RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 SALL4Q9UJQ4 1053 aa7.06□□□□□ -1.28
PRPF40A-207ENST00000471701 FSCN2O14926 492 aa7.05□□□□□ -1.28
PRPF40A-207ENST00000471701 FAM13AO94988 1023 aa7.05□□□□□ -1.28
PRPF40A-207ENST00000471701 MPSTP25325 297 aa7.05□□□□□ -1.28
PRPF40A-207ENST00000471701 C1orf127Q8N9H9 656 aa7.05□□□□□ -1.28
PRPF40A-207ENST00000471701 GALNT11Q8NCW6 608 aa7.05□□□□□ -1.28
PRPF40A-207ENST00000471701 SH2B1Q9NRF2 756 aaPredicted RBP7.05□□□□□ -1.28
PRPF40A-207ENST00000471701 TMEM88BA6NKF7 163 aa7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 DUOXA2Q1HG44 320 aa7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 C14orf37Q86TY3 774 aa7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 AGGF1Q8N302 714 aaeCLIP7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 CEP41Q9BYV8 373 aa7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 ADAM19Q9H013 955 aa7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 SEC31BQ9NQW1 1179 aa7.04□□□□□ -1.28
PRPF40A-207ENST00000471701 USP5P45974 858 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 ARL4DP49703 201 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 FKBP4Q02790 459 aaKnown RBP eCLIP7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 EHHADHQ08426 723 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 LRP8Q14114 963 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 ACAD11Q709F0 780 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 CARD10Q9BWT7 1032 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 POLIQ9UNA4 740 aa7.03□□□□□ -1.28
PRPF40A-207ENST00000471701 A6NHS1 94 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 PDE2AO00408 941 aaPredicted RBP7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 EPHA1P21709 976 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 SF3B2Q13435 895 aaKnown RBP7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 MTMR3Q13615 1198 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 KLHDC7BQ96G42 594 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 DZANK1Q9NVP4 752 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 STOML1Q9UBI4 398 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 RNF112Q9ULX5 631 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 RAXQ9Y2V3 346 aa7.02□□□□□ -1.29
PRPF40A-207ENST00000471701 H3BRJ5 948 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 DHX15O43143 795 aaKnown RBP7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 HYAL3O43820 417 aaPredicted RBP7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 ABL1P00519 1130 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 FSTP19883 344 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 PIP4K2BP78356 416 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 WNT8BQ93098 351 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 OSGEPQ9NPF4 335 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 KCNK4Q9NYG8 393 aa7.01□□□□□ -1.29
PRPF40A-207ENST00000471701 GSC2O15499 205 aa7□□□□□ -1.29
PRPF40A-207ENST00000471701 SART1O43290 800 aaKnown RBP7□□□□□ -1.29
PRPF40A-207ENST00000471701 PHACTR2O75167 634 aa7□□□□□ -1.29
PRPF40A-207ENST00000471701 NPR3P17342 541 aa7□□□□□ -1.29
PRPF40A-207ENST00000471701 Q6ZS46 218 aa7□□□□□ -1.29
PRPF40A-207ENST00000471701 SLC7A3Q8WY07 619 aa7□□□□□ -1.29
PRPF40A-207ENST00000471701 UBL7Q96S82 380 aaPredicted RBP7□□□□□ -1.29
PRPF40A-207ENST00000471701 OSMRQ99650 979 aa7□□□□□ -1.29
PRPF40A-207ENST00000471701 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7□□□□□ -1.29
PRPF40A-207ENST00000471701 NFKBIEO00221 500 aa6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 DDX3YO15523 660 aaKnown RBP6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 TRPA1O75762 1119 aa6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 WISP1O95388 367 aa6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 EDN3P14138 238 aa6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 ADAMTSL4Q6UY14 1074 aa6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 TMEM102Q8N9M5 508 aaPredicted RBP6.99□□□□□ -1.29
PRPF40A-207ENST00000471701 EREGO14944 169 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 TNFRSF21O75509 655 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 ACPPP15309 386 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 B4GALNT3Q6L9W6 998 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 KIAA1211Q6ZU35 1233 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 SNX29Q8TEQ0 813 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 UTP4Q969X6 686 aaKnown RBP6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 CHRDQ9H2X0 955 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 C1orf115Q9H7X2 142 aa6.98□□□□□ -1.29
PRPF40A-207ENST00000471701 CARNS1A5YM72 827 aa6.97□□□□□ -1.29
PRPF40A-207ENST00000471701 IGLV1-40P01703 118 aa6.97□□□□□ -1.29
PRPF40A-207ENST00000471701 C19orf57Q0VDD7 668 aa6.97□□□□□ -1.29
PRPF40A-207ENST00000471701 BSNDQ8WZ55 320 aa6.97□□□□□ -1.29
PRPF40A-207ENST00000471701 ANO2Q9NQ90 1003 aa6.97□□□□□ -1.29
PRPF40A-207ENST00000471701 NLRP12P59046 1061 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 IKBKEQ14164 716 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 PHLDB3Q6NSJ2 640 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 ASAP3Q8TDY4 903 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 UBASH3BQ8TF42 649 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 FOXD4L4Q8WXT5 416 aaPredicted RBP6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 ZKSCAN3Q9BRR0 538 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 RUSC1Q9BVN2 902 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 RNF208Q9H0X6 261 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 PCMTD2Q9NV79 361 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 AMOTL2Q9Y2J4 779 aa6.96□□□□□ -1.3
PRPF40A-207ENST00000471701 TM4SF5O14894 197 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 FZD6O60353 706 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 ADAM11O75078 769 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 ARMC10Q8N2F6 343 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 FAM46AQ96IP4 442 aaKnown RBP6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 HHIPQ96QV1 700 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 ZFYVE28Q9HCC9 887 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 CCDC87Q9NVE4 849 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 FOXD3Q9UJU5 478 aaPredicted RBP6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 SOX13Q9UN79 622 aa6.95□□□□□ -1.3
PRPF40A-207ENST00000471701 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-207ENST00000471701 EIF4EBP3O60516 100 aaPredicted RBP6.94□□□□□ -1.3
PRPF40A-207ENST00000471701 NEFLP07196 543 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms