RNA–Protein interactions for RNA: ENST00000472129.3

CLTC-204, Transcript of clathrin heavy chain, humanhuman

TSL 2

Gene CLTC, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-204ENST00000472129 ZFYVE28Q9HCC9 887 aa8.7□□□□□ -1.02
CLTC-204ENST00000472129 IGHA2P01877 340 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 ELNP15502 786 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 SELPP16109 830 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 KCNA1Q09470 495 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 FAM129BQ96TA1 746 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 SEMA6BQ9H3T3 888 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 SH2B1Q9NRF2 756 aaPredicted RBP8.69□□□□□ -1.02
CLTC-204ENST00000472129 LATS2Q9NRM7 1088 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 DZANK1Q9NVP4 752 aa8.69□□□□□ -1.02
CLTC-204ENST00000472129 GPR182O15218 404 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 APBA3O96018 575 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 CDC25BP30305 580 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 ORC1Q13415 861 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 FBXO11Q86XK2 927 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 TMC1Q8TDI8 760 aa8.68□□□□□ -1.02
CLTC-204ENST00000472129 PEAR1Q5VY43 1037 aaPredicted RBP8.67□□□□□ -1.02
CLTC-204ENST00000472129 TXNDC11Q6PKC3 985 aa8.67□□□□□ -1.02
CLTC-204ENST00000472129 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
CLTC-204ENST00000472129 OSMRQ99650 979 aa8.67□□□□□ -1.02
CLTC-204ENST00000472129 ZKSCAN3Q9BRR0 538 aa8.67□□□□□ -1.02
CLTC-204ENST00000472129 NIF3L1Q9GZT8 377 aa8.67□□□□□ -1.02
CLTC-204ENST00000472129 AMOTL2Q9Y2J4 779 aa8.67□□□□□ -1.02
CLTC-204ENST00000472129 LINC01387J3KSC0 135 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 CDC27P30260 824 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 GATA4P43694 442 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 PDE3BQ13370 1112 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 SETDB1Q15047 1291 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 PPME1Q9Y570 386 aa8.66□□□□□ -1.02
CLTC-204ENST00000472129 PDE2AO00408 941 aaPredicted RBP8.65□□□□□ -1.02
CLTC-204ENST00000472129 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
CLTC-204ENST00000472129 EDN3P14138 238 aa8.65□□□□□ -1.02
CLTC-204ENST00000472129 EPHA1P21709 976 aa8.65□□□□□ -1.02
CLTC-204ENST00000472129 PSMG3-AS1Q96PY0 264 aa8.65□□□□□ -1.02
CLTC-204ENST00000472129 RBCK1Q9BYM8 510 aa8.65□□□□□ -1.02
CLTC-204ENST00000472129 PTPRAP18433 802 aa8.64□□□□□ -1.03
CLTC-204ENST00000472129 TMC7Q7Z402 723 aa8.64□□□□□ -1.03
CLTC-204ENST00000472129 AEBP1Q8IUX7 1158 aa8.64□□□□□ -1.03
CLTC-204ENST00000472129 NXPE3Q969Y0 559 aa8.64□□□□□ -1.03
CLTC-204ENST00000472129 ADAM19Q9H013 955 aa8.64□□□□□ -1.03
CLTC-204ENST00000472129 DCTN4Q9UJW0 460 aa8.64□□□□□ -1.03
CLTC-204ENST00000472129 DLL1O00548 723 aa8.63□□□□□ -1.03
CLTC-204ENST00000472129 ZMYM1Q5SVZ6 1142 aa8.63□□□□□ -1.03
CLTC-204ENST00000472129 CACTIN-AS1Q8N1I8 211 aa8.63□□□□□ -1.03
CLTC-204ENST00000472129 TMEM102Q8N9M5 508 aaPredicted RBP8.63□□□□□ -1.03
CLTC-204ENST00000472129 GALNT11Q8NCW6 608 aa8.63□□□□□ -1.03
CLTC-204ENST00000472129 LENG1Q96BZ8 264 aaPredicted RBP8.63□□□□□ -1.03
CLTC-204ENST00000472129 NACC1Q96RE7 527 aa8.63□□□□□ -1.03
CLTC-204ENST00000472129 USP21Q9UK80 565 aa8.63□□□□□ -1.03
CLTC-204ENST00000472129 C9orf172C9J069 976 aa8.62□□□□□ -1.03
CLTC-204ENST00000472129 MAPK1P28482 360 aa8.62□□□□□ -1.03
CLTC-204ENST00000472129 MBTPS1Q14703 1052 aa8.62□□□□□ -1.03
CLTC-204ENST00000472129 RSPO4Q2I0M5 234 aaPredicted RBP8.62□□□□□ -1.03
CLTC-204ENST00000472129 GALNT12Q8IXK2 581 aa8.62□□□□□ -1.03
CLTC-204ENST00000472129 CARD10Q9BWT7 1032 aa8.62□□□□□ -1.03
CLTC-204ENST00000472129 MUC3BQ9H195 1237 aa8.62□□□□□ -1.03
CLTC-204ENST00000472129 A0A1W2PP55 124 aa8.61□□□□□ -1.03
CLTC-204ENST00000472129 METTL12A8MUP2 240 aa8.61□□□□□ -1.03
CLTC-204ENST00000472129 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.61□□□□□ -1.03
CLTC-204ENST00000472129 EIF1AYO14602 144 aaKnown RBP8.61□□□□□ -1.03
CLTC-204ENST00000472129 TM4SF5O14894 197 aa8.61□□□□□ -1.03
CLTC-204ENST00000472129 CPNE3O75131 537 aaKnown RBP8.61□□□□□ -1.03
CLTC-204ENST00000472129 ADGRE1Q14246 886 aa8.61□□□□□ -1.03
CLTC-204ENST00000472129 IGF2-ASQ6U949 168 aa8.61□□□□□ -1.03
CLTC-204ENST00000472129 KRTAP9-2Q9BYQ4 174 aa8.61□□□□□ -1.03
CLTC-204ENST00000472129 NEFLP07196 543 aa8.6□□□□□ -1.03
CLTC-204ENST00000472129 ASAP3Q8TDY4 903 aa8.6□□□□□ -1.03
CLTC-204ENST00000472129 DMRTB1Q96MA1 342 aa8.6□□□□□ -1.03
CLTC-204ENST00000472129 KCNK4Q9NYG8 393 aa8.6□□□□□ -1.03
CLTC-204ENST00000472129 SOX13Q9UN79 622 aa8.6□□□□□ -1.03
CLTC-204ENST00000472129 FSCN2O14926 492 aa8.59□□□□□ -1.03
CLTC-204ENST00000472129 FOXD4L6Q3SYB3 417 aaPredicted RBP8.59□□□□□ -1.03
CLTC-204ENST00000472129 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
CLTC-204ENST00000472129 HGSNATQ68CP4 663 aa8.59□□□□□ -1.03
CLTC-204ENST00000472129 FOXD4L3Q6VB84 417 aaPredicted RBP8.59□□□□□ -1.03
CLTC-204ENST00000472129 CSRNP1Q96S65 589 aa8.59□□□□□ -1.03
CLTC-204ENST00000472129 BHLHE41Q9C0J9 482 aaPredicted RBP8.59□□□□□ -1.03
CLTC-204ENST00000472129 NPHS2Q9NP85 383 aa8.59□□□□□ -1.03
CLTC-204ENST00000472129 TPSG1Q9NRR2 321 aa8.59□□□□□ -1.03
CLTC-204ENST00000472129 NRG1Q02297 640 aaPredicted RBP8.58□□□□□ -1.04
CLTC-204ENST00000472129 VN1R5Q7Z5H4 357 aa8.58□□□□□ -1.04
CLTC-204ENST00000472129 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
CLTC-204ENST00000472129 BSNDQ8WZ55 320 aa8.58□□□□□ -1.04
CLTC-204ENST00000472129 CCDC74AQ96AQ1 378 aa8.58□□□□□ -1.04
CLTC-204ENST00000472129 ALKBH8Q96BT7 664 aaKnown RBP8.58□□□□□ -1.04
CLTC-204ENST00000472129 KLHDC7BQ96G42 594 aa8.58□□□□□ -1.04
CLTC-204ENST00000472129 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
CLTC-204ENST00000472129 FAM177BA6PVY3 158 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 H3BRJ5 948 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 DDX3YO15523 660 aaKnown RBP8.57□□□□□ -1.04
CLTC-204ENST00000472129 ALX3O95076 343 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 IREB2P48200 963 aaKnown RBP8.57□□□□□ -1.04
CLTC-204ENST00000472129 DSC3Q14574 896 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 WFDC12Q8WWY7 111 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 SLC7A3Q8WY07 619 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 TCF12Q99081 682 aa8.57□□□□□ -1.04
CLTC-204ENST00000472129 KRTAP9-6A0A140TA67 174 aa8.56□□□□□ -1.04
CLTC-204ENST00000472129 WISP1O95388 367 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms