RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 GMLQ99445 158 aa14.08□□□□□ -0.16
CKS1B-206ENST00000474215 API5Q9BZZ5 524 aaKnown RBP14.08□□□□□ -0.16
CKS1B-206ENST00000474215 BICC1Q9H694 974 aaKnown RBP14.08□□□□□ -0.16
CKS1B-206ENST00000474215 CNNM1Q9NRU3 951 aa14.08□□□□□ -0.16
CKS1B-206ENST00000474215 MKRN1Q9UHC7 482 aaKnown RBP14.08□□□□□ -0.16
CKS1B-206ENST00000474215 SNAP23O00161 211 aa14.07□□□□□ -0.16
CKS1B-206ENST00000474215 EGFRP00533 1210 aa14.07□□□□□ -0.16
CKS1B-206ENST00000474215 KLRK1P26718 216 aa14.07□□□□□ -0.16
CKS1B-206ENST00000474215 ZNF280AP59817 542 aaPredicted RBP14.07□□□□□ -0.16
CKS1B-206ENST00000474215 C15orf52Q6ZUT6 534 aaKnown RBP14.07□□□□□ -0.16
CKS1B-206ENST00000474215 CDC37L1Q7L3B6 337 aa14.07□□□□□ -0.16
CKS1B-206ENST00000474215 ANKRD44Q8N8A2 993 aa14.07□□□□□ -0.16
CKS1B-206ENST00000474215 SPEF2Q9C093 1822 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 PLIN1O60240 522 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 USP17L8P0C7I0 530 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 DACT2Q5SW24 774 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 STRIP1Q5VSL9 837 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 CST9Q5W186 159 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 ARHGAP45Q92619 1136 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 GLIS2Q9BZE0 524 aaPredicted RBP14.06□□□□□ -0.16
CKS1B-206ENST00000474215 ZNF609O15014 1411 aa14.06□□□□□ -0.16
CKS1B-206ENST00000474215 KIF4BQ2VIQ3 1234 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 TTLL5Q6EMB2 1281 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 PUS3Q9BZE2 481 aaKnown RBP14.05□□□□□ -0.16
CKS1B-206ENST00000474215 CD209Q9NNX6 404 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 RIPOR2Q9Y4F9 1068 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 IRS2Q9Y4H2 1338 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 CNTNAP1P78357 1384 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 SCN9AQ15858 1988 aa14.05□□□□□ -0.16
CKS1B-206ENST00000474215 RASSF10A6NK89 507 aa14.04□□□□□ -0.16
CKS1B-206ENST00000474215 DEFB115Q30KQ5 88 aa14.04□□□□□ -0.16
CKS1B-206ENST00000474215 USP48Q86UV5 1035 aa14.04□□□□□ -0.16
CKS1B-206ENST00000474215 FBXW7Q969H0 707 aa14.04□□□□□ -0.16
CKS1B-206ENST00000474215 DCPSQ96C86 337 aaKnown RBP14.04□□□□□ -0.16
CKS1B-206ENST00000474215 MXD3Q9BW11 206 aa14.04□□□□□ -0.16
CKS1B-206ENST00000474215 ABT1Q9ULW3 272 aaKnown RBP14.04□□□□□ -0.16
CKS1B-206ENST00000474215 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
CKS1B-206ENST00000474215 IPO8O15397 1037 aaKnown RBP14.03□□□□□ -0.16
CKS1B-206ENST00000474215 CELF2O95319 508 aaKnown RBP14.03□□□□□ -0.16
CKS1B-206ENST00000474215 UBTFL1P0CB47 393 aaPredicted RBP14.03□□□□□ -0.16
CKS1B-206ENST00000474215 VEGFBP49765 207 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 MMP14P50281 582 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 GTF2IP78347 998 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 UBE4AQ14139 1066 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 KRT26Q7Z3Y9 468 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 ZNF804AQ7Z570 1209 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 OGFOD1Q8N543 542 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 MYOZ2Q9NPC6 264 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 HDAC5Q9UQL6 1122 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 MROH5Q6ZUA9 1318 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 MYO3BQ8WXR4 1341 aa14.03□□□□□ -0.16
CKS1B-206ENST00000474215 BCAR3O75815 825 aa14.02□□□□□ -0.17
CKS1B-206ENST00000474215 IL1R1P14778 569 aa14.02□□□□□ -0.17
CKS1B-206ENST00000474215 SCARF1Q14162 830 aa14.02□□□□□ -0.17
CKS1B-206ENST00000474215 INTS3Q68E01 1043 aaKnown RBP14.02□□□□□ -0.17
CKS1B-206ENST00000474215 ASTN2O75129 1339 aaPredicted RBP14.01□□□□□ -0.17
CKS1B-206ENST00000474215 LRRC24Q50LG9 513 aa14.01□□□□□ -0.17
CKS1B-206ENST00000474215 DLK2Q6UY11 383 aa14.01□□□□□ -0.17
CKS1B-206ENST00000474215 SULF1Q8IWU6 871 aa14.01□□□□□ -0.17
CKS1B-206ENST00000474215 KLHDC4Q8TBB5 520 aa14.01□□□□□ -0.17
CKS1B-206ENST00000474215 FRAT1Q92837 279 aaPredicted RBP14.01□□□□□ -0.17
CKS1B-206ENST00000474215 GGA3Q9NZ52 723 aa14.01□□□□□ -0.17
CKS1B-206ENST00000474215 TLL2Q9Y6L7 1015 aa14.01□□□□□ -0.17
CKS1B-206ENST00000474215 PCNTO95613 3336 aa14□□□□□ -0.17
CKS1B-206ENST00000474215 SASH1O94885 1247 aa14□□□□□ -0.17
CKS1B-206ENST00000474215 HIBADHP31937 336 aaKnown RBP14□□□□□ -0.17
CKS1B-206ENST00000474215 RFX5P48382 616 aaPredicted RBP14□□□□□ -0.17
CKS1B-206ENST00000474215 METTL24Q5JXM2 366 aa14□□□□□ -0.17
CKS1B-206ENST00000474215 ANGEL2Q5VTE6 544 aaKnown RBP14□□□□□ -0.17
CKS1B-206ENST00000474215 FAM84BQ96KN1 310 aaPredicted RBP14□□□□□ -0.17
CKS1B-206ENST00000474215 ZNF408Q9H9D4 720 aa14□□□□□ -0.17
CKS1B-206ENST00000474215 ADM5C9JUS6 153 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 PDE8BO95263 885 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 TRIM27P14373 513 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 GYG1P46976 350 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 ATF7IPQ6VMQ6 1270 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 SAPCD2Q86UD0 394 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 KIAA0825Q8IV33 1275 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 MEIS3Q99687 375 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 HDAC9Q9UKV0 1011 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 PSME4Q14997 1843 aa13.99□□□□□ -0.17
CKS1B-206ENST00000474215 ZBED9Q6R2W3 1325 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 WDR33Q9C0J8 1336 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 EYA2O00167 538 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 GNAI3P08754 354 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 HSPA1AP0DMV8 641 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 HSPA1BP0DMV9 641 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 ECE1P42892 770 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 FKBP1AP62942 108 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 PTPN12Q05209 780 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 NBPF9Q3BBW0 867 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 CERS5Q8N5B7 392 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 VGLL2Q8N8G2 317 aa13.98□□□□□ -0.17
CKS1B-206ENST00000474215 TDRD7Q8NHU6 1098 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 LRRFIP2Q9Y608 721 aaKnown RBP13.98□□□□□ -0.17
CKS1B-206ENST00000474215 PITPNM2Q9BZ72 1349 aa13.97□□□□□ -0.17
CKS1B-206ENST00000474215 WNT10BO00744 389 aa13.97□□□□□ -0.17
CKS1B-206ENST00000474215 CAVIN4Q5BKX8 364 aa13.97□□□□□ -0.17
CKS1B-206ENST00000474215 CYP4F22Q6NT55 531 aa13.97□□□□□ -0.17
CKS1B-206ENST00000474215 PAXIP1Q6ZW49 1069 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms