RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 OSBPP22059 807 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 GCKRQ14397 625 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 ZKSCAN2Q63HK3 967 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 ZBTB38Q8NAP3 1195 aaPredicted RBP11.5□□□□□ -0.57
SMC4-214ENST00000472991 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 TSKSQ9UJT2 592 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 ABCC4O15439 1325 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 FER1L6Q2WGJ9 1857 aa11.5□□□□□ -0.57
SMC4-214ENST00000472991 COL4A1P02462 1669 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 A0A1B0GUL6 1792 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 GOLGB1Q14789 3259 aaKnown RBP11.49□□□□□ -0.57
SMC4-214ENST00000472991 SOWAHBA6NEL2 793 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 H0YIN7 160 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 IRS4O14654 1257 aaPredicted RBP11.49□□□□□ -0.57
SMC4-214ENST00000472991 BCAMP50895 628 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 ATF7IPQ6VMQ6 1270 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 UBE3BQ7Z3V4 1068 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 ARHGAP45Q92619 1136 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 CLUAP1Q96AJ1 413 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 CDHR2Q9BYE9 1310 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 LRRC37AA6NMS7 1700 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 SBF1O95248 1867 aa11.49□□□□□ -0.57
SMC4-214ENST00000472991 H7C1W4 665 aa11.48□□□□□ -0.57
SMC4-214ENST00000472991 SRGNP10124 158 aa11.48□□□□□ -0.57
SMC4-214ENST00000472991 KCNA3P22001 575 aa11.48□□□□□ -0.57
SMC4-214ENST00000472991 SLC10A5Q5PT55 438 aa11.48□□□□□ -0.57
SMC4-214ENST00000472991 ZNF622Q969S3 477 aaKnown RBP eCLIP11.48□□□□□ -0.57
SMC4-214ENST00000472991 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
SMC4-214ENST00000472991 PDZRN3Q9UPQ7 1066 aa11.48□□□□□ -0.57
SMC4-214ENST00000472991 KLRG2A4D1S0 409 aaPredicted RBP11.47□□□□□ -0.57
SMC4-214ENST00000472991 GRM8O00222 908 aa11.47□□□□□ -0.57
SMC4-214ENST00000472991 CCT4P50991 539 aaKnown RBP11.47□□□□□ -0.57
SMC4-214ENST00000472991 CASP7P55210 303 aa11.47□□□□□ -0.57
SMC4-214ENST00000472991 CRY2Q49AN0 593 aa11.47□□□□□ -0.57
SMC4-214ENST00000472991 IFFO2Q5TF58 517 aa11.47□□□□□ -0.57
SMC4-214ENST00000472991 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
SMC4-214ENST00000472991 C9orf78Q9NZ63 289 aaPredicted RBP11.47□□□□□ -0.57
SMC4-214ENST00000472991 DICER1Q9UPY3 1922 aaKnown RBP11.47□□□□□ -0.57
SMC4-214ENST00000472991 PLIN1O60240 522 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 PDE8AO60658 829 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 NPR1P16066 1061 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 STYK1Q6J9G0 422 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 PACS2Q86VP3 889 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 FTSJ3Q8IY81 847 aaKnown RBP11.46□□□□□ -0.57
SMC4-214ENST00000472991 MASTLQ96GX5 879 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 PIM2Q9P1W9 311 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 BCS1LQ9Y276 419 aa11.46□□□□□ -0.57
SMC4-214ENST00000472991 NBPF7P0C2Y1 421 aaPredicted RBP11.45□□□□□ -0.58
SMC4-214ENST00000472991 HSP90B1P14625 803 aaKnown RBP11.45□□□□□ -0.58
SMC4-214ENST00000472991 YBX3P16989 372 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMC4-214ENST00000472991 PRSS12P56730 875 aa11.45□□□□□ -0.58
SMC4-214ENST00000472991 DALRD3Q5D0E6 543 aaKnown RBP11.45□□□□□ -0.58
SMC4-214ENST00000472991 INTS3Q68E01 1043 aaKnown RBP11.45□□□□□ -0.58
SMC4-214ENST00000472991 DZIP1LQ8IYY4 767 aaKnown RBP11.45□□□□□ -0.58
SMC4-214ENST00000472991 TMEM57Q8N5G2 664 aa11.45□□□□□ -0.58
SMC4-214ENST00000472991 TTLL6Q8N841 843 aa11.45□□□□□ -0.58
SMC4-214ENST00000472991 FAM198AQ9UFP1 575 aa11.45□□□□□ -0.58
SMC4-214ENST00000472991 TIAM2Q8IVF5 1701 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 UTYO14607 1347 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 RLBP1P12271 317 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 CTSWP56202 376 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 SF3B3Q15393 1217 aaKnown RBP11.44□□□□□ -0.58
SMC4-214ENST00000472991 GPR162Q16538 588 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 PANK1Q8TE04 598 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 CNKSR1Q969H4 720 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 CCDC85AQ96PX6 553 aaPredicted RBP11.44□□□□□ -0.58
SMC4-214ENST00000472991 PLA2G12BQ9BX93 195 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 CDHR5Q9HBB8 845 aa11.44□□□□□ -0.58
SMC4-214ENST00000472991 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
SMC4-214ENST00000472991 HOXA10P31260 410 aaPredicted RBP11.43□□□□□ -0.58
SMC4-214ENST00000472991 CCDC152Q4G0S7 254 aa11.43□□□□□ -0.58
SMC4-214ENST00000472991 PRPF40BQ6NWY9 871 aaKnown RBP11.43□□□□□ -0.58
SMC4-214ENST00000472991 DDX46Q7L014 1031 aaKnown RBP11.43□□□□□ -0.58
SMC4-214ENST00000472991 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.43□□□□□ -0.58
SMC4-214ENST00000472991 KCNV2Q8TDN2 545 aa11.43□□□□□ -0.58
SMC4-214ENST00000472991 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
SMC4-214ENST00000472991 SUCLG2Q96I99 432 aa11.43□□□□□ -0.58
SMC4-214ENST00000472991 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
SMC4-214ENST00000472991 MEIS3Q99687 375 aa11.43□□□□□ -0.58
SMC4-214ENST00000472991 ALDH1B1P30837 517 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 FOXO4P98177 505 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 FAM161AQ3B820 660 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 ITPRIPQ8IWB1 547 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 TTLL11Q8NHH1 800 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 SEC31BQ9NQW1 1179 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 CHMP3Q9Y3E7 222 aa11.42□□□□□ -0.58
SMC4-214ENST00000472991 RTL9Q8NET4 1388 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 C21orf2O43822 256 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 UBTFL1P0CB47 393 aaPredicted RBP11.41□□□□□ -0.58
SMC4-214ENST00000472991 MS4A1P11836 297 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 RRP1P56182 461 aaKnown RBP11.41□□□□□ -0.58
SMC4-214ENST00000472991 GRAPQ13588 217 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 C20orf194Q5TEA3 1177 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 SLC51AQ86UW1 340 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 GRAPLQ8TC17 118 aaPredicted RBP11.41□□□□□ -0.58
SMC4-214ENST00000472991 CELF1Q92879 486 aaKnown RBP11.41□□□□□ -0.58
SMC4-214ENST00000472991 KAZALD1Q96I82 304 aa11.41□□□□□ -0.58
SMC4-214ENST00000472991 BICC1Q9H694 974 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms