RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 EAF2Q96CJ1 260 aaPredicted RBP18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 KIF1BPQ96EK5 621 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 FPGT-TNNI3KV9GXZ4 949 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 CHD4Q14839 1912 aa18.1■□□□□ 0.49
SMARCD3-207ENST00000472103 GYG1P46976 350 aa18.09■□□□□ 0.49
SMARCD3-207ENST00000472103 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
SMARCD3-207ENST00000472103 C15orf52Q6ZUT6 534 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-207ENST00000472103 SMC5Q8IY18 1101 aa18.09■□□□□ 0.49
SMARCD3-207ENST00000472103 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
SMARCD3-207ENST00000472103 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
SMARCD3-207ENST00000472103 ERC1Q8IUD2 1116 aa18.08■□□□□ 0.48
SMARCD3-207ENST00000472103 LPIN2Q92539 896 aa18.08■□□□□ 0.48
SMARCD3-207ENST00000472103 EYA3Q99504 573 aa18.08■□□□□ 0.48
SMARCD3-207ENST00000472103 CCDC8Q9H0W5 538 aaPredicted RBP18.08■□□□□ 0.48
SMARCD3-207ENST00000472103 DBNDD1Q9H9R9 158 aa18.08■□□□□ 0.48
SMARCD3-207ENST00000472103 GPR108Q9NPR9 543 aa18.08■□□□□ 0.48
SMARCD3-207ENST00000472103 SLC5A1P13866 664 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 LMNB1P20700 586 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 B4GALNT3Q6L9W6 998 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 LARGE2Q8N3Y3 721 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 GCC1Q96CN9 775 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 FAM84BQ96KN1 310 aaPredicted RBP18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 DBNDD2Q9BQY9 259 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 LRRCC1Q9C099 1032 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 ZC3H12CQ9C0D7 883 aaKnown RBP18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 RNF181Q9P0P0 153 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 SCN9AQ15858 1988 aa18.07■□□□□ 0.48
SMARCD3-207ENST00000472103 GOLGB1Q14789 3259 aaKnown RBP18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 YDJCA8MPS7 323 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 IFIT1P09914 478 aaKnown RBP18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 BCAMP50895 628 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 XAGE2Q96GT9 111 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 NEUROD6Q96NK8 337 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 AKAP2Q9Y2D5 859 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 TIAM2Q8IVF5 1701 aa18.06■□□□□ 0.48
SMARCD3-207ENST00000472103 PHKA1P46020 1223 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 ANKRD45Q5TZF3 282 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 ERICH6BQ5W0A0 696 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 FBXO33Q7Z6M2 555 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 AACSQ86V21 672 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 C16orf71Q8IYS4 520 aaPredicted RBP18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 VPS33BQ9H267 617 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 KCNQ5Q9NR82 932 aa18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 DBNLQ9UJU6 430 aaKnown RBP18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 ZNF646O15015 1829 aaPredicted RBP18.05■□□□□ 0.48
SMARCD3-207ENST00000472103 DCAF8L1A6NGE4 600 aa18.04■□□□□ 0.48
SMARCD3-207ENST00000472103 ECE2O60344 883 aa18.04■□□□□ 0.48
SMARCD3-207ENST00000472103 CD209Q9NNX6 404 aa18.04■□□□□ 0.48
SMARCD3-207ENST00000472103 PPP4R2Q9NY27 417 aa18.04■□□□□ 0.48
SMARCD3-207ENST00000472103 HIBADHP31937 336 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-207ENST00000472103 NIM1KQ8IY84 436 aa18.03■□□□□ 0.48
SMARCD3-207ENST00000472103 CLASRPQ8N2M8 674 aaKnown RBP18.03■□□□□ 0.48
SMARCD3-207ENST00000472103 OTUD7AQ8TE49 926 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-207ENST00000472103 CCDC136Q96JN2 1154 aa18.03■□□□□ 0.48
SMARCD3-207ENST00000472103 IQSEC3Q9UPP2 1182 aaPredicted RBP18.03■□□□□ 0.48
SMARCD3-207ENST00000472103 COL1A1P02452 1464 aaPredicted RBP18.02■□□□□ 0.48
SMARCD3-207ENST00000472103 CCDC102BQ68D86 513 aa18.02■□□□□ 0.48
SMARCD3-207ENST00000472103 COA1Q9GZY4 146 aa18.02■□□□□ 0.48
SMARCD3-207ENST00000472103 ZNF541Q9H0D2 1346 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 PSME4Q14997 1843 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 FZD9O00144 591 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 IL1R1P14778 569 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 NUCB1Q02818 461 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 ZNF804AQ7Z570 1209 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 TDRD7Q8NHU6 1098 aaKnown RBP18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 LNPKQ9C0E8 428 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 JAG2Q9Y219 1238 aa18.01■□□□□ 0.47
SMARCD3-207ENST00000472103 RAD17O75943 681 aa18■□□□□ 0.47
SMARCD3-207ENST00000472103 CAVIN4Q5BKX8 364 aa18■□□□□ 0.47
SMARCD3-207ENST00000472103 JDP2Q8WYK2 163 aa18■□□□□ 0.47
SMARCD3-207ENST00000472103 ZNRF3Q9ULT6 936 aa18■□□□□ 0.47
SMARCD3-207ENST00000472103 MYH13Q9UKX3 1938 aa18■□□□□ 0.47
SMARCD3-207ENST00000472103 SALL3Q9BXA9 1300 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 G3V3G9 751 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 IFIT2P09913 472 aaKnown RBP17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 PDE4AP27815 886 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 CXCL9Q07325 125 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 SCARF1Q14162 830 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 DCAF8Q5TAQ9 597 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 CHD1LQ86WJ1 897 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 SKAP1Q86WV1 359 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 MXD3Q9BW11 206 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 AKAP11Q9UKA4 1901 aa17.99■□□□□ 0.47
SMARCD3-207ENST00000472103 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
SMARCD3-207ENST00000472103 PI16Q6UXB8 463 aa17.98■□□□□ 0.47
SMARCD3-207ENST00000472103 CENPQQ7L2Z9 268 aaPredicted RBP17.98■□□□□ 0.47
SMARCD3-207ENST00000472103 PODNQ7Z5L7 613 aa17.98■□□□□ 0.47
SMARCD3-207ENST00000472103 VPS37DQ86XT2 251 aa17.98■□□□□ 0.47
SMARCD3-207ENST00000472103 PSMD14O00487 310 aa17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 ARID4AP29374 1257 aaPredicted RBP17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 MCAMP43121 646 aa17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 GTF2IP78347 998 aa17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 RASGRF1Q13972 1273 aa17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 GORABQ5T7V8 394 aa17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 NDUFB9Q9Y6M9 179 aa17.97■□□□□ 0.47
SMARCD3-207ENST00000472103 CHAF1AQ13111 956 aaPredicted RBP17.96■□□□□ 0.47
SMARCD3-207ENST00000472103 TTC39AQ5SRH9 613 aa17.96■□□□□ 0.47
SMARCD3-207ENST00000472103 CIAPIN1Q6FI81 312 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms