RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 CDC37L1Q7L3B6 337 aa25.17■■□□□ 1.62
TMEM54-204ENST00000474144 USP17L1Q7RTZ2 530 aa25.17■■□□□ 1.62
TMEM54-204ENST00000474144 USP48Q86UV5 1035 aa25.17■■□□□ 1.62
TMEM54-204ENST00000474144 HELBQ8NG08 1087 aaPredicted RBP25.17■■□□□ 1.62
TMEM54-204ENST00000474144 MXD3Q9BW11 206 aa25.17■■□□□ 1.62
TMEM54-204ENST00000474144 CELF2O95319 508 aaKnown RBP25.16■■□□□ 1.62
TMEM54-204ENST00000474144 AGBL3Q8NEM8 1001 aa25.16■■□□□ 1.62
TMEM54-204ENST00000474144 GMLQ99445 158 aa25.16■■□□□ 1.62
TMEM54-204ENST00000474144 ASTN2O75129 1339 aaPredicted RBP25.15■■□□□ 1.62
TMEM54-204ENST00000474144 POLR2AP24928 1970 aaKnown RBP25.15■■□□□ 1.62
TMEM54-204ENST00000474144 CCDC57Q2TAC2 916 aa25.15■■□□□ 1.62
TMEM54-204ENST00000474144 COA1Q9GZY4 146 aa25.15■■□□□ 1.62
TMEM54-204ENST00000474144 ZNF408Q9H9D4 720 aa25.15■■□□□ 1.62
TMEM54-204ENST00000474144 UTYO14607 1347 aa25.14■■□□□ 1.62
TMEM54-204ENST00000474144 ZNF609O15014 1411 aa25.14■■□□□ 1.62
TMEM54-204ENST00000474144 KCNJ4P48050 445 aa25.14■■□□□ 1.62
TMEM54-204ENST00000474144 ZNF280AP59817 542 aaPredicted RBP25.14■■□□□ 1.62
TMEM54-204ENST00000474144 ALDH1L2Q3SY69 923 aa25.14■■□□□ 1.62
TMEM54-204ENST00000474144 FBXW7Q969H0 707 aa25.14■■□□□ 1.62
TMEM54-204ENST00000474144 DACT2Q5SW24 774 aa25.13■■□□□ 1.61
TMEM54-204ENST00000474144 COL13A1Q5TAT6 717 aaPredicted RBP25.13■■□□□ 1.61
TMEM54-204ENST00000474144 SMC4Q9NTJ3 1288 aa25.13■■□□□ 1.61
TMEM54-204ENST00000474144 TLL2Q9Y6L7 1015 aa25.13■■□□□ 1.61
TMEM54-204ENST00000474144 WDR33Q9C0J8 1336 aaKnown RBP25.12■■□□□ 1.61
TMEM54-204ENST00000474144 IRS2Q9Y4H2 1338 aa25.12■■□□□ 1.61
TMEM54-204ENST00000474144 TAF7LQ5H9L4 462 aa25.12■■□□□ 1.61
TMEM54-204ENST00000474144 LDHAL6AQ6ZMR3 332 aa25.12■■□□□ 1.61
TMEM54-204ENST00000474144 MIER1Q8N108 512 aa25.12■■□□□ 1.61
TMEM54-204ENST00000474144 ADM5C9JUS6 153 aa25.11■■□□□ 1.61
TMEM54-204ENST00000474144 USP17L8P0C7I0 530 aa25.11■■□□□ 1.61
TMEM54-204ENST00000474144 CYP4F22Q6NT55 531 aa25.11■■□□□ 1.61
TMEM54-204ENST00000474144 PAXIP1Q6ZW49 1069 aaPredicted RBP25.11■■□□□ 1.61
TMEM54-204ENST00000474144 KRT26Q7Z3Y9 468 aa25.11■■□□□ 1.61
TMEM54-204ENST00000474144 BICC1Q9H694 974 aaKnown RBP25.11■■□□□ 1.61
TMEM54-204ENST00000474144 PLIN1O60240 522 aa25.1■■□□□ 1.61
TMEM54-204ENST00000474144 SCARF1Q14162 830 aa25.1■■□□□ 1.61
TMEM54-204ENST00000474144 SAPCD2Q86UD0 394 aa25.1■■□□□ 1.61
TMEM54-204ENST00000474144 DCPSQ96C86 337 aaKnown RBP25.1■■□□□ 1.61
TMEM54-204ENST00000474144 MYOZ2Q9NPC6 264 aa25.1■■□□□ 1.61
TMEM54-204ENST00000474144 CNNM1Q9NRU3 951 aa25.1■■□□□ 1.61
TMEM54-204ENST00000474144 GGA3Q9NZ52 723 aa25.1■■□□□ 1.61
TMEM54-204ENST00000474144 GRM1Q13255 1194 aa25.09■■□□□ 1.61
TMEM54-204ENST00000474144 IFFO2Q5TF58 517 aa25.09■■□□□ 1.61
TMEM54-204ENST00000474144 STRIP1Q5VSL9 837 aa25.09■■□□□ 1.61
TMEM54-204ENST00000474144 CAPNS2Q96L46 248 aa25.09■■□□□ 1.61
TMEM54-204ENST00000474144 PUS3Q9BZE2 481 aaKnown RBP25.09■■□□□ 1.61
TMEM54-204ENST00000474144 CD209Q9NNX6 404 aa25.09■■□□□ 1.61
TMEM54-204ENST00000474144 TTLL5Q6EMB2 1281 aa25.08■■□□□ 1.61
TMEM54-204ENST00000474144 ANKRD44Q8N8A2 993 aa25.08■■□□□ 1.61
TMEM54-204ENST00000474144 USP44Q9H0E7 712 aa25.08■■□□□ 1.61
TMEM54-204ENST00000474144 FOXN1O15353 648 aa25.07■■□□□ 1.6
TMEM54-204ENST00000474144 GTF2IP78347 998 aa25.07■■□□□ 1.6
TMEM54-204ENST00000474144 RABL6Q3YEC7 729 aaPredicted RBP25.07■■□□□ 1.6
TMEM54-204ENST00000474144 ANGEL2Q5VTE6 544 aaKnown RBP25.07■■□□□ 1.6
TMEM54-204ENST00000474144 DIEXFQ68CQ4 756 aaKnown RBP25.07■■□□□ 1.6
TMEM54-204ENST00000474144 NOB1Q9ULX3 412 aaKnown RBP25.07■■□□□ 1.6
TMEM54-204ENST00000474144 C15orf52Q6ZUT6 534 aaKnown RBP25.06■■□□□ 1.6
TMEM54-204ENST00000474144 SCAF8Q9UPN6 1271 aaKnown RBP25.06■■□□□ 1.6
TMEM54-204ENST00000474144 CT47B1P0C2W7 299 aaPredicted RBP25.05■■□□□ 1.6
TMEM54-204ENST00000474144 ECE1P42892 770 aa25.04■■□□□ 1.6
TMEM54-204ENST00000474144 NBPF9Q3BBW0 867 aa25.04■■□□□ 1.6
TMEM54-204ENST00000474144 SULF1Q8IWU6 871 aa25.04■■□□□ 1.6
TMEM54-204ENST00000474144 WBP1LQ9NX94 342 aa25.04■■□□□ 1.6
TMEM54-204ENST00000474144 MYO3BQ8WXR4 1341 aa25.04■■□□□ 1.6
TMEM54-204ENST00000474144 THSD7BQ9C0I4 1608 aa25.04■■□□□ 1.6
TMEM54-204ENST00000474144 AOC2O75106 756 aa25.03■■□□□ 1.6
TMEM54-204ENST00000474144 LRRC24Q50LG9 513 aa25.03■■□□□ 1.6
TMEM54-204ENST00000474144 KIAA0825Q8IV33 1275 aa25.03■■□□□ 1.6
TMEM54-204ENST00000474144 KLHDC4Q8TBB5 520 aa25.03■■□□□ 1.6
TMEM54-204ENST00000474144 RIPOR2Q9Y4F9 1068 aa25.03■■□□□ 1.6
TMEM54-204ENST00000474144 RARSP54136 660 aaKnown RBP25.02■■□□□ 1.6
TMEM54-204ENST00000474144 IL1R1P14778 569 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 ZNF804AQ7Z570 1209 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 OGFOD1Q8N543 542 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 CERS5Q8N5B7 392 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 AIDAQ96BJ3 306 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 CDCA5Q96FF9 252 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 JAG2Q9Y219 1238 aa25.01■■□□□ 1.59
TMEM54-204ENST00000474144 SASH1O94885 1247 aa25■■□□□ 1.59
TMEM54-204ENST00000474144 BRPF1P55201 1214 aaPredicted RBP25■■□□□ 1.59
TMEM54-204ENST00000474144 HUNKP57058 714 aa25■■□□□ 1.59
TMEM54-204ENST00000474144 HHIPL1Q96JK4 782 aa25■■□□□ 1.59
TMEM54-204ENST00000474144 GBA2Q9HCG7 927 aaPredicted RBP25■■□□□ 1.59
TMEM54-204ENST00000474144 WNT10BO00744 389 aa24.99■■□□□ 1.59
TMEM54-204ENST00000474144 UBE4AQ14139 1066 aa24.99■■□□□ 1.59
TMEM54-204ENST00000474144 MROH5Q6ZUA9 1318 aa24.99■■□□□ 1.59
TMEM54-204ENST00000474144 PITPNM2Q9BZ72 1349 aa24.98■■□□□ 1.59
TMEM54-204ENST00000474144 GYG1P46976 350 aa24.98■■□□□ 1.59
TMEM54-204ENST00000474144 MAP2K1Q02750 393 aaPredicted RBP24.98■■□□□ 1.59
TMEM54-204ENST00000474144 PRAMEF18Q5VWM3 479 aa24.97■■□□□ 1.59
TMEM54-204ENST00000474144 C2orf69Q8N8R5 385 aa24.97■■□□□ 1.59
TMEM54-204ENST00000474144 API5Q9BZZ5 524 aaKnown RBP24.97■■□□□ 1.59
TMEM54-204ENST00000474144 F8W031 263 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-204ENST00000474144 RFX5P48382 616 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-204ENST00000474144 CTCFP49711 727 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-204ENST00000474144 METTL24Q5JXM2 366 aa24.96■■□□□ 1.59
TMEM54-204ENST00000474144 FAM84BQ96KN1 310 aaPredicted RBP24.96■■□□□ 1.59
TMEM54-204ENST00000474144 HDAC9Q9UKV0 1011 aa24.96■■□□□ 1.59
TMEM54-204ENST00000474144 PCDHAC2Q9Y5I4 1007 aa24.96■■□□□ 1.59
TMEM54-204ENST00000474144 MAP2K2P36507 400 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms