RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 R3HDMLQ9H3Y0 253 aa25.63■■□□□ 1.69
CCDC78-208ENST00000471861 CTSWP56202 376 aa25.61■■□□□ 1.69
CCDC78-208ENST00000471861 METTL22Q9BUU2 404 aaPredicted RBP25.61■■□□□ 1.69
CCDC78-208ENST00000471861 ADAMTS8Q9UP79 889 aa25.61■■□□□ 1.69
CCDC78-208ENST00000471861 ELL2O00472 640 aaPredicted RBP25.6■■□□□ 1.69
CCDC78-208ENST00000471861 SASH1O94885 1247 aa25.6■■□□□ 1.69
CCDC78-208ENST00000471861 TTLL12Q14166 644 aaPredicted RBP25.6■■□□□ 1.69
CCDC78-208ENST00000471861 FBXO46Q6PJ61 603 aaPredicted RBP25.6■■□□□ 1.69
CCDC78-208ENST00000471861 CFHR5Q9BXR6 569 aa25.6■■□□□ 1.69
CCDC78-208ENST00000471861 MINPP1Q9UNW1 487 aa25.6■■□□□ 1.69
CCDC78-208ENST00000471861 MKI67P46013 3256 aaKnown RBP25.59■■□□□ 1.69
CCDC78-208ENST00000471861 PTPN12Q05209 780 aaKnown RBP25.59■■□□□ 1.69
CCDC78-208ENST00000471861 TXNRD3Q86VQ6 643 aa25.59■■□□□ 1.69
CCDC78-208ENST00000471861 WDR43Q15061 677 aaKnown RBP eCLIP25.58■■□□□ 1.69
CCDC78-208ENST00000471861 TTLL11Q8NHH1 800 aa25.58■■□□□ 1.69
CCDC78-208ENST00000471861 CDC5LQ99459 802 aaKnown RBP25.58■■□□□ 1.69
CCDC78-208ENST00000471861 GREM2Q9H772 168 aa25.58■■□□□ 1.69
CCDC78-208ENST00000471861 IGKV5-2P06315 115 aa25.57■■□□□ 1.68
CCDC78-208ENST00000471861 STRIP1Q5VSL9 837 aa25.57■■□□□ 1.68
CCDC78-208ENST00000471861 BSDC1Q9NW68 430 aaPredicted RBP25.57■■□□□ 1.68
CCDC78-208ENST00000471861 MYH3P11055 1940 aa25.57■■□□□ 1.68
CCDC78-208ENST00000471861 CCT4P50991 539 aaKnown RBP25.56■■□□□ 1.68
CCDC78-208ENST00000471861 SREBF2Q12772 1141 aa25.56■■□□□ 1.68
CCDC78-208ENST00000471861 C8orf58Q8NAV2 365 aa25.56■■□□□ 1.68
CCDC78-208ENST00000471861 FBXW7Q969H0 707 aa25.56■■□□□ 1.68
CCDC78-208ENST00000471861 IFT57Q9NWB7 429 aa25.56■■□□□ 1.68
CCDC78-208ENST00000471861 FZD1Q9UP38 647 aa25.56■■□□□ 1.68
CCDC78-208ENST00000471861 MYO3BQ8WXR4 1341 aa25.56■■□□□ 1.68
CCDC78-208ENST00000471861 FKTNO75072 461 aa25.55■■□□□ 1.68
CCDC78-208ENST00000471861 KLRK1P26718 216 aa25.55■■□□□ 1.68
CCDC78-208ENST00000471861 NF2P35240 595 aa25.55■■□□□ 1.68
CCDC78-208ENST00000471861 PRKG1Q13976 671 aa25.55■■□□□ 1.68
CCDC78-208ENST00000471861 OGFOD1Q8N543 542 aa25.55■■□□□ 1.68
CCDC78-208ENST00000471861 ZBED3Q96IU2 234 aaPredicted RBP25.55■■□□□ 1.68
CCDC78-208ENST00000471861 MAP3K2Q9Y2U5 619 aa25.55■■□□□ 1.68
CCDC78-208ENST00000471861 SSC5DA1L4H1 1573 aa25.54■■□□□ 1.68
CCDC78-208ENST00000471861 LDLRAD1Q5T700 205 aa25.54■■□□□ 1.68
CCDC78-208ENST00000471861 SPRYD7Q5W111 196 aa25.54■■□□□ 1.68
CCDC78-208ENST00000471861 COA1Q9GZY4 146 aa25.54■■□□□ 1.68
CCDC78-208ENST00000471861 CENPFP49454 3210 aa25.52■■□□□ 1.68
CCDC78-208ENST00000471861 BRCA2P51587 3418 aa25.51■■□□□ 1.68
CCDC78-208ENST00000471861 LAMB1P07942 1786 aa25.51■■□□□ 1.67
CCDC78-208ENST00000471861 DDX58O95786 925 aaKnown RBP25.51■■□□□ 1.67
CCDC78-208ENST00000471861 GNAI1P63096 354 aa25.51■■□□□ 1.67
CCDC78-208ENST00000471861 ARMC9Q7Z3E5 817 aa25.51■■□□□ 1.67
CCDC78-208ENST00000471861 APOBEC3FQ8IUX4 373 aaKnown RBP25.51■■□□□ 1.67
CCDC78-208ENST00000471861 KIAA0825Q8IV33 1275 aa25.51■■□□□ 1.67
CCDC78-208ENST00000471861 PI4KAP2A4QPH2 592 aa25.5■■□□□ 1.67
CCDC78-208ENST00000471861 COL1A1P02452 1464 aaPredicted RBP25.5■■□□□ 1.67
CCDC78-208ENST00000471861 CWF19L2Q2TBE0 894 aaKnown RBP25.5■■□□□ 1.67
CCDC78-208ENST00000471861 TSPYL6Q8N831 410 aa25.5■■□□□ 1.67
CCDC78-208ENST00000471861 PI4KAP1Q8N8J0 262 aa25.5■■□□□ 1.67
CCDC78-208ENST00000471861 ANGEL1Q9UNK9 670 aaKnown RBP25.5■■□□□ 1.67
CCDC78-208ENST00000471861 TTLL5Q6EMB2 1281 aa25.49■■□□□ 1.67
CCDC78-208ENST00000471861 KSR2Q6VAB6 950 aa25.49■■□□□ 1.67
CCDC78-208ENST00000471861 LEMD3Q9Y2U8 911 aa25.49■■□□□ 1.67
CCDC78-208ENST00000471861 ZNF804BA4D1E1 1349 aa25.48■■□□□ 1.67
CCDC78-208ENST00000471861 APAF1O14727 1248 aa25.48■■□□□ 1.67
CCDC78-208ENST00000471861 CCDC30Q5VVM6 783 aa25.48■■□□□ 1.67
CCDC78-208ENST00000471861 POTEFA5A3E0 1075 aa25.47■■□□□ 1.67
CCDC78-208ENST00000471861 NEURL1BA8MQ27 555 aa25.47■■□□□ 1.67
CCDC78-208ENST00000471861 OTOP1Q7RTM1 612 aa25.47■■□□□ 1.67
CCDC78-208ENST00000471861 IFNL1Q8IU54 200 aa25.47■■□□□ 1.67
CCDC78-208ENST00000471861 IGF2BP3O00425 579 aaKnown RBP eCLIP25.46■■□□□ 1.67
CCDC78-208ENST00000471861 MMP14P50281 582 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 GTF2IP78347 998 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 MAP3K11Q16584 847 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 UBE3BQ7Z3V4 1068 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 CLMNQ96JQ2 1002 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 TRIM17Q9Y577 477 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 PCDHAC2Q9Y5I4 1007 aa25.46■■□□□ 1.67
CCDC78-208ENST00000471861 IRS2Q9Y4H2 1338 aa25.45■■□□□ 1.66
CCDC78-208ENST00000471861 MANSC4A6NHS7 340 aaPredicted RBP25.45■■□□□ 1.66
CCDC78-208ENST00000471861 ALDH1A1P00352 501 aa25.45■■□□□ 1.66
CCDC78-208ENST00000471861 DDX10Q13206 875 aaKnown RBP25.45■■□□□ 1.66
CCDC78-208ENST00000471861 CERS5Q8N5B7 392 aa25.45■■□□□ 1.66
CCDC78-208ENST00000471861 DEFB129Q9H1M3 183 aa25.45■■□□□ 1.66
CCDC78-208ENST00000471861 H7C1W4 665 aa25.44■■□□□ 1.66
CCDC78-208ENST00000471861 IGHMBP2P38935 993 aaKnown RBP25.44■■□□□ 1.66
CCDC78-208ENST00000471861 RBBP6Q7Z6E9 1792 aaKnown RBP25.44■■□□□ 1.66
CCDC78-208ENST00000471861 AOX1Q06278 1338 aa25.43■■□□□ 1.66
CCDC78-208ENST00000471861 ECM29Q5VYK3 1845 aa25.43■■□□□ 1.66
CCDC78-208ENST00000471861 ITGA6P23229 1130 aa25.43■■□□□ 1.66
CCDC78-208ENST00000471861 CALD1Q05682 793 aaKnown RBP25.43■■□□□ 1.66
CCDC78-208ENST00000471861 WNK4Q96J92 1243 aa25.43■■□□□ 1.66
CCDC78-208ENST00000471861 SNAP23O00161 211 aa25.42■■□□□ 1.66
CCDC78-208ENST00000471861 ZBTB48P10074 688 aaPredicted RBP25.42■■□□□ 1.66
CCDC78-208ENST00000471861 CASP7P55210 303 aa25.42■■□□□ 1.66
CCDC78-208ENST00000471861 G2E3Q7L622 706 aa25.42■■□□□ 1.66
CCDC78-208ENST00000471861 GCC1Q96CN9 775 aa25.42■■□□□ 1.66
CCDC78-208ENST00000471861 SLC10A4Q96EP9 437 aa25.42■■□□□ 1.66
CCDC78-208ENST00000471861 PLA2G12BQ9BX93 195 aa25.42■■□□□ 1.66
CCDC78-208ENST00000471861 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.42■■□□□ 1.66
CCDC78-208ENST00000471861 A0A1B0GUL6 1792 aa25.41■■□□□ 1.66
CCDC78-208ENST00000471861 GJA5P36382 358 aa25.41■■□□□ 1.66
CCDC78-208ENST00000471861 CAP1Q01518 475 aa25.41■■□□□ 1.66
CCDC78-208ENST00000471861 NEXNQ0ZGT2 675 aa25.41■■□□□ 1.66
CCDC78-208ENST00000471861 HABP4Q5JVS0 413 aaKnown RBP25.41■■□□□ 1.66
CCDC78-208ENST00000471861 MTMR14Q8NCE2 650 aa25.41■■□□□ 1.66
CCDC78-208ENST00000471861 ANKRD2Q9GZV1 360 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms