RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 PRKG1Q13976 671 aa24.69■■□□□ 1.54
SORT1-203ENST00000471996 OTOP1Q7RTM1 612 aa24.69■■□□□ 1.54
SORT1-203ENST00000471996 MED23Q9ULK4 1368 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 MYO3BQ8WXR4 1341 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 WTIPA6NIX2 430 aaPredicted RBP24.68■■□□□ 1.54
SORT1-203ENST00000471996 MMP14P50281 582 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 INHBEP58166 350 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 GOLGA2Q08379 1002 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 STRIP1Q5VSL9 837 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 CCDC191Q8NCU4 936 aa24.68■■□□□ 1.54
SORT1-203ENST00000471996 HTTP42858 3142 aa24.67■■□□□ 1.54
SORT1-203ENST00000471996 MANSC4A6NHS7 340 aaPredicted RBP24.67■■□□□ 1.54
SORT1-203ENST00000471996 SASH1O94885 1247 aa24.67■■□□□ 1.54
SORT1-203ENST00000471996 DUSP27Q5VZP5 1158 aa24.67■■□□□ 1.54
SORT1-203ENST00000471996 IFNL1Q8IU54 200 aa24.67■■□□□ 1.54
SORT1-203ENST00000471996 APOBEC3FQ8IUX4 373 aaKnown RBP24.67■■□□□ 1.54
SORT1-203ENST00000471996 MYD88Q99836 296 aa24.67■■□□□ 1.54
SORT1-203ENST00000471996 TRIM35Q9UPQ4 493 aa24.67■■□□□ 1.54
SORT1-203ENST00000471996 JARID2Q92833 1246 aaPredicted RBP24.66■■□□□ 1.54
SORT1-203ENST00000471996 ANGEL1Q9UNK9 670 aaKnown RBP24.66■■□□□ 1.54
SORT1-203ENST00000471996 FXR1P51114 621 aaKnown RBP eCLIP24.65■■□□□ 1.54
SORT1-203ENST00000471996 FBXW7Q969H0 707 aa24.65■■□□□ 1.54
SORT1-203ENST00000471996 MINPP1Q9UNW1 487 aa24.65■■□□□ 1.54
SORT1-203ENST00000471996 SLC10A4Q96EP9 437 aa24.64■■□□□ 1.54
SORT1-203ENST00000471996 CDC5LQ99459 802 aaKnown RBP24.64■■□□□ 1.54
SORT1-203ENST00000471996 COA1Q9GZY4 146 aa24.64■■□□□ 1.54
SORT1-203ENST00000471996 PHAXQ9H814 394 aaKnown RBP24.64■■□□□ 1.54
SORT1-203ENST00000471996 CWC25Q9NXE8 425 aaPredicted RBP24.64■■□□□ 1.54
SORT1-203ENST00000471996 BSDC1Q9NW68 430 aaPredicted RBP24.63■■□□□ 1.53
SORT1-203ENST00000471996 PTPN22Q9Y2R2 807 aa24.63■■□□□ 1.53
SORT1-203ENST00000471996 ZBTB48P10074 688 aaPredicted RBP24.62■■□□□ 1.53
SORT1-203ENST00000471996 CCT4P50991 539 aaKnown RBP24.62■■□□□ 1.53
SORT1-203ENST00000471996 MAP3K11Q16584 847 aa24.62■■□□□ 1.53
SORT1-203ENST00000471996 CCDC146Q8IYE0 955 aa24.62■■□□□ 1.53
SORT1-203ENST00000471996 ERO1AQ96HE7 468 aa24.62■■□□□ 1.53
SORT1-203ENST00000471996 ZBED3Q96IU2 234 aaPredicted RBP24.62■■□□□ 1.53
SORT1-203ENST00000471996 FZD1Q9UP38 647 aa24.62■■□□□ 1.53
SORT1-203ENST00000471996 IGF2BP3O00425 579 aaKnown RBP eCLIP24.61■■□□□ 1.53
SORT1-203ENST00000471996 ARMC5Q96C12 935 aa24.61■■□□□ 1.53
SORT1-203ENST00000471996 EN2P19622 333 aaPredicted RBP24.6■■□□□ 1.53
SORT1-203ENST00000471996 CTSWP56202 376 aa24.6■■□□□ 1.53
SORT1-203ENST00000471996 TTLL5Q6EMB2 1281 aa24.6■■□□□ 1.53
SORT1-203ENST00000471996 KIAA0825Q8IV33 1275 aa24.6■■□□□ 1.53
SORT1-203ENST00000471996 WNK4Q96J92 1243 aa24.6■■□□□ 1.53
SORT1-203ENST00000471996 CENPFP49454 3210 aa24.6■■□□□ 1.53
SORT1-203ENST00000471996 BRCA2P51587 3418 aa24.6■■□□□ 1.53
SORT1-203ENST00000471996 TXNRD3Q86VQ6 643 aa24.59■■□□□ 1.53
SORT1-203ENST00000471996 CD99L2Q8TCZ2 262 aa24.59■■□□□ 1.53
SORT1-203ENST00000471996 METTL22Q9BUU2 404 aaPredicted RBP24.59■■□□□ 1.53
SORT1-203ENST00000471996 DEFB129Q9H1M3 183 aa24.59■■□□□ 1.53
SORT1-203ENST00000471996 COL1A1P02452 1464 aaPredicted RBP24.58■■□□□ 1.53
SORT1-203ENST00000471996 TTLL11Q8NHH1 800 aa24.58■■□□□ 1.53
SORT1-203ENST00000471996 CLMNQ96JQ2 1002 aa24.58■■□□□ 1.53
SORT1-203ENST00000471996 MBIPQ9NS73 344 aa24.58■■□□□ 1.53
SORT1-203ENST00000471996 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.58■■□□□ 1.53
SORT1-203ENST00000471996 LEMD3Q9Y2U8 911 aa24.58■■□□□ 1.53
SORT1-203ENST00000471996 RUNDC1Q96C34 613 aa24.57■■□□□ 1.52
SORT1-203ENST00000471996 GREM2Q9H772 168 aa24.57■■□□□ 1.52
SORT1-203ENST00000471996 EFCC1Q9HA90 598 aa24.57■■□□□ 1.52
SORT1-203ENST00000471996 ZNF646O15015 1829 aaPredicted RBP24.56■■□□□ 1.52
SORT1-203ENST00000471996 UNCXA6NJT0 531 aa24.56■■□□□ 1.52
SORT1-203ENST00000471996 PPP1R12BO60237 982 aaPredicted RBP24.56■■□□□ 1.52
SORT1-203ENST00000471996 CRHR2Q13324 411 aa24.56■■□□□ 1.52
SORT1-203ENST00000471996 OTUD7BQ6GQQ9 843 aa24.55■■□□□ 1.52
SORT1-203ENST00000471996 RBBP6Q7Z6E9 1792 aaKnown RBP24.54■■□□□ 1.52
SORT1-203ENST00000471996 GTF2IP78347 998 aa24.54■■□□□ 1.52
SORT1-203ENST00000471996 RALBP1Q15311 655 aa24.54■■□□□ 1.52
SORT1-203ENST00000471996 DLGAP5Q15398 846 aa24.54■■□□□ 1.52
SORT1-203ENST00000471996 COLQQ9Y215 455 aaPredicted RBP24.54■■□□□ 1.52
SORT1-203ENST00000471996 PPP2R3BQ9Y5P8 575 aa24.54■■□□□ 1.52
SORT1-203ENST00000471996 SSC5DA1L4H1 1573 aa24.54■■□□□ 1.52
SORT1-203ENST00000471996 DDX58O95786 925 aaKnown RBP24.53■■□□□ 1.52
SORT1-203ENST00000471996 SP3Q02447 781 aa24.53■■□□□ 1.52
SORT1-203ENST00000471996 TMEM106CQ9BVX2 250 aa24.53■■□□□ 1.52
SORT1-203ENST00000471996 ZNF804BA4D1E1 1349 aa24.53■■□□□ 1.52
SORT1-203ENST00000471996 ZNF853P0CG23 659 aa24.52■■□□□ 1.52
SORT1-203ENST00000471996 KLRK1P26718 216 aa24.52■■□□□ 1.52
SORT1-203ENST00000471996 CAP1Q01518 475 aa24.52■■□□□ 1.52
SORT1-203ENST00000471996 SUPT20HL1Q3ZLR7 823 aa24.52■■□□□ 1.52
SORT1-203ENST00000471996 MTMR14Q8NCE2 650 aa24.52■■□□□ 1.52
SORT1-203ENST00000471996 ZNF333Q96JL9 665 aa24.52■■□□□ 1.52
SORT1-203ENST00000471996 KIAA0100Q14667 2235 aaKnown RBP24.51■■□□□ 1.51
SORT1-203ENST00000471996 ELL2O00472 640 aaPredicted RBP24.51■■□□□ 1.51
SORT1-203ENST00000471996 GJA5P36382 358 aa24.51■■□□□ 1.51
SORT1-203ENST00000471996 PTPN18Q99952 460 aa24.51■■□□□ 1.51
SORT1-203ENST00000471996 MAP3K2Q9Y2U5 619 aa24.51■■□□□ 1.51
SORT1-203ENST00000471996 TESPA1A2RU30 521 aaPredicted RBP24.5■■□□□ 1.51
SORT1-203ENST00000471996 IGKV5-2P06315 115 aa24.5■■□□□ 1.51
SORT1-203ENST00000471996 IGHMBP2P38935 993 aaKnown RBP24.5■■□□□ 1.51
SORT1-203ENST00000471996 ANKRD2Q9GZV1 360 aa24.5■■□□□ 1.51
SORT1-203ENST00000471996 IREB2P48200 963 aaKnown RBP24.48■■□□□ 1.51
SORT1-203ENST00000471996 NBPF12Q5TAG4 269 aaPredicted RBP24.48■■□□□ 1.51
SORT1-203ENST00000471996 CERS5Q8N5B7 392 aa24.48■■□□□ 1.51
SORT1-203ENST00000471996 CD209Q9NNX6 404 aa24.48■■□□□ 1.51
SORT1-203ENST00000471996 PCDHAC2Q9Y5I4 1007 aa24.48■■□□□ 1.51
SORT1-203ENST00000471996 MYO1BO43795 1136 aa24.47■■□□□ 1.51
SORT1-203ENST00000471996 USP2O75604 605 aaPredicted RBP24.47■■□□□ 1.51
SORT1-203ENST00000471996 KSR2Q6VAB6 950 aa24.47■■□□□ 1.51
SORT1-203ENST00000471996 NBPF11Q86T75 865 aa24.47■■□□□ 1.51
SORT1-203ENST00000471996 ANKRD13AQ8IZ07 590 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms