RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 GMLQ99445 158 aa28.66■■■□□ 2.18
C9orf3-213ENST00000471978 PSME4Q14997 1843 aa28.66■■■□□ 2.18
C9orf3-213ENST00000471978 USP17L8P0C7I0 530 aa28.65■■■□□ 2.18
C9orf3-213ENST00000471978 HSPA8P11142 646 aaKnown RBP28.65■■■□□ 2.18
C9orf3-213ENST00000471978 MAP2K2P36507 400 aa28.65■■■□□ 2.18
C9orf3-213ENST00000471978 BEGAINQ9BUH8 593 aa28.65■■■□□ 2.18
C9orf3-213ENST00000471978 GGA3Q9NZ52 723 aa28.65■■■□□ 2.18
C9orf3-213ENST00000471978 ANKRD18BA2A2Z9 1011 aa28.64■■■□□ 2.18
C9orf3-213ENST00000471978 COA1Q9GZY4 146 aa28.64■■■□□ 2.18
C9orf3-213ENST00000471978 ZNF804BA4D1E1 1349 aa28.64■■■□□ 2.17
C9orf3-213ENST00000471978 ASTN2O75129 1339 aaPredicted RBP28.64■■■□□ 2.17
C9orf3-213ENST00000471978 POLR2AP24928 1970 aaKnown RBP28.63■■■□□ 2.17
C9orf3-213ENST00000471978 FOXO4P98177 505 aa28.63■■■□□ 2.17
C9orf3-213ENST00000471978 SCARF1Q14162 830 aa28.63■■■□□ 2.17
C9orf3-213ENST00000471978 TXNRD3Q86VQ6 643 aa28.63■■■□□ 2.17
C9orf3-213ENST00000471978 SULF1Q8IWU6 871 aa28.63■■■□□ 2.17
C9orf3-213ENST00000471978 ZNF521Q96K83 1311 aa28.63■■■□□ 2.17
C9orf3-213ENST00000471978 HUNKP57058 714 aa28.62■■■□□ 2.17
C9orf3-213ENST00000471978 FBXW7Q969H0 707 aa28.62■■■□□ 2.17
C9orf3-213ENST00000471978 MYOZ2Q9NPC6 264 aa28.62■■■□□ 2.17
C9orf3-213ENST00000471978 CHMP3Q9Y3E7 222 aa28.62■■■□□ 2.17
C9orf3-213ENST00000471978 KCNJ4P48050 445 aa28.61■■■□□ 2.17
C9orf3-213ENST00000471978 CHRNDQ07001 517 aa28.61■■■□□ 2.17
C9orf3-213ENST00000471978 IFIT5Q13325 482 aaKnown RBP28.61■■■□□ 2.17
C9orf3-213ENST00000471978 GBA2Q9HCG7 927 aaPredicted RBP28.61■■■□□ 2.17
C9orf3-213ENST00000471978 KLRK1P26718 216 aa28.6■■■□□ 2.17
C9orf3-213ENST00000471978 DACT2Q5SW24 774 aa28.6■■■□□ 2.17
C9orf3-213ENST00000471978 ANGEL2Q5VTE6 544 aaKnown RBP28.6■■■□□ 2.17
C9orf3-213ENST00000471978 C2orf69Q8N8R5 385 aa28.6■■■□□ 2.17
C9orf3-213ENST00000471978 MXD3Q9BW11 206 aa28.6■■■□□ 2.17
C9orf3-213ENST00000471978 GRM8O00222 908 aa28.59■■■□□ 2.17
C9orf3-213ENST00000471978 STRIP1Q5VSL9 837 aa28.59■■■□□ 2.17
C9orf3-213ENST00000471978 SLC4A10Q6U841 1118 aa28.59■■■□□ 2.17
C9orf3-213ENST00000471978 LMBR1LQ6UX01 489 aa28.58■■■□□ 2.17
C9orf3-213ENST00000471978 C9orf78Q9NZ63 289 aaPredicted RBP28.58■■■□□ 2.17
C9orf3-213ENST00000471978 ALDH1L1O75891 902 aa28.57■■■□□ 2.16
C9orf3-213ENST00000471978 EPHA10Q5JZY3 1008 aa28.57■■■□□ 2.16
C9orf3-213ENST00000471978 MYO3BQ8WXR4 1341 aa28.57■■■□□ 2.16
C9orf3-213ENST00000471978 OGFOD1Q8N543 542 aa28.56■■■□□ 2.16
C9orf3-213ENST00000471978 CDCA5Q96FF9 252 aa28.56■■■□□ 2.16
C9orf3-213ENST00000471978 SRCIN1Q9C0H9 1055 aa28.56■■■□□ 2.16
C9orf3-213ENST00000471978 TAF5LO75529 589 aa28.55■■■□□ 2.16
C9orf3-213ENST00000471978 BRPF1P55201 1214 aaPredicted RBP28.55■■■□□ 2.16
C9orf3-213ENST00000471978 NOGQ13253 232 aa28.55■■■□□ 2.16
C9orf3-213ENST00000471978 CCDC57Q2TAC2 916 aa28.55■■■□□ 2.16
C9orf3-213ENST00000471978 TTLL5Q6EMB2 1281 aa28.55■■■□□ 2.16
C9orf3-213ENST00000471978 RGMBQ6NW40 437 aa28.55■■■□□ 2.16
C9orf3-213ENST00000471978 HELBQ8NG08 1087 aaPredicted RBP28.55■■■□□ 2.16
C9orf3-213ENST00000471978 PITPNM2Q9BZ72 1349 aa28.54■■■□□ 2.16
C9orf3-213ENST00000471978 SNAP23O00161 211 aa28.54■■■□□ 2.16
C9orf3-213ENST00000471978 ZNF646O15015 1829 aaPredicted RBP28.53■■■□□ 2.16
C9orf3-213ENST00000471978 NBPF9Q3BBW0 867 aa28.53■■■□□ 2.16
C9orf3-213ENST00000471978 TAF7LQ5H9L4 462 aa28.53■■■□□ 2.16
C9orf3-213ENST00000471978 TSKSQ9UJT2 592 aa28.53■■■□□ 2.16
C9orf3-213ENST00000471978 E9PSI1 815 aa28.52■■■□□ 2.16
C9orf3-213ENST00000471978 GTF2IP78347 998 aa28.52■■■□□ 2.16
C9orf3-213ENST00000471978 ZNF594Q96JF6 807 aaPredicted RBP28.52■■■□□ 2.16
C9orf3-213ENST00000471978 ZIC5Q96T25 663 aa28.52■■■□□ 2.16
C9orf3-213ENST00000471978 CD209Q9NNX6 404 aa28.52■■■□□ 2.16
C9orf3-213ENST00000471978 CA12O43570 354 aa28.51■■■□□ 2.15
C9orf3-213ENST00000471978 LDHAL6AQ6ZMR3 332 aa28.51■■■□□ 2.15
C9orf3-213ENST00000471978 MRPL50Q8N5N7 158 aaKnown RBP28.51■■■□□ 2.15
C9orf3-213ENST00000471978 IRS2Q9Y4H2 1338 aa28.5■■■□□ 2.15
C9orf3-213ENST00000471978 MMP14P50281 582 aa28.5■■■□□ 2.15
C9orf3-213ENST00000471978 ZNF157P51786 506 aaPredicted RBP28.5■■■□□ 2.15
C9orf3-213ENST00000471978 C15orf52Q6ZUT6 534 aaKnown RBP28.5■■■□□ 2.15
C9orf3-213ENST00000471978 CCDC102AQ96A19 550 aa28.5■■■□□ 2.15
C9orf3-213ENST00000471978 CNNM1Q9NRU3 951 aa28.5■■■□□ 2.15
C9orf3-213ENST00000471978 SCAF8Q9UPN6 1271 aaKnown RBP28.5■■■□□ 2.15
C9orf3-213ENST00000471978 FAM155AB1AL88 458 aaPredicted RBP28.49■■■□□ 2.15
C9orf3-213ENST00000471978 KIAA0825Q8IV33 1275 aa28.49■■■□□ 2.15
C9orf3-213ENST00000471978 WNT10BO00744 389 aa28.48■■■□□ 2.15
C9orf3-213ENST00000471978 PLIN1O60240 522 aa28.48■■■□□ 2.15
C9orf3-213ENST00000471978 SUCLG2Q96I99 432 aa28.48■■■□□ 2.15
C9orf3-213ENST00000471978 HDAC9Q9UKV0 1011 aa28.48■■■□□ 2.15
C9orf3-213ENST00000471978 A0A1B0GUL6 1792 aa28.47■■■□□ 2.15
C9orf3-213ENST00000471978 NBPF7P0C2Y1 421 aaPredicted RBP28.47■■■□□ 2.15
C9orf3-213ENST00000471978 ZNF804AQ7Z570 1209 aa28.47■■■□□ 2.15
C9orf3-213ENST00000471978 SASH1O94885 1247 aa28.46■■■□□ 2.15
C9orf3-213ENST00000471978 SLFN5Q08AF3 891 aa28.46■■■□□ 2.15
C9orf3-213ENST00000471978 KAZALD1Q96I82 304 aa28.46■■■□□ 2.15
C9orf3-213ENST00000471978 UTYO14607 1347 aa28.45■■■□□ 2.15
C9orf3-213ENST00000471978 PTPRCP08575 1304 aa28.45■■■□□ 2.15
C9orf3-213ENST00000471978 FKBP1BP68106 108 aa28.45■■■□□ 2.14
C9orf3-213ENST00000471978 PRAMEF18Q5VWM3 479 aa28.45■■■□□ 2.14
C9orf3-213ENST00000471978 SSH1Q8WYL5 1049 aa28.45■■■□□ 2.14
C9orf3-213ENST00000471978 IL1R1P14778 569 aa28.44■■■□□ 2.14
C9orf3-213ENST00000471978 KIF23Q02241 960 aaPredicted RBP28.44■■■□□ 2.14
C9orf3-213ENST00000471978 SLC10A3P09131 477 aa28.43■■■□□ 2.14
C9orf3-213ENST00000471978 CERS5Q8N5B7 392 aa28.42■■■□□ 2.14
C9orf3-213ENST00000471978 PAPPA2Q9BXP8 1791 aa28.42■■■□□ 2.14
C9orf3-213ENST00000471978 CDCA7LQ96GN5 454 aa28.41■■■□□ 2.14
C9orf3-213ENST00000471978 ZBED3Q96IU2 234 aaPredicted RBP28.41■■■□□ 2.14
C9orf3-213ENST00000471978 PUS3Q9BZE2 481 aaKnown RBP28.41■■■□□ 2.14
C9orf3-213ENST00000471978 BICC1Q9H694 974 aaKnown RBP28.41■■■□□ 2.14
C9orf3-213ENST00000471978 MOB2Q70IA6 237 aa28.4■■■□□ 2.14
C9orf3-213ENST00000471978 UBE4AQ14139 1066 aa28.39■■■□□ 2.14
C9orf3-213ENST00000471978 DLGAP5Q15398 846 aa28.39■■■□□ 2.14
C9orf3-213ENST00000471978 RASAL3Q86YV0 1011 aa28.39■■■□□ 2.14
C9orf3-213ENST00000471978 APOBEC3FQ8IUX4 373 aaKnown RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms