RNA–Protein interactions for RNA: ENST00000473686.5

EFCAB2-208, Transcript of EF-hand calcium binding domain 2, human

TSL 5

Gene EFCAB2, Length 906 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFCAB2-208	ENST00000473686	UBE2Q2L	H0YL09	131 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	HSP90B1	P14625	803 aa	Known RBP	13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	NF2	P35240	595 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ZNF280A	P59817	542 aa	Predicted RBP	13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	CCDC152	Q4G0S7	254 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	POTEG	Q6S5H5	508 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	HYPK	Q9NX55	129 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	PODXL2	Q9NZ53	605 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	XDH	P47989	1333 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	PITPNM2	Q9BZ72	1349 aa		13.63	□□□□□ -0.23
EFCAB2-208	ENST00000473686	CHL1	O00533	1208 aa		13.62	□□□□□ -0.23
EFCAB2-208	ENST00000473686	HOXB7	P09629	217 aa		13.62	□□□□□ -0.23
EFCAB2-208	ENST00000473686	PRAMEF18	Q5VWM3	479 aa		13.62	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.62	□□□□□ -0.23
EFCAB2-208	ENST00000473686	USP17L3	A6NCW0	530 aa		13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	USP17L4	A6NCW7	530 aa		13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	USP17L1	Q7RTZ2	530 aa		13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ANKRD18A	Q8IVF6	992 aa		13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	MYD88	Q99836	296 aa		13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ZNF646	O15015	1829 aa	Predicted RBP	13.61	□□□□□ -0.23
EFCAB2-208	ENST00000473686	SREBF2	Q12772	1141 aa		13.6	□□□□□ -0.23
EFCAB2-208	ENST00000473686	PRKG1	Q13976	671 aa		13.6	□□□□□ -0.23
EFCAB2-208	ENST00000473686	DUSP27	Q5VZP5	1158 aa		13.6	□□□□□ -0.23
EFCAB2-208	ENST00000473686	OGFOD1	Q8N543	542 aa		13.6	□□□□□ -0.23
EFCAB2-208	ENST00000473686	JARID2	Q92833	1246 aa	Predicted RBP	13.6	□□□□□ -0.23
EFCAB2-208	ENST00000473686	GPR25	O00155	361 aa		13.59	□□□□□ -0.23
EFCAB2-208	ENST00000473686	PDE8A	O60658	829 aa		13.59	□□□□□ -0.23
EFCAB2-208	ENST00000473686	ATP2B4	P23634	1241 aa		13.59	□□□□□ -0.23
EFCAB2-208	ENST00000473686	WDR43	Q15061	677 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
EFCAB2-208	ENST00000473686	NBPF9	Q3BBW0	867 aa		13.59	□□□□□ -0.23
EFCAB2-208	ENST00000473686	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.59	□□□□□ -0.23
EFCAB2-208	ENST00000473686	FKTN	O75072	461 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	SASH1	O94885	1247 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	TRIM28	Q13263	835 aa	Known RBP	13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	PODN	Q7Z5L7	613 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	GML	Q99445	158 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	MXD3	Q9BW11	206 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	PHAX	Q9H814	394 aa	Known RBP	13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	CWC25	Q9NXE8	425 aa	Predicted RBP	13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	TRIM35	Q9UPQ4	493 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	MED23	Q9ULK4	1368 aa		13.58	□□□□□ -0.24
EFCAB2-208	ENST00000473686	ECM29	Q5VYK3	1845 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	PCCA	P05165	728 aa	Predicted RBP	13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	RALBP1	Q15311	655 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	ARMC9	Q7Z3E5	817 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	CCDC191	Q8NCU4	936 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	RUNDC1	Q96C34	613 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	GCC1	Q96CN9	775 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	CDC5L	Q99459	802 aa	Known RBP	13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	MBIP	Q9NS73	344 aa		13.57	□□□□□ -0.24
EFCAB2-208	ENST00000473686	ELL2	O00472	640 aa	Predicted RBP	13.56	□□□□□ -0.24
EFCAB2-208	ENST00000473686	WNT10B	O00744	389 aa		13.56	□□□□□ -0.24
EFCAB2-208	ENST00000473686	MYO3B	Q8WXR4	1341 aa		13.56	□□□□□ -0.24
EFCAB2-208	ENST00000473686	DDX58	O95786	925 aa	Known RBP	13.55	□□□□□ -0.24
EFCAB2-208	ENST00000473686	TM4SF4	P48230	202 aa		13.55	□□□□□ -0.24
EFCAB2-208	ENST00000473686	CTSW	P56202	376 aa		13.55	□□□□□ -0.24
EFCAB2-208	ENST00000473686	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.55	□□□□□ -0.24
EFCAB2-208	ENST00000473686	ANGEL1	Q9UNK9	670 aa	Known RBP	13.55	□□□□□ -0.24
EFCAB2-208	ENST00000473686	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.55	□□□□□ -0.24
EFCAB2-208	ENST00000473686	PTPN12	Q05209	780 aa	Known RBP	13.54	□□□□□ -0.24
EFCAB2-208	ENST00000473686	NOM1	Q5C9Z4	860 aa	Known RBP	13.54	□□□□□ -0.24
EFCAB2-208	ENST00000473686	DACT2	Q5SW24	774 aa		13.54	□□□□□ -0.24
EFCAB2-208	ENST00000473686	TRIM17	Q9Y577	477 aa		13.54	□□□□□ -0.24
EFCAB2-208	ENST00000473686	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.54	□□□□□ -0.24
EFCAB2-208	ENST00000473686	WTIP	A6NIX2	430 aa	Predicted RBP	13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	ALDH1A1	P00352	501 aa		13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	CCT4	P50991	539 aa	Known RBP	13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	STRIP1	Q5VSL9	837 aa		13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	KIAA0825	Q8IV33	1275 aa		13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	METTL22	Q9BUU2	404 aa	Predicted RBP	13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	R3HDML	Q9H3Y0	253 aa		13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	FZD1	Q9UP38	647 aa		13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	KIAA0100	Q14667	2235 aa	Known RBP	13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	COL1A1	P02452	1464 aa	Predicted RBP	13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	LAMB1	P07942	1786 aa		13.53	□□□□□ -0.24
EFCAB2-208	ENST00000473686	IGHMBP2	P38935	993 aa	Known RBP	13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	KCNJ4	P48050	445 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	SPRYD7	Q5W111	196 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	COA1	Q9GZY4	146 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	GREM2	Q9H772	168 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	BSDC1	Q9NW68	430 aa	Predicted RBP	13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	MINPP1	Q9UNW1	487 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	SSUH2	Q9Y2M2	353 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	MAP3K2	Q9Y2U5	619 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	CENPF	P49454	3210 aa		13.52	□□□□□ -0.25
EFCAB2-208	ENST00000473686	HTT	P42858	3142 aa		13.51	□□□□□ -0.25
EFCAB2-208	ENST00000473686	OTOF	Q9HC10	1997 aa		13.51	□□□□□ -0.25
EFCAB2-208	ENST00000473686	NEXN	Q0ZGT2	675 aa		13.51	□□□□□ -0.25
EFCAB2-208	ENST00000473686	TTLL5	Q6EMB2	1281 aa		13.51	□□□□□ -0.25
EFCAB2-208	ENST00000473686	CFHR5	Q9BXR6	569 aa		13.51	□□□□□ -0.25
EFCAB2-208	ENST00000473686	MKI67	P46013	3256 aa	Known RBP	13.51	□□□□□ -0.25
EFCAB2-208	ENST00000473686		A0A1B0GUL6	1792 aa		13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	MANSC4	A6NHS7	340 aa	Predicted RBP	13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	GTF2I	P78347	998 aa		13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	CALD1	Q05682	793 aa	Known RBP	13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	CCDC30	Q5VVM6	783 aa		13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	OTOP1	Q7RTM1	612 aa		13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	SLC10A4	Q96EP9	437 aa		13.5	□□□□□ -0.25
EFCAB2-208	ENST00000473686	IFT57	Q9NWB7	429 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 11 ms