RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 MICALL2Q8IY33 904 aa11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 DPF2Q92785 391 aa11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 GLIS2Q9BZE0 524 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 SALL2Q9Y467 1007 aaPredicted RBP11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 THSD7BQ9C0I4 1608 aa11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 SCN9AQ15858 1988 aa11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 WDR33Q9C0J8 1336 aaKnown RBP11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 MYH3P11055 1940 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 H7C1D1 291 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 UFL1O94874 794 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 CTSWP56202 376 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 NEXNQ0ZGT2 675 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 MKRN3Q13064 507 aaKnown RBP11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 SAMD7Q7Z3H4 446 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 ZC3H15Q8WU90 426 aaKnown RBP11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 ZC3H12CQ9C0D7 883 aaKnown RBP11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 BMP2KQ9NSY1 1161 aaPredicted RBP11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 WBP1LQ9NX94 342 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 ANKIB1Q9P2G1 1089 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 GGA1Q9UJY5 639 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 TLL2Q9Y6L7 1015 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 SPEF2Q9C093 1822 aa11.25□□□□□ -0.61
TNFRSF9-202ENST00000474475 WTIPA6NIX2 430 aaPredicted RBP11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 H7C1W4 665 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 VAMP4O75379 141 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 EGFRP00533 1210 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 EXOSC9Q06265 439 aaKnown RBP11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 FLIIQ13045 1269 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 UBE3BQ7Z3V4 1068 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 WDR63Q8IWG1 891 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 DCBLD2Q96PD2 775 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 GREM2Q9H772 168 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 XDHP47989 1333 aa11.24□□□□□ -0.61
TNFRSF9-202ENST00000474475 CELF2O95319 508 aaKnown RBP11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 RPS12P25398 132 aaKnown RBP11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 GCKRQ14397 625 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 CYP4F22Q6NT55 531 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 DLK2Q6UY11 383 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 CDC37L1Q7L3B6 337 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 EFCAB3Q8N7B9 438 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 CAPNS2Q96L46 248 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 PSME4Q14997 1843 aa11.23□□□□□ -0.61
TNFRSF9-202ENST00000474475 G3V3G9 751 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 VIL1P09327 827 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 ATP2B4P23634 1241 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 CTCFP49711 727 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 CASP7P55210 303 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 GRM1Q13255 1194 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 FKBP5Q13451 457 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 RBM26Q5T8P6 1007 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 SAPCD2Q86UD0 394 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 USP48Q86UV5 1035 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 DNAAF4Q8WXU2 420 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 AIDAQ96BJ3 306 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 CDC5LQ99459 802 aaKnown RBP11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 ZNF408Q9H9D4 720 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 BSDC1Q9NW68 430 aaPredicted RBP11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 MINPP1Q9UNW1 487 aa11.22□□□□□ -0.61
TNFRSF9-202ENST00000474475 CACNA1FO60840 1977 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 ZNF609O15014 1411 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 ECE1P42892 770 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 FAM9BQ8IZU0 186 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 LINS1Q8NG48 757 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 PLA2G12BQ9BX93 195 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 PRDM10Q9NQV6 1147 aa11.21□□□□□ -0.61
TNFRSF9-202ENST00000474475 ZNF646O15015 1829 aaPredicted RBP11.21□□□□□ -0.62
TNFRSF9-202ENST00000474475 MED23Q9ULK4 1368 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 ASTN2O75129 1339 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 ADM5C9JUS6 153 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 F6X3S4 739 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 AOC2O75106 756 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 CSF1RP07333 972 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 HSPA8P11142 646 aaKnown RBP11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 LBX1P52954 281 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 MAP2K1Q02750 393 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 KIF4BQ2VIQ3 1234 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 RSBN1LQ6PCB5 846 aaPredicted RBP11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 GMLQ99445 158 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 PCNTO95613 3336 aa11.2□□□□□ -0.62
TNFRSF9-202ENST00000474475 SLC34A2O95436 690 aa11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 ITGA6P23229 1130 aa11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 CCT4P50991 539 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 ZNF280AP59817 542 aaPredicted RBP11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 KRT26Q7Z3Y9 468 aa11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 PODNQ7Z5L7 613 aa11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 AGBL3Q8NEM8 1001 aa11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 HHIPL1Q96JK4 782 aa11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 POLR2AP24928 1970 aaKnown RBP11.19□□□□□ -0.62
TNFRSF9-202ENST00000474475 USP17L3A6NCW0 530 aa11.18□□□□□ -0.62
TNFRSF9-202ENST00000474475 USP17L4A6NCW7 530 aa11.18□□□□□ -0.62
TNFRSF9-202ENST00000474475 ATMINO43313 823 aaPredicted RBP11.18□□□□□ -0.62
TNFRSF9-202ENST00000474475 MAP2K2P36507 400 aa11.18□□□□□ -0.62
TNFRSF9-202ENST00000474475 IGHMBP2P38935 993 aaKnown RBP11.18□□□□□ -0.62
TNFRSF9-202ENST00000474475 BEND3Q5T5X7 828 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms