RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 ZHX1Q9UKY1 873 aaPredicted RBP25.1■■□□□ 1.61
SH3D21-202ENST00000474766 LIMCH1Q9UPQ0 1083 aa25.1■■□□□ 1.61
SH3D21-202ENST00000474766 ZNF330Q9Y3S2 320 aaPredicted RBP25.1■■□□□ 1.61
SH3D21-202ENST00000474766 IL6STP40189 918 aaPredicted RBP25.09■■□□□ 1.61
SH3D21-202ENST00000474766 CCDC8Q9H0W5 538 aaPredicted RBP25.09■■□□□ 1.61
SH3D21-202ENST00000474766 COPRSQ9NQ92 184 aa25.09■■□□□ 1.61
SH3D21-202ENST00000474766 ANKRD7Q92527 254 aa25.08■■□□□ 1.61
SH3D21-202ENST00000474766 TLR7Q9NYK1 1049 aaKnown RBP25.08■■□□□ 1.61
SH3D21-202ENST00000474766 ATP6V1DQ9Y5K8 247 aa25.08■■□□□ 1.61
SH3D21-202ENST00000474766 NECTIN1Q15223 517 aa25.08■■□□□ 1.61
SH3D21-202ENST00000474766 FUCA2Q9BTY2 467 aa25.08■■□□□ 1.61
SH3D21-202ENST00000474766 CCDC171Q6TFL3 1326 aa25.08■■□□□ 1.6
SH3D21-202ENST00000474766 HCLS1P14317 486 aaPredicted RBP25.07■■□□□ 1.6
SH3D21-202ENST00000474766 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
SH3D21-202ENST00000474766 SIL1Q9H173 461 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 GDPD2Q9HCC8 539 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 SCN7AQ01118 1682 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 GYS1P13807 737 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 RFX5P48382 616 aaPredicted RBP25.07■■□□□ 1.6
SH3D21-202ENST00000474766 PDCL2Q8N4E4 241 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 KLHDC4Q8TBB5 520 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 ZSWIM6Q9HCJ5 1215 aa25.07■■□□□ 1.6
SH3D21-202ENST00000474766 CTIFO43310 598 aaKnown RBP25.06■■□□□ 1.6
SH3D21-202ENST00000474766 CASTP20810 708 aaKnown RBP25.06■■□□□ 1.6
SH3D21-202ENST00000474766 VPS53Q5VIR6 699 aa25.06■■□□□ 1.6
SH3D21-202ENST00000474766 BCORQ6W2J9 1755 aa25.06■■□□□ 1.6
SH3D21-202ENST00000474766 ARFGEF2Q9Y6D5 1785 aa25.06■■□□□ 1.6
SH3D21-202ENST00000474766 GOLGA6L6A8MZA4 724 aa25.05■■□□□ 1.6
SH3D21-202ENST00000474766 ZSCAN22P10073 491 aaPredicted RBP25.05■■□□□ 1.6
SH3D21-202ENST00000474766 CBX1P83916 185 aa25.05■■□□□ 1.6
SH3D21-202ENST00000474766 PRPF40BQ6NWY9 871 aaKnown RBP25.05■■□□□ 1.6
SH3D21-202ENST00000474766 MAP4K1Q92918 833 aa25.05■■□□□ 1.6
SH3D21-202ENST00000474766 NMIQ13287 307 aaPredicted RBP25.05■■□□□ 1.6
SH3D21-202ENST00000474766 ATP2B3Q16720 1220 aa25.05■■□□□ 1.6
SH3D21-202ENST00000474766 TSC1Q92574 1164 aa25.05■■□□□ 1.6
SH3D21-202ENST00000474766 FEZ1Q99689 392 aa25.05■■□□□ 1.6
SH3D21-202ENST00000474766 SYCP1Q15431 976 aa25.04■■□□□ 1.6
SH3D21-202ENST00000474766 USPL1Q5W0Q7 1092 aa25.04■■□□□ 1.6
SH3D21-202ENST00000474766 PLBD2Q8NHP8 589 aa25.04■■□□□ 1.6
SH3D21-202ENST00000474766 FAM227BQ96M60 508 aa25.04■■□□□ 1.6
SH3D21-202ENST00000474766 NARFQ9UHQ1 456 aa25.04■■□□□ 1.6
SH3D21-202ENST00000474766 TBC1D2BQ9UPU7 963 aa25.04■■□□□ 1.6
SH3D21-202ENST00000474766 AFDNP55196 1824 aaKnown RBP25.04■■□□□ 1.6
SH3D21-202ENST00000474766 PTPN12Q05209 780 aaKnown RBP25.03■■□□□ 1.6
SH3D21-202ENST00000474766 ADCK5Q3MIX3 580 aa25.03■■□□□ 1.6
SH3D21-202ENST00000474766 JARID2Q92833 1246 aaPredicted RBP25.03■■□□□ 1.6
SH3D21-202ENST00000474766 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.03■■□□□ 1.6
SH3D21-202ENST00000474766 CASP7P55210 303 aa25.03■■□□□ 1.6
SH3D21-202ENST00000474766 JAKMIP1Q96N16 626 aaKnown RBP25.03■■□□□ 1.6
SH3D21-202ENST00000474766 A0A0U1RQG5 324 aaPredicted RBP25.02■■□□□ 1.6
SH3D21-202ENST00000474766 ZPR1O75312 459 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 BOLA2Q9H3K6 86 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 RBM8AQ9Y5S9 174 aaKnown RBP25.02■■□□□ 1.6
SH3D21-202ENST00000474766 A0A087WZG4 1122 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 CPA1P15085 419 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 TTLL7Q6ZT98 887 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 UBE3BQ7Z3V4 1068 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 PDRG1Q9NUG6 133 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 CNPY2Q9Y2B0 182 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 CYP46A1Q9Y6A2 500 aa25.02■■□□□ 1.6
SH3D21-202ENST00000474766 ZKSCAN1P17029 563 aaPredicted RBP25.01■■□□□ 1.59
SH3D21-202ENST00000474766 CREB3L3Q68CJ9 461 aa25.01■■□□□ 1.59
SH3D21-202ENST00000474766 C17orf53Q8N3J3 647 aaPredicted RBP25.01■■□□□ 1.59
SH3D21-202ENST00000474766 ZSCAN31Q96LW9 406 aaPredicted RBP25.01■■□□□ 1.59
SH3D21-202ENST00000474766 MED23Q9ULK4 1368 aa25.01■■□□□ 1.59
SH3D21-202ENST00000474766 DZIP3Q86Y13 1208 aaKnown RBP25■■□□□ 1.59
SH3D21-202ENST00000474766 A0A0D9SFI3 127 aa25■■□□□ 1.59
SH3D21-202ENST00000474766 RIOK3O14730 519 aaKnown RBP25■■□□□ 1.59
SH3D21-202ENST00000474766 STX6O43752 255 aa25■■□□□ 1.59
SH3D21-202ENST00000474766 CAMTA2O94983 1202 aa25■■□□□ 1.59
SH3D21-202ENST00000474766 ATP5JP18859 108 aa25■■□□□ 1.59
SH3D21-202ENST00000474766 POLD1P28340 1107 aa25■■□□□ 1.59
SH3D21-202ENST00000474766 FSD1Q9BTV5 496 aa25■■□□□ 1.59
SH3D21-202ENST00000474766 SH2B1Q9NRF2 756 aaPredicted RBP25■■□□□ 1.59
SH3D21-202ENST00000474766 TNNI3KQ59H18 835 aa24.99■■□□□ 1.59
SH3D21-202ENST00000474766 NLGN1Q8N2Q7 840 aa24.99■■□□□ 1.59
SH3D21-202ENST00000474766 KCNF1Q9H3M0 494 aa24.99■■□□□ 1.59
SH3D21-202ENST00000474766 FPGT-TNNI3KV9GXZ4 949 aa24.99■■□□□ 1.59
SH3D21-202ENST00000474766 TCHHQ07283 1943 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 ATP5J2-PTCD1G3V325 749 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 LARGE1O95461 756 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 F13A1P00488 732 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 MPNDQ8N594 471 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 LARP6Q9BRS8 491 aaKnown RBP24.98■■□□□ 1.59
SH3D21-202ENST00000474766 DBNLQ9UJU6 430 aaKnown RBP24.98■■□□□ 1.59
SH3D21-202ENST00000474766 MMP10P09238 476 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 SYT1P21579 422 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 TAF3Q5VWG9 929 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 SMC3Q9UQE7 1217 aa24.98■■□□□ 1.59
SH3D21-202ENST00000474766 SLC27A2O14975 620 aa24.97■■□□□ 1.59
SH3D21-202ENST00000474766 TFCP2Q12800 502 aa24.97■■□□□ 1.59
SH3D21-202ENST00000474766 FOXD4L6Q3SYB3 417 aaPredicted RBP24.97■■□□□ 1.59
SH3D21-202ENST00000474766 FOXD4L3Q6VB84 417 aaPredicted RBP24.97■■□□□ 1.59
SH3D21-202ENST00000474766 PPP1R1BQ9UD71 204 aaPredicted RBP24.97■■□□□ 1.59
SH3D21-202ENST00000474766 PYCARDQ9ULZ3 195 aa24.96■■□□□ 1.59
SH3D21-202ENST00000474766 H7C1W4 665 aa24.96■■□□□ 1.59
SH3D21-202ENST00000474766 RFX7Q2KHR2 1363 aa24.95■■□□□ 1.59
SH3D21-202ENST00000474766 CCDC192P0DO97 292 aa24.95■■□□□ 1.58
SH3D21-202ENST00000474766 PSMA5P28066 241 aa24.95■■□□□ 1.58
SH3D21-202ENST00000474766 NUP98P52948 1817 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms