RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 UBN2Q6ZU65 1347 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 ZNF609O15014 1411 aa15.64■□□□□ 0.09
SCAMP4-207ENST00000472442 GOLGA6L6A8MZA4 724 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 DNM1Q05193 864 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 PRPF40BQ6NWY9 871 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 C8orf37Q96NL8 207 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 PTGS1P23219 599 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 CRKLP46109 303 aaKnown RBP15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 ADCK5Q3MIX3 580 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 RUFY3Q7L099 469 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 A0A1B0GUL7 405 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 ZNF34Q8IZ26 560 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 TTLL11Q8NHH1 800 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 CCDC87Q9NVE4 849 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 ATP6V1DQ9Y5K8 247 aa15.63■□□□□ 0.09
SCAMP4-207ENST00000472442 CPA1P15085 419 aa15.62■□□□□ 0.09
SCAMP4-207ENST00000472442 DDX46Q7L014 1031 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-207ENST00000472442 RBM8AQ9Y5S9 174 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-207ENST00000472442 NCBP1Q09161 790 aaKnown RBP15.62■□□□□ 0.09
SCAMP4-207ENST00000472442 GREM2Q9H772 168 aa15.62■□□□□ 0.09
SCAMP4-207ENST00000472442 PALLDQ8WX93 1383 aa15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 IFIT5Q13325 482 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 NGLY1Q96IV0 654 aa15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 TRMT112Q9UI30 125 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 LIMCH1Q9UPQ0 1083 aa15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 MYH14Q7Z406 1995 aaKnown RBP15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 LARGE1O95461 756 aa15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 CCDC192P0DO97 292 aa15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 JCADQ9P266 1359 aa15.61■□□□□ 0.09
SCAMP4-207ENST00000472442 IRS4O14654 1257 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 CTSWP56202 376 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 COL9A3Q14050 684 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 VPS72Q15906 364 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 CREB3L3Q68CJ9 461 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 CEP126Q9P2H0 1117 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 FBXO3Q9UK99 471 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 CASTP20810 708 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 SEC62Q99442 399 aaKnown RBP15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 RREB1Q92766 1687 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 TAF5LO75529 589 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 ITGA6P23229 1130 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 GJB2P29033 226 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 CCDC83Q8IWF9 413 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 KBTBD3Q8NAB2 608 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 C16orf45Q96MC5 204 aaPredicted RBP15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 TAF6LQ9Y6J9 622 aa15.6■□□□□ 0.09
SCAMP4-207ENST00000472442 RFX7Q2KHR2 1363 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 CICQ96RK0 1608 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 FEZ1Q99689 392 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 MTMR6Q9Y217 621 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 RIPOR2Q9Y4F9 1068 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 GOLIM4O00461 696 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 SLC27A2O14975 620 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 ADORA1P30542 326 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 LRMPQ12912 555 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 SLFNL1Q499Z3 407 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 FNBP4Q8N3X1 1017 aaPredicted RBP15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 FAM200AQ8TCP9 573 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 JAKMIP1Q96N16 626 aaKnown RBP15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 ZSWIM6Q9HCJ5 1215 aa15.59■□□□□ 0.09
SCAMP4-207ENST00000472442 RIC1Q4ADV7 1423 aa15.58■□□□□ 0.09
SCAMP4-207ENST00000472442 VPS37CA5D8V6 355 aaPredicted RBP15.58■□□□□ 0.09
SCAMP4-207ENST00000472442 CAMTA2O94983 1202 aa15.58■□□□□ 0.09
SCAMP4-207ENST00000472442 LUZP1Q86V48 1076 aa15.58■□□□□ 0.09
SCAMP4-207ENST00000472442 TM6SF1Q9BZW5 370 aa15.58■□□□□ 0.09
SCAMP4-207ENST00000472442 PAG1Q9NWQ8 432 aa15.58■□□□□ 0.09
SCAMP4-207ENST00000472442 TAF7LQ5H9L4 462 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 SUSD4Q5VX71 490 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 CCDC129Q6ZRS4 1044 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 ZNF771Q7L3S4 317 aaPredicted RBP15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 PTF1AQ7RTS3 328 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 CCDC186Q7Z3E2 898 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 OGFRQ9NZT2 677 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 MYH3P11055 1940 aa15.58■□□□□ 0.08
SCAMP4-207ENST00000472442 CAMK4Q16566 473 aa15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 XAGE2Q96GT9 111 aa15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 PDE8AO60658 829 aa15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 KCNJ4P48050 445 aa15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 IFIT1P09914 478 aaKnown RBP15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 NAA30Q147X3 362 aaPredicted RBP15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 LDHAL6AQ6ZMR3 332 aa15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 MRVI1Q9Y6F6 885 aa15.57■□□□□ 0.08
SCAMP4-207ENST00000472442 ZKSCAN1P17029 563 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 MCMDC2Q4G0Z9 681 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 USPL1Q5W0Q7 1092 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 DRC7Q8IY82 874 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 NRBP1Q9UHY1 535 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 CTNNA3Q9UI47 895 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 AKAP2Q9Y2D5 859 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 ANKRD18BA2A2Z9 1011 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 SMTNL1A8MU46 457 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 TYRO3Q06418 890 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 VPS53Q5VIR6 699 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 SMARCC1Q92922 1105 aaPredicted RBP15.56■□□□□ 0.08
SCAMP4-207ENST00000472442 KCNQ4P56696 695 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 VGLL2Q8N8G2 317 aa15.55■□□□□ 0.08
SCAMP4-207ENST00000472442 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms