RNA–Protein interactions for RNA: ENST00000472961.1

CFHR1-204, Transcript of complement factor H related 1, humanhuman

TSL 1 (best)

Gene CFHR1, Length 399 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR1-204ENST00000472961 RBM27Q9P2N5 1060 aaKnown RBP8.2□□□□□ -1.1
CFHR1-204ENST00000472961 PTPRFP10586 1907 aa8.19□□□□□ -1.1
CFHR1-204ENST00000472961 ATP5J2-PTCD1G3V325 749 aa8.19□□□□□ -1.1
CFHR1-204ENST00000472961 CRHR2Q13324 411 aa8.19□□□□□ -1.1
CFHR1-204ENST00000472961 TXNRD3Q86VQ6 643 aa8.19□□□□□ -1.1
CFHR1-204ENST00000472961 IFNL1Q8IU54 200 aa8.19□□□□□ -1.1
CFHR1-204ENST00000472961 AGBL3Q8NEM8 1001 aa8.19□□□□□ -1.1
CFHR1-204ENST00000472961 CCER1Q8TC90 406 aaPredicted RBP8.19□□□□□ -1.1
CFHR1-204ENST00000472961 UFL1O94874 794 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 USP17L8P0C7I0 530 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 KLRK1P26718 216 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 DACT2Q5SW24 774 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 CHRDL2Q6WN34 429 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 TMC4Q7Z404 712 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 JARID2Q92833 1246 aaPredicted RBP8.18□□□□□ -1.1
CFHR1-204ENST00000472961 AK9Q5TCS8 1911 aa8.18□□□□□ -1.1
CFHR1-204ENST00000472961 RPS8P62241 208 aaKnown RBP8.17□□□□□ -1.1
CFHR1-204ENST00000472961 NFE2L2Q16236 605 aa8.17□□□□□ -1.1
CFHR1-204ENST00000472961 CDAN1Q8IWY9 1227 aa8.17□□□□□ -1.1
CFHR1-204ENST00000472961 WNK4Q96J92 1243 aa8.17□□□□□ -1.1
CFHR1-204ENST00000472961 TMX4Q9H1E5 349 aaPredicted RBP8.17□□□□□ -1.1
CFHR1-204ENST00000472961 CHPF2Q9P2E5 772 aa8.17□□□□□ -1.1
CFHR1-204ENST00000472961 PTCH2Q9Y6C5 1203 aa8.17□□□□□ -1.1
CFHR1-204ENST00000472961 CTGFP29279 349 aa8.16□□□□□ -1.1
CFHR1-204ENST00000472961 SREBF2Q12772 1141 aa8.16□□□□□ -1.1
CFHR1-204ENST00000472961 TTLL12Q14166 644 aaPredicted RBP8.16□□□□□ -1.1
CFHR1-204ENST00000472961 INTS3Q68E01 1043 aaKnown RBP8.16□□□□□ -1.1
CFHR1-204ENST00000472961 UBE2Q1Q7Z7E8 422 aa8.16□□□□□ -1.1
CFHR1-204ENST00000472961 PNISRQ8TF01 805 aaKnown RBP8.16□□□□□ -1.1
CFHR1-204ENST00000472961 PHIPQ8WWQ0 1821 aa8.16□□□□□ -1.1
CFHR1-204ENST00000472961 CNKSR2Q8WXI2 1034 aa8.16□□□□□ -1.1
CFHR1-204ENST00000472961 CCDC85AQ96PX6 553 aaPredicted RBP8.16□□□□□ -1.1
CFHR1-204ENST00000472961 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
CFHR1-204ENST00000472961 ARHGAP39Q9C0H5 1083 aa8.16□□□□□ -1.1
CFHR1-204ENST00000472961 ANGEL1Q9UNK9 670 aaKnown RBP8.16□□□□□ -1.1
CFHR1-204ENST00000472961 CLSPNQ9HAW4 1339 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 IRS2Q9Y4H2 1338 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 USP17L3A6NCW0 530 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 USP17L4A6NCW7 530 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 IRS4O14654 1257 aaPredicted RBP8.15□□□□□ -1.1
CFHR1-204ENST00000472961 MYCP01106 439 aaPredicted RBP8.15□□□□□ -1.1
CFHR1-204ENST00000472961 MAP3K11Q16584 847 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 USP17L1Q7RTZ2 530 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 CERS5Q8N5B7 392 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 LRCH3Q96II8 777 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 EYA3Q99504 573 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.15□□□□□ -1.1
CFHR1-204ENST00000472961 TSPYL4Q9UJ04 414 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 GGA1Q9UJY5 639 aa8.15□□□□□ -1.1
CFHR1-204ENST00000472961 PLXNB2O15031 1838 aa8.15□□□□□ -1.11
CFHR1-204ENST00000472961 FRMPD3Q5JV73 1810 aa8.15□□□□□ -1.11
CFHR1-204ENST00000472961 COL1A1P02452 1464 aaPredicted RBP8.14□□□□□ -1.11
CFHR1-204ENST00000472961 MED23Q9ULK4 1368 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 MYH13Q9UKX3 1938 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
CFHR1-204ENST00000472961 MTFR1Q15390 333 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 HSP90AB3PQ58FF7 597 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 SLC17A8Q8NDX2 589 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 PLBD2Q8NHP8 589 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 SH3TC2Q8TF17 1288 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 MS4A4AQ96JQ5 239 aa8.14□□□□□ -1.11
CFHR1-204ENST00000472961 DDX60LQ5H9U9 1706 aaKnown RBP8.14□□□□□ -1.11
CFHR1-204ENST00000472961 MANSC4A6NHS7 340 aaPredicted RBP8.13□□□□□ -1.11
CFHR1-204ENST00000472961 USP2O75604 605 aaPredicted RBP8.13□□□□□ -1.11
CFHR1-204ENST00000472961 CFAP53Q96M91 514 aa8.13□□□□□ -1.11
CFHR1-204ENST00000472961 EFCC1Q9HA90 598 aa8.13□□□□□ -1.11
CFHR1-204ENST00000472961 ANKIB1Q9P2G1 1089 aa8.13□□□□□ -1.11
CFHR1-204ENST00000472961 NUDCQ9Y266 331 aa8.13□□□□□ -1.11
CFHR1-204ENST00000472961 XDHP47989 1333 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 SNAP23O00161 211 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 ZBTB48P10074 688 aaPredicted RBP8.12□□□□□ -1.11
CFHR1-204ENST00000472961 SP3Q02447 781 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 TRIM28Q13263 835 aaKnown RBP8.12□□□□□ -1.11
CFHR1-204ENST00000472961 NBPF12Q5TAG4 269 aaPredicted RBP8.12□□□□□ -1.11
CFHR1-204ENST00000472961 ANKRD13DQ6ZTN6 518 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 PODNQ7Z5L7 613 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 KIAA0825Q8IV33 1275 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 FAM43AQ8N2R8 423 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 BRI3BPQ8WY22 251 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 ERO1AQ96HE7 468 aa8.12□□□□□ -1.11
CFHR1-204ENST00000472961 ALDH1A1P00352 501 aa8.11□□□□□ -1.11
CFHR1-204ENST00000472961 ARMC9Q7Z3E5 817 aa8.11□□□□□ -1.11
CFHR1-204ENST00000472961 DEFB129Q9H1M3 183 aa8.11□□□□□ -1.11
CFHR1-204ENST00000472961 PHAXQ9H814 394 aaKnown RBP8.11□□□□□ -1.11
CFHR1-204ENST00000472961 MINPP1Q9UNW1 487 aa8.11□□□□□ -1.11
CFHR1-204ENST00000472961 TRIM35Q9UPQ4 493 aa8.11□□□□□ -1.11
CFHR1-204ENST00000472961 CLRN2A0PK11 232 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 CHL1O00533 1208 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 SLC9C1Q4G0N8 1177 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 STRIP1Q5VSL9 837 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.1□□□□□ -1.11
CFHR1-204ENST00000472961 APOBEC3FQ8IUX4 373 aaKnown RBP8.1□□□□□ -1.11
CFHR1-204ENST00000472961 ZBTB38Q8NAP3 1195 aaPredicted RBP8.1□□□□□ -1.11
CFHR1-204ENST00000472961 SLC10A4Q96EP9 437 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 PRMT6Q96LA8 375 aaPredicted RBP8.1□□□□□ -1.11
CFHR1-204ENST00000472961 TEPSINQ96N21 525 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 GREM2Q9H772 168 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 DOCK2Q92608 1830 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 CACNA1FO60840 1977 aa8.1□□□□□ -1.11
CFHR1-204ENST00000472961 ZNF804BA4D1E1 1349 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms