RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 SCG3Q8WXD2 468 aaKnown RBP10.66□□□□□ -0.7
SCAF4-205ENST00000472318 ANKIB1Q9P2G1 1089 aa10.66□□□□□ -0.7
SCAF4-205ENST00000472318 AHDC1Q5TGY3 1603 aaPredicted RBP10.66□□□□□ -0.7
SCAF4-205ENST00000472318 TMEM2Q9UHN6 1383 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 DIP2AQ14689 1571 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 ABCC3O15438 1527 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 KRBA1A5PL33 1030 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 SIN3BO75182 1162 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 PROCP04070 461 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 LMOD1P29536 600 aaPredicted RBP10.65□□□□□ -0.7
SCAF4-205ENST00000472318 KCNQ4P56696 695 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
SCAF4-205ENST00000472318 ALDH16A1Q8IZ83 802 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 ZNF280CQ8ND82 737 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 SUSD3Q96L08 255 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 SPOCK3Q9BQ16 436 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 SUV39H2Q9H5I1 410 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 BRD7Q9NPI1 651 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 NKTRP30414 1462 aaKnown RBP10.65□□□□□ -0.7
SCAF4-205ENST00000472318 CCDC18Q5T9S5 1454 aa10.65□□□□□ -0.7
SCAF4-205ENST00000472318 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
SCAF4-205ENST00000472318 ELOA3DA6NLF2 546 aaPredicted RBP10.64□□□□□ -0.71
SCAF4-205ENST00000472318 MSTNO14793 375 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 SUZ12Q15022 739 aaKnown RBP10.64□□□□□ -0.71
SCAF4-205ENST00000472318 ELOA3BQ3SY89 546 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 CFAP70Q5T0N1 1121 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 ANKMY2Q8IV38 441 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 ELOA3Q8NG57 546 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 NGLY1Q96IV0 654 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 SLC30A3Q99726 388 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 VRTNQ9H8Y1 702 aa10.64□□□□□ -0.71
SCAF4-205ENST00000472318 TET3O43151 1660 aa10.63□□□□□ -0.71
SCAF4-205ENST00000472318 CEP63Q96MT8 703 aa10.63□□□□□ -0.71
SCAF4-205ENST00000472318 CASKIN1Q8WXD9 1431 aa10.63□□□□□ -0.71
SCAF4-205ENST00000472318 NWD1Q149M9 1564 aa10.63□□□□□ -0.71
SCAF4-205ENST00000472318 CCNB3Q8WWL7 1395 aa10.63□□□□□ -0.71
SCAF4-205ENST00000472318 LRP5O75197 1615 aa10.62□□□□□ -0.71
SCAF4-205ENST00000472318 IGFBP4P22692 258 aa10.62□□□□□ -0.71
SCAF4-205ENST00000472318 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
SCAF4-205ENST00000472318 HIF1AQ16665 826 aa10.62□□□□□ -0.71
SCAF4-205ENST00000472318 BRINP3Q76B58 766 aa10.62□□□□□ -0.71
SCAF4-205ENST00000472318 TNFRSF25Q93038 417 aa10.62□□□□□ -0.71
SCAF4-205ENST00000472318 NOP53Q9NZM5 478 aaKnown RBP10.62□□□□□ -0.71
SCAF4-205ENST00000472318 ADARB2-AS1A8MUL3 147 aa10.61□□□□□ -0.71
SCAF4-205ENST00000472318 YY1P25490 414 aa10.61□□□□□ -0.71
SCAF4-205ENST00000472318 DEFB132Q7Z7B7 95 aa10.61□□□□□ -0.71
SCAF4-205ENST00000472318 HINFPQ9BQA5 517 aa10.61□□□□□ -0.71
SCAF4-205ENST00000472318 MAST1Q9Y2H9 1570 aa10.6□□□□□ -0.71
SCAF4-205ENST00000472318 EEA1Q15075 1411 aa10.6□□□□□ -0.71
SCAF4-205ENST00000472318 RTN1Q16799 776 aa10.6□□□□□ -0.71
SCAF4-205ENST00000472318 KDM5AP29375 1690 aaKnown RBP10.6□□□□□ -0.71
SCAF4-205ENST00000472318 SETD5Q9C0A6 1442 aa10.59□□□□□ -0.71
SCAF4-205ENST00000472318 IER5Q5VY09 327 aa10.59□□□□□ -0.71
SCAF4-205ENST00000472318 BTLAQ7Z6A9 289 aa10.59□□□□□ -0.71
SCAF4-205ENST00000472318 KCNH4Q9UQ05 1017 aa10.59□□□□□ -0.71
SCAF4-205ENST00000472318 CAMSAP2Q08AD1 1489 aa10.59□□□□□ -0.71
SCAF4-205ENST00000472318 NEUROD1Q13562 356 aa10.58□□□□□ -0.72
SCAF4-205ENST00000472318 LOC100996750A0A140TA64 210 aa10.57□□□□□ -0.72
SCAF4-205ENST00000472318 LGR5O75473 907 aa10.57□□□□□ -0.72
SCAF4-205ENST00000472318 ALAS2P22557 587 aa10.57□□□□□ -0.72
SCAF4-205ENST00000472318 RAB44Q7Z6P3 723 aaPredicted RBP10.57□□□□□ -0.72
SCAF4-205ENST00000472318 TRIM11Q96F44 468 aa10.57□□□□□ -0.72
SCAF4-205ENST00000472318 KRTAP4-6Q9BYQ5 205 aa10.57□□□□□ -0.72
SCAF4-205ENST00000472318 USP21Q9UK80 565 aa10.57□□□□□ -0.72
SCAF4-205ENST00000472318 TRPC5Q9UL62 973 aaPredicted RBP10.57□□□□□ -0.72
SCAF4-205ENST00000472318 PNPLA6Q8IY17 1366 aa10.56□□□□□ -0.72
SCAF4-205ENST00000472318 TGFBR3LH3BV60 316 aa10.56□□□□□ -0.72
SCAF4-205ENST00000472318 ATF3P18847 181 aa10.56□□□□□ -0.72
SCAF4-205ENST00000472318 WEE1P30291 646 aa10.56□□□□□ -0.72
SCAF4-205ENST00000472318 DDX17Q92841 729 aaKnown RBP10.56□□□□□ -0.72
SCAF4-205ENST00000472318 C19orf44Q9H6X5 657 aa10.56□□□□□ -0.72
SCAF4-205ENST00000472318 CCDC9Q9Y3X0 531 aaKnown RBP10.56□□□□□ -0.72
SCAF4-205ENST00000472318 CCDC141Q6ZP82 1450 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 PIK3C2BO00750 1634 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 IDI1Q13907 227 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 LRRC59Q96AG4 307 aaKnown RBP10.55□□□□□ -0.72
SCAF4-205ENST00000472318 ZMYND15Q9H091 742 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 BCS1LQ9Y276 419 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 ATRNO75882 1429 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 NCOA3Q9Y6Q9 1424 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 BCL9LQ86UU0 1499 aa10.55□□□□□ -0.72
SCAF4-205ENST00000472318 FOXO3O43524 673 aa10.54□□□□□ -0.72
SCAF4-205ENST00000472318 ADH7P40394 386 aa10.54□□□□□ -0.72
SCAF4-205ENST00000472318 BLMP54132 1417 aaPredicted RBP10.54□□□□□ -0.72
SCAF4-205ENST00000472318 DMGDHQ9UI17 866 aaKnown RBP10.54□□□□□ -0.72
SCAF4-205ENST00000472318 NHSL1Q5SYE7 1610 aa10.54□□□□□ -0.72
SCAF4-205ENST00000472318 MROH1Q8NDA8 1641 aa10.54□□□□□ -0.72
SCAF4-205ENST00000472318 EFCAB6Q5THR3 1501 aa10.53□□□□□ -0.72
SCAF4-205ENST00000472318 PRDM6Q9NQX0 595 aa10.53□□□□□ -0.72
SCAF4-205ENST00000472318 STARD13Q9Y3M8 1113 aa10.53□□□□□ -0.72
SCAF4-205ENST00000472318 ASXL1Q8IXJ9 1541 aa10.53□□□□□ -0.72
SCAF4-205ENST00000472318 ARHGAP31Q2M1Z3 1444 aa10.52□□□□□ -0.73
SCAF4-205ENST00000472318 FAM200AQ8TCP9 573 aa10.52□□□□□ -0.73
SCAF4-205ENST00000472318 PLVAPQ9BX97 442 aa10.52□□□□□ -0.73
SCAF4-205ENST00000472318 EFCC1Q9HA90 598 aa10.52□□□□□ -0.73
SCAF4-205ENST00000472318 FYCO1Q9BQS8 1478 aa10.51□□□□□ -0.73
SCAF4-205ENST00000472318 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.51□□□□□ -0.73
SCAF4-205ENST00000472318 M0R082 166 aa10.51□□□□□ -0.73
SCAF4-205ENST00000472318 COL9A3Q14050 684 aaPredicted RBP10.51□□□□□ -0.73
SCAF4-205ENST00000472318 CD163Q86VB7 1156 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms