RNA–Protein interactions for RNA: ENST00000473996.1

PLXNB1-213, Transcript of plexin B1, humanhuman

TSL 2

Gene PLXNB1, Length 1,034 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-213ENST00000473996 PLIN1O60240 522 aa18.8■□□□□ 0.6
PLXNB1-213ENST00000473996 KCNJ4P48050 445 aa18.8■□□□□ 0.6
PLXNB1-213ENST00000473996 COL13A1Q5TAT6 717 aaPredicted RBP18.8■□□□□ 0.6
PLXNB1-213ENST00000473996 PANK1Q8TE04 598 aa18.8■□□□□ 0.6
PLXNB1-213ENST00000473996 DBNDD1Q9H9R9 158 aa18.8■□□□□ 0.6
PLXNB1-213ENST00000473996 ZBTB7BO15156 539 aaPredicted RBP18.79■□□□□ 0.6
PLXNB1-213ENST00000473996 VEGFBP49765 207 aa18.79■□□□□ 0.6
PLXNB1-213ENST00000473996 GPR101Q96P66 508 aaPredicted RBP18.79■□□□□ 0.6
PLXNB1-213ENST00000473996 ZNF804BA4D1E1 1349 aa18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 ECE2O60344 883 aa18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 TAF5LO75529 589 aa18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 DOK7Q18PE1 504 aa18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 DEFB115Q30KQ5 88 aa18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 HELBQ8NG08 1087 aaPredicted RBP18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 DPF2Q92785 391 aa18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 PUS3Q9BZE2 481 aaKnown RBP18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 CNOT7Q9UIV1 285 aaKnown RBP18.78■□□□□ 0.6
PLXNB1-213ENST00000473996 H7C1D1 291 aa18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 PSMD14O00487 310 aa18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 RFX5P48382 616 aaPredicted RBP18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 ZC3H15Q8WU90 426 aaKnown RBP18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 PGAP2Q9UHJ9 254 aa18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 ABT1Q9ULW3 272 aaKnown RBP18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 RIPOR2Q9Y4F9 1068 aa18.77■□□□□ 0.6
PLXNB1-213ENST00000473996 SCN9AQ15858 1988 aa18.77■□□□□ 0.59
PLXNB1-213ENST00000473996 MROH5Q6ZUA9 1318 aa18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 WTIPA6NIX2 430 aaPredicted RBP18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 TRAF5O00463 557 aa18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 RPS12P25398 132 aaKnown RBP18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 FMR1Q06787 632 aaKnown RBP eCLIP18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 PDE3AQ14432 1141 aa18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 MICALL2Q8IY33 904 aa18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 KLHDC4Q8TBB5 520 aa18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 TRPM4Q8TD43 1214 aa18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 ZBTB12Q9Y330 459 aaPredicted RBP18.76■□□□□ 0.59
PLXNB1-213ENST00000473996 EYA2O00167 538 aa18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 SRGAP3O43295 1099 aa18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 HIRAP54198 1017 aaPredicted RBP18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 PTPN12Q05209 780 aaKnown RBP18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 LRRC24Q50LG9 513 aa18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 METTL24Q5JXM2 366 aa18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 CHMP4BQ9H444 224 aaKnown RBP18.75■□□□□ 0.59
PLXNB1-213ENST00000473996 SHTN1A0MZ66 631 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 CST9Q5W186 159 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 PODNQ7Z5L7 613 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 FBXO3Q9UK99 471 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 DDX19BQ9UMR2 479 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 COG6Q9Y2V7 657 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 SPEF2Q9C093 1822 aa18.74■□□□□ 0.59
PLXNB1-213ENST00000473996 MTX1Q13505 466 aa18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 UBE4AQ14139 1066 aa18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 GLIS2Q9BZE0 524 aaPredicted RBP18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 COA1Q9GZY4 146 aa18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 COPRSQ9NQ92 184 aa18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 KCNQ5Q9NR82 932 aa18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 WDR33Q9C0J8 1336 aaKnown RBP18.73■□□□□ 0.59
PLXNB1-213ENST00000473996 PSME4Q14997 1843 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 MED23Q9ULK4 1368 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 SNAP23O00161 211 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 VIL1P09327 827 aaKnown RBP18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 ATP8B2P98198 1209 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 C15orf52Q6ZUT6 534 aaKnown RBP18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 CDC37L1Q7L3B6 337 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 TNS4Q8IZW8 715 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 SIL1Q9H173 461 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 TLL2Q9Y6L7 1015 aa18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 POLR2AP24928 1970 aaKnown RBP18.72■□□□□ 0.59
PLXNB1-213ENST00000473996 FOXN1O15353 648 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 CIAO1O76071 339 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 PDE8BO95263 885 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 ECE1P42892 770 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 SAMD7Q7Z3H4 446 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 TXNRD3Q86VQ6 643 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 AIDAQ96BJ3 306 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 C1orf115Q9H7X2 142 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 WBP1LQ9NX94 342 aa18.71■□□□□ 0.59
PLXNB1-213ENST00000473996 ZNF609O15014 1411 aa18.7■□□□□ 0.58
PLXNB1-213ENST00000473996 CELF2O95319 508 aaKnown RBP18.7■□□□□ 0.58
PLXNB1-213ENST00000473996 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
PLXNB1-213ENST00000473996 CAPNS2Q96L46 248 aa18.7■□□□□ 0.58
PLXNB1-213ENST00000473996 CEP126Q9P2H0 1117 aa18.7■□□□□ 0.58
PLXNB1-213ENST00000473996 PA2G4Q9UQ80 394 aaKnown RBP18.7■□□□□ 0.58
PLXNB1-213ENST00000473996 KLRK1P26718 216 aa18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 MAP2K1Q02750 393 aaPredicted RBP18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 TBC1D10BQ4KMP7 808 aaPredicted RBP18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 C20orf194Q5TEA3 1177 aa18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 ATG9AQ7Z3C6 839 aa18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 ZNF804AQ7Z570 1209 aa18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 CD209Q9NNX6 404 aa18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 THSD7BQ9C0I4 1608 aa18.69■□□□□ 0.58
PLXNB1-213ENST00000473996 PNMA6EA0A0J9YXQ4 647 aa18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 USP17L3A6NCW0 530 aa18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 USP17L4A6NCW7 530 aa18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 EGFRP00533 1210 aa18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 CTCFP49711 727 aaPredicted RBP18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 G3BP1Q13283 466 aaKnown RBP eCLIP18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 PAXIP1Q6ZW49 1069 aaPredicted RBP18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 USP17L1Q7RTZ2 530 aa18.68■□□□□ 0.58
PLXNB1-213ENST00000473996 SAPCD2Q86UD0 394 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms