RNA–Protein interactions for RNA: ENST00000472397.5

SCAMP3-205, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-205ENST00000472397 CTSWP56202 376 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 GNAI1P63096 354 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 GMLQ99445 158 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 MINPP1Q9UNW1 487 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 JAG2Q9Y219 1238 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 SALL2Q9Y467 1007 aaPredicted RBP13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 SPEF2Q9C093 1822 aa13.02□□□□□ -0.33
SCAMP3-205ENST00000472397 UBE3BQ7Z3V4 1068 aa13.01□□□□□ -0.33
SCAMP3-205ENST00000472397 AGBL3Q8NEM8 1001 aa13.01□□□□□ -0.33
SCAMP3-205ENST00000472397 TTLL11Q8NHH1 800 aa13.01□□□□□ -0.33
SCAMP3-205ENST00000472397 R3HDMLQ9H3Y0 253 aa13.01□□□□□ -0.33
SCAMP3-205ENST00000472397 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
SCAMP3-205ENST00000472397 DDX58O95786 925 aaKnown RBP13□□□□□ -0.33
SCAMP3-205ENST00000472397 CCT4P50991 539 aaKnown RBP13□□□□□ -0.33
SCAMP3-205ENST00000472397 DACT2Q5SW24 774 aa13□□□□□ -0.33
SCAMP3-205ENST00000472397 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
SCAMP3-205ENST00000472397 KIAA0825Q8IV33 1275 aa13□□□□□ -0.33
SCAMP3-205ENST00000472397 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
SCAMP3-205ENST00000472397 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
SCAMP3-205ENST00000472397 HDAC9Q9UKV0 1011 aa13□□□□□ -0.33
SCAMP3-205ENST00000472397 F8W031 263 aaPredicted RBP12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 GTF2IP78347 998 aa12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 KSR2Q6VAB6 950 aa12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 CTU1Q7Z7A3 348 aaKnown RBP12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 ZNF296Q8WUU4 475 aaPredicted RBP12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 CDC5LQ99459 802 aaKnown RBP12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 SAGE1Q9NXZ1 904 aa12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 HPS5Q9UPZ3 1129 aa12.99□□□□□ -0.33
SCAMP3-205ENST00000472397 WNT10BO00744 389 aa12.98□□□□□ -0.33
SCAMP3-205ENST00000472397 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
SCAMP3-205ENST00000472397 PODNQ7Z5L7 613 aa12.98□□□□□ -0.33
SCAMP3-205ENST00000472397 AKAP11Q9UKA4 1901 aa12.98□□□□□ -0.33
SCAMP3-205ENST00000472397 NEURL1BA8MQ27 555 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 PLIN1O60240 522 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 TAF5LO75529 589 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 SLC4A2P04920 1241 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 IGHMBP2P38935 993 aaKnown RBP12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 KCNJ4P48050 445 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 ANGEL1Q9UNK9 670 aaKnown RBP12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 CHMP3Q9Y3E7 222 aa12.97□□□□□ -0.33
SCAMP3-205ENST00000472397 ZNF804BA4D1E1 1349 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 AOX1Q06278 1338 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 ITGA6P23229 1130 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 NEXNQ0ZGT2 675 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 TWISTNBQ3B726 338 aaPredicted RBP12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 OGFOD1Q8N543 542 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 STK31Q9BXU1 1019 aa12.96□□□□□ -0.33
SCAMP3-205ENST00000472397 MED23Q9ULK4 1368 aa12.95□□□□□ -0.34
SCAMP3-205ENST00000472397 PAPPA2Q9BXP8 1791 aa12.95□□□□□ -0.34
SCAMP3-205ENST00000472397 H7C1W4 665 aa12.95□□□□□ -0.34
SCAMP3-205ENST00000472397 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
SCAMP3-205ENST00000472397 CLMNQ96JQ2 1002 aa12.95□□□□□ -0.34
SCAMP3-205ENST00000472397 MPHOSPH8Q99549 860 aa12.95□□□□□ -0.34
SCAMP3-205ENST00000472397 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 F6X3S4 739 aa12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 GPR25O00155 361 aa12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 NF2P35240 595 aa12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 CHRNDQ07001 517 aa12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 ZNF594Q96JF6 807 aaPredicted RBP12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 COA1Q9GZY4 146 aa12.94□□□□□ -0.34
SCAMP3-205ENST00000472397 TNRC18O15417 2968 aaPredicted RBP12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 NPM3O75607 178 aaKnown RBP12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 FKBP1BP68106 108 aa12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 GCKRQ14397 625 aa12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 STRIP1Q5VSL9 837 aa12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 CERS5Q8N5B7 392 aa12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 VEZTQ9HBM0 779 aa12.93□□□□□ -0.34
SCAMP3-205ENST00000472397 PSME4Q14997 1843 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 CASP7P55210 303 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 FLIIQ13045 1269 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 DLGAP5Q15398 846 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 ARMC9Q7Z3E5 817 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 CD209Q9NNX6 404 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 LEMD3Q9Y2U8 911 aa12.92□□□□□ -0.34
SCAMP3-205ENST00000472397 FKTNO75072 461 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 TM4SF4P48230 202 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 RBM5P52756 815 aaKnown RBP eCLIP12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 CFAP100Q494V2 611 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 EPHA10Q5JZY3 1008 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 SPRYD7Q5W111 196 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 WWC1Q8IX03 1113 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 ANKRD2Q9GZV1 360 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 DEFB129Q9H1M3 183 aa12.91□□□□□ -0.34
SCAMP3-205ENST00000472397 ZNF646O15015 1829 aaPredicted RBP12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 ZNF609O15014 1411 aa12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 ANKRD18BA2A2Z9 1011 aa12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 NBPF12Q5TAG4 269 aaPredicted RBP12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 CDAN1Q8IWY9 1227 aa12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 DNAAF4Q8WXU2 420 aa12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 SLC10A4Q96EP9 437 aa12.9□□□□□ -0.34
SCAMP3-205ENST00000472397 PRMT6Q96LA8 375 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms