST00000475214 RNF113AO15541 343 aaKnown RBP12.27□□□□□ -0.45
PCCB-213ENST00000475214 ZFYP08048 801 aaPredicted RBP12.27□□□□□ -0.45
PCCB-213ENST00000475214 HSPA6P17066 643 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.45
PCCB-213ENST00000475214 ZAP70P43403 619 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 MCM2P49736 904 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 RPS8P62241 208 aaKnown RBP12.27□□□□□ -0.45
PCCB-213ENST00000475214 ST5P78524 1137 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 MAP4K1Q92918 833 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.27□□□□□ -0.451e-6■■■□□ 18.1
PCCB-213ENST00000475214 PALD1Q9ULE6 856 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 MED23Q9ULK4 1368 aa12.27□□□□□ -0.45
PCCB-213ENST00000475214 SERPINB2P05120 415 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 HSP90AA1P07900 732 aaKnown RBP12.26□□□□□ -0.45
PCCB-213ENST00000475214 ZKSCAN1P17029 563 aaPredicted RBP12.26□□□□□ -0.45
PCCB-213ENST00000475214 TM4SF1P30408 202 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 NEK4P51957 841 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 PTH1RQ03431 593 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 UBE4AQ14139 1066 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 RNF20Q5VTR2 975 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 ZSCAN25Q6NSZ9 544 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 ZNF526Q8TF50 670 aaPredicted RBP12.26□□□□□ -0.45
PCCB-213ENST00000475214 CELF1Q92879 486 aaKnown RBP12.26□□□□□ -0.45
PCCB-213ENST00000475214 ANKRD2Q9GZV1 360 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 ANTXR1Q9H6X2 564 aa12.26□□□□□ -0.45
PCCB-213ENST00000475214 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
PCCB-213ENST00000475214 MCAMP43121 646 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 PHKA1P46020 1223 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 SCARF1Q14162 830 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 ZMYM1Q5SVZ6 1142 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 PRR5LQ6MZQ0 368 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 SLKQ9H2G2 1235 aaPredicted RBP12.25□□□□□ -0.45
PCCB-213ENST00000475214 MINPP1Q9UNW1 487 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 BCS1LQ9Y276 419 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
PCCB-213ENST00000475214 C10orf71Q711Q0 1435 aa12.25□□□□□ -0.45
PCCB-213ENST00000475214 A0A0G2JLW4 131 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 CD2BP2O95400 341 aaKnown RBP12.24□□□□□ -0.45
PCCB-213ENST00000475214 NECTIN1Q15223 517 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 CAVIN4Q5BKX8 364 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 PRPF40BQ6NWY9 871 aaKnown RBP12.24□□□□□ -0.45
PCCB-213ENST00000475214 ZNF589Q86UQ0 364 aaPredicted RBP12.24□□□□□ -0.45
PCCB-213ENST00000475214 RPGRQ92834 1020 aaKnown RBP12.24□□□□□ -0.45
PCCB-213ENST00000475214 KCNB2Q92953 911 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 GNL3LQ9NVN8 582 aaKnown RBP12.24□□□□□ -0.45
PCCB-213ENST00000475214 HMG20BQ9P0W2 317 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 PIM2Q9P1W9 311 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
PCCB-213ENST00000475214 AKAP11Q9UKA4 1901 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 TAF1P21675 1872 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 KIF13BQ9NQT8 1826 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 POLRMTO00411 1230 aaKnown RBP12.23□□□□□ -0.45
PCCB-213ENST00000475214 KIF3CO14782 793 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 PSMA5P28066 241 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 GRAPQ13588 217 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 WASHC4Q2M389 1173 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 CREB3L3Q68CJ9 461 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 SPATA5Q8NB90 893 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 GRAPLQ8TC17 118 aaPredicted RBP12.23□□□□□ -0.45
PCCB-213ENST00000475214 RBM17Q96I25 401 aaKnown RBP12.23□□□□□ -0.45
PCCB-213ENST00000475214 SEC62Q99442 399 aaKnown RBP12.23□□□□□ -0.45
PCCB-213ENST00000475214 ANP32EQ9BTT0 268 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 A0A1B0GUL6 1792 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 KIAA1551Q9HCM1 1747 aa12.23□□□□□ -0.45
PCCB-213ENST00000475214 TNRC6CQ9HCJ0 1690 aaKnown RBP12.22□□□□□ -0.45
PCCB-213ENST00000475214 MYH7P12883 1935 aa12.22□□□□□ -0.45
PCCB-213ENST00000475214 SNAP23O00161 211 aa12.22□□□□□ -0.45
PCCB-213ENST00000475214 SLC27A2O14975 620 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms