RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 OSBPL5Q9H0X9 879 aaPredicted RBP9.38□□□□□ -0.91
CCDC93-208ENST00000474546 GDPD2Q9HCC8 539 aa9.38□□□□□ -0.91
CCDC93-208ENST00000474546 ZHX1Q9UKY1 873 aaPredicted RBP9.38□□□□□ -0.91
CCDC93-208ENST00000474546 PYCARDQ9ULZ3 195 aa9.38□□□□□ -0.91
CCDC93-208ENST00000474546 PHF8Q9UPP1 1060 aa9.38□□□□□ -0.91
CCDC93-208ENST00000474546 LRRFIP2Q9Y608 721 aaKnown RBP9.38□□□□□ -0.91
CCDC93-208ENST00000474546 COL6A3P12111 3177 aa9.38□□□□□ -0.91
CCDC93-208ENST00000474546 SRGAP3O43295 1099 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 CBFA2T2O43439 604 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 PTGS1P23219 599 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 VEGFBP49765 207 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 OS9Q13438 667 aaPredicted RBP9.37□□□□□ -0.91
CCDC93-208ENST00000474546 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 LRRFIP1Q32MZ4 808 aaKnown RBP9.37□□□□□ -0.91
CCDC93-208ENST00000474546 ANO6Q4KMQ2 910 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 MCM10Q7L590 875 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 CCDC83Q8IWF9 413 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 USP44Q9H0E7 712 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 DACT1Q9NYF0 836 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 FAM53CQ9NYF3 392 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 TFCP2L1Q9NZI6 479 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 ANKARQ7Z5J8 1434 aa9.37□□□□□ -0.91
CCDC93-208ENST00000474546 PHLPP2Q6ZVD8 1323 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 PNMA6EA0A0J9YXQ4 647 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 H3BQV1 296 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 POTEB2H3BUK9 544 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 DDX58O95786 925 aaKnown RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 VEGFAP15692 232 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 RPS6KB1P23443 525 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 U2AF2P26368 475 aaKnown RBP eCLIP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 HDGFL1Q5TGJ6 251 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 NOL8Q76FK4 1167 aaKnown RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 PPP1R42Q7Z4L9 355 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 SPC24Q8NBT2 197 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 LEO1Q8WVC0 666 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 C16orf45Q96MC5 204 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 ZNF830Q96NB3 372 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 L2HGDHQ9H9P8 463 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 U3KPZ7 1027 aaPredicted RBP9.36□□□□□ -0.91
CCDC93-208ENST00000474546 ALS2Q96Q42 1657 aa9.36□□□□□ -0.91
CCDC93-208ENST00000474546 A0A1W2PQ27 194 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 A0A1W2PQ64 194 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 A0A1W2PQD8 194 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 ZSCAN12O43309 604 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 DHX16O60231 1041 aaKnown RBP9.35□□□□□ -0.91
CCDC93-208ENST00000474546 SKILP12757 684 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 FAM160A1Q05DH4 1040 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 DCTN1Q14203 1278 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 RRS1Q15050 365 aaKnown RBP9.35□□□□□ -0.91
CCDC93-208ENST00000474546 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 LARP1Q6PKG0 1096 aaKnown RBP9.35□□□□□ -0.91
CCDC93-208ENST00000474546 TTC6Q86TZ1 520 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 MSL3Q8N5Y2 521 aaKnown RBP9.35□□□□□ -0.91
CCDC93-208ENST00000474546 DNAAF4Q8WXU2 420 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 AK7Q96M32 723 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 BEGAINQ9BUH8 593 aa9.35□□□□□ -0.91
CCDC93-208ENST00000474546 SFPQP23246 707 aaKnown RBP eCLIP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 SNW1Q13573 536 aaKnown RBP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 MTHFSDQ2M296 383 aaKnown RBP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 NOM1Q5C9Z4 860 aaKnown RBP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 C9orf131Q5VYM1 1079 aa9.34□□□□□ -0.91
CCDC93-208ENST00000474546 TMCO3Q6UWJ1 677 aa9.34□□□□□ -0.91
CCDC93-208ENST00000474546 CWC27Q6UX04 472 aaKnown RBP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 CCAR2Q8N163 923 aaKnown RBP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 RGPD8O14715 1765 aaPredicted RBP9.34□□□□□ -0.91
CCDC93-208ENST00000474546 EFCAB8A8MWE9 144 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 F6X3S4 739 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 SLFN14P0C7P3 912 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 AMPHP49418 695 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 SOX10P56693 466 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 FGD1P98174 961 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 G3BP1Q13283 466 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC93-208ENST00000474546 CHRNA2Q15822 529 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 ME3Q16798 604 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 MUM1L1Q5H9M0 696 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 SLC27A3Q5K4L6 730 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 USPL1Q5W0Q7 1092 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 PRPF40BQ6NWY9 871 aaKnown RBP9.33□□□□□ -0.92
CCDC93-208ENST00000474546 ARHGAP27Q6ZUM4 889 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 LUZP1Q86V48 1076 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 GOLGA6L1Q8N7Z2 621 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 KCNG4Q8TDN1 519 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 GTF3C6Q969F1 213 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 CCDC34Q96HJ3 373 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 MPHOSPH8Q99549 860 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 ACBD3Q9H3P7 528 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 DBF4Q9UBU7 674 aaPredicted RBP9.33□□□□□ -0.92
CCDC93-208ENST00000474546 HOOK1Q9UJC3 728 aaKnown RBP9.33□□□□□ -0.92
CCDC93-208ENST00000474546 RCOR1Q9UKL0 485 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 RBM8AQ9Y5S9 174 aaKnown RBP9.33□□□□□ -0.92
CCDC93-208ENST00000474546 TRPM3Q9HCF6 1732 aaPredicted RBP9.33□□□□□ -0.92
CCDC93-208ENST00000474546 MRC1P22897 1456 aa9.33□□□□□ -0.92
CCDC93-208ENST00000474546 MAP3K19Q56UN5 1328 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 CCDC69A6NI79 296 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 SPDYE4A6NLX3 237 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 IKBKBO14920 756 aa9.32□□□□□ -0.92
CCDC93-208ENST00000474546 H2AFXP16104 143 aaPredicted RBP9.32□□□□□ -0.92
CCDC93-208ENST00000474546 IQCB1Q15051 598 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms