RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 ATP5JP18859 108 aa23.21■■□□□ 1.31
SNX4-203ENST00000471751 KCNJ4P48050 445 aa23.21■■□□□ 1.31
SNX4-203ENST00000471751 CAVIN4Q5BKX8 364 aa23.21■■□□□ 1.31
SNX4-203ENST00000471751 DALRD3Q5D0E6 543 aaKnown RBP23.21■■□□□ 1.31
SNX4-203ENST00000471751 SUPT20HQ8NEM7 779 aa23.21■■□□□ 1.31
SNX4-203ENST00000471751 RTFDC1Q9BY42 306 aaPredicted RBP23.21■■□□□ 1.31
SNX4-203ENST00000471751 CCDC8Q9H0W5 538 aaPredicted RBP23.21■■□□□ 1.31
SNX4-203ENST00000471751 NSFL1CQ9UNZ2 370 aaKnown RBP23.21■■□□□ 1.31
SNX4-203ENST00000471751 ARAP2Q8WZ64 1704 aa23.21■■□□□ 1.31
SNX4-203ENST00000471751 UQCRFS1P1P0C7P4 283 aa23.2■■□□□ 1.3
SNX4-203ENST00000471751 HELBQ8NG08 1087 aaPredicted RBP23.2■■□□□ 1.3
SNX4-203ENST00000471751 IGSF3O75054 1194 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 GPSM2P81274 684 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 BMP2KLQ5H9B9 411 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 GORABQ5T7V8 394 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 EYA3Q99504 573 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 DBNDD2Q9BQY9 259 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 LTBP1Q14766 1721 aa23.19■■□□□ 1.3
SNX4-203ENST00000471751 SEMA3EO15041 775 aa23.18■■□□□ 1.3
SNX4-203ENST00000471751 RGS3P49796 1198 aa23.18■■□□□ 1.3
SNX4-203ENST00000471751 CCDC93Q567U6 631 aa23.18■■□□□ 1.3
SNX4-203ENST00000471751 DPP8Q6V1X1 898 aaPredicted RBP23.18■■□□□ 1.3
SNX4-203ENST00000471751 GNL3LQ9NVN8 582 aaKnown RBP23.18■■□□□ 1.3
SNX4-203ENST00000471751 FBXO33Q7Z6M2 555 aa23.17■■□□□ 1.3
SNX4-203ENST00000471751 TBC1D16Q8TBP0 767 aa23.17■■□□□ 1.3
SNX4-203ENST00000471751 PSMD1Q99460 953 aa23.17■■□□□ 1.3
SNX4-203ENST00000471751 CACNA1SQ13698 1873 aa23.16■■□□□ 1.3
SNX4-203ENST00000471751 MED23Q9ULK4 1368 aa23.16■■□□□ 1.3
SNX4-203ENST00000471751 ARID4AP29374 1257 aaPredicted RBP23.16■■□□□ 1.3
SNX4-203ENST00000471751 PI4K2BQ8TCG2 481 aa23.16■■□□□ 1.3
SNX4-203ENST00000471751 IRS2Q9Y4H2 1338 aa23.16■■□□□ 1.3
SNX4-203ENST00000471751 TTC22Q5TAA0 569 aa23.15■■□□□ 1.3
SNX4-203ENST00000471751 CCDC102BQ68D86 513 aa23.15■■□□□ 1.3
SNX4-203ENST00000471751 OTUD7AQ8TE49 926 aaPredicted RBP23.15■■□□□ 1.3
SNX4-203ENST00000471751 SNED1Q8TER0 1413 aa23.15■■□□□ 1.3
SNX4-203ENST00000471751 PDS5AQ29RF7 1337 aaKnown RBP23.15■■□□□ 1.3
SNX4-203ENST00000471751 UFL1O94874 794 aa23.14■■□□□ 1.3
SNX4-203ENST00000471751 TTC39AQ5SRH9 613 aa23.14■■□□□ 1.3
SNX4-203ENST00000471751 FAM84BQ96KN1 310 aaPredicted RBP23.14■■□□□ 1.3
SNX4-203ENST00000471751 POLLQ9UGP5 575 aa23.14■■□□□ 1.3
SNX4-203ENST00000471751 ARFGEF1Q9Y6D6 1849 aa23.14■■□□□ 1.29
SNX4-203ENST00000471751 HIBADHP31937 336 aaKnown RBP23.13■■□□□ 1.29
SNX4-203ENST00000471751 ZNF804AQ7Z570 1209 aa23.13■■□□□ 1.29
SNX4-203ENST00000471751 HAUS7Q99871 368 aa23.13■■□□□ 1.29
SNX4-203ENST00000471751 ZC3H12CQ9C0D7 883 aaKnown RBP23.13■■□□□ 1.29
SNX4-203ENST00000471751 TLR7Q9NYK1 1049 aaKnown RBP23.13■■□□□ 1.29
SNX4-203ENST00000471751 C21orf2O43822 256 aa23.12■■□□□ 1.29
SNX4-203ENST00000471751 GRIN3BO60391 1043 aa23.12■■□□□ 1.29
SNX4-203ENST00000471751 VPS37DQ86XT2 251 aa23.12■■□□□ 1.29
SNX4-203ENST00000471751 ZNF784Q8NCA9 323 aaPredicted RBP23.12■■□□□ 1.29
SNX4-203ENST00000471751 UTRNP46939 3433 aa23.12■■□□□ 1.29
SNX4-203ENST00000471751 C6orf229H3BNL8 230 aa23.11■■□□□ 1.29
SNX4-203ENST00000471751 ADORA1P30542 326 aa23.11■■□□□ 1.29
SNX4-203ENST00000471751 TMED8Q6PL24 325 aaPredicted RBP23.11■■□□□ 1.29
SNX4-203ENST00000471751 COA1Q9GZY4 146 aa23.11■■□□□ 1.29
SNX4-203ENST00000471751 LTBP3Q9NS15 1303 aa23.11■■□□□ 1.29
SNX4-203ENST00000471751 EIF5BO60841 1220 aaKnown RBP23.1■■□□□ 1.29
SNX4-203ENST00000471751 TTF1Q15361 905 aaPredicted RBP23.1■■□□□ 1.29
SNX4-203ENST00000471751 WASHC4Q2M389 1173 aa23.1■■□□□ 1.29
SNX4-203ENST00000471751 CNTROBQ8N137 903 aa23.1■■□□□ 1.29
SNX4-203ENST00000471751 EVI5LQ96CN4 794 aa23.1■■□□□ 1.29
SNX4-203ENST00000471751 DENND2AQ9ULE3 1009 aa23.1■■□□□ 1.29
SNX4-203ENST00000471751 IL1R1P14778 569 aa23.09■■□□□ 1.29
SNX4-203ENST00000471751 FKBP4Q02790 459 aaKnown RBP eCLIP23.09■■□□□ 1.29
SNX4-203ENST00000471751 LRRFIP1Q32MZ4 808 aaKnown RBP23.09■■□□□ 1.29
SNX4-203ENST00000471751 SNAP23O00161 211 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 PHKA1P46020 1223 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 BCAMP50895 628 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 PODNQ7Z5L7 613 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 TDRD7Q8NHU6 1098 aaKnown RBP23.08■■□□□ 1.29
SNX4-203ENST00000471751 AKAP11Q9UKA4 1901 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 DUOX1Q9NRD9 1551 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 FER1L6Q2WGJ9 1857 aa23.08■■□□□ 1.29
SNX4-203ENST00000471751 KIAA2012Q0VF49 1180 aa23.08■■□□□ 1.28
SNX4-203ENST00000471751 BCL11AQ9H165 835 aa23.08■■□□□ 1.28
SNX4-203ENST00000471751 BOLA2Q9H3K6 86 aa23.08■■□□□ 1.28
SNX4-203ENST00000471751 BCS1LQ9Y276 419 aa23.08■■□□□ 1.28
SNX4-203ENST00000471751 GSPT1P15170 499 aaKnown RBP23.07■■□□□ 1.28
SNX4-203ENST00000471751 GYG1P46976 350 aa23.07■■□□□ 1.28
SNX4-203ENST00000471751 RFX7Q2KHR2 1363 aa23.07■■□□□ 1.28
SNX4-203ENST00000471751 CD209Q9NNX6 404 aa23.07■■□□□ 1.28
SNX4-203ENST00000471751 HIP1O00291 1037 aa23.06■■□□□ 1.28
SNX4-203ENST00000471751 SPATA5Q8NB90 893 aa23.06■■□□□ 1.28
SNX4-203ENST00000471751 SDSP20132 328 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 MCAMP43121 646 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 TXNRD3Q86VQ6 643 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 SKAP1Q86WV1 359 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 ZGPATQ8N5A5 531 aaKnown RBP23.05■■□□□ 1.28
SNX4-203ENST00000471751 WDR66Q8TBY9 1149 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 PAG1Q9NWQ8 432 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 HMG20BQ9P0W2 317 aa23.05■■□□□ 1.28
SNX4-203ENST00000471751 SALL1Q9NSC2 1324 aa23.04■■□□□ 1.28
SNX4-203ENST00000471751 WTIPA6NIX2 430 aaPredicted RBP23.04■■□□□ 1.28
SNX4-203ENST00000471751 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
SNX4-203ENST00000471751 OLFM4Q6UX06 510 aa23.04■■□□□ 1.28
SNX4-203ENST00000471751 TAOK3Q9H2K8 898 aa23.04■■□□□ 1.28
SNX4-203ENST00000471751 FAM205AQ6ZU69 1335 aa23.03■■□□□ 1.28
SNX4-203ENST00000471751 TRIM6-TRIM34B2RNG4 842 aa23.03■■□□□ 1.28
SNX4-203ENST00000471751 TSHZ3Q63HK5 1081 aa23.03■■□□□ 1.28
SNX4-203ENST00000471751 KBTBD3Q8NAB2 608 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms