RNA–Protein interactions for RNA: ENST00000471697.1

SCN3A-207, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-207ENST00000471697 HOXD8P13378 290 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-207ENST00000471697 EIF2AK2P19525 551 aaKnown RBP4.66□□□□□ -1.66
SCN3A-207ENST00000471697 INPP5BP32019 993 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 MLLT1Q03111 559 aaPredicted RBP4.66□□□□□ -1.66
SCN3A-207ENST00000471697 SF3A1Q15459 793 aaKnown RBP4.66□□□□□ -1.66
SCN3A-207ENST00000471697 NOM1Q5C9Z4 860 aaKnown RBP4.66□□□□□ -1.66
SCN3A-207ENST00000471697 HDGFL1Q5TGJ6 251 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 GIMAP6Q6P9H5 292 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 NFATC2IPQ8NCF5 419 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 IFT43Q96FT9 208 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 RIPOR2Q9Y4F9 1068 aa4.66□□□□□ -1.66
SCN3A-207ENST00000471697 WDR64B1ANS9 1081 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 TM4SF5O14894 197 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 SKIP12755 728 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 FOSL1P15407 271 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 ZNF124Q15973 351 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-207ENST00000471697 DEPDC4Q8N2C3 294 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 GALNT11Q8NCW6 608 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 UCN2Q96RP3 112 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 C2orf49Q9BVC5 232 aaPredicted RBP4.65□□□□□ -1.67
SCN3A-207ENST00000471697 PPP1R12CQ9BZL4 782 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 BCL11AQ9H165 835 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 HIF3AQ9Y2N7 669 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 NCANO14594 1321 aa4.65□□□□□ -1.67
SCN3A-207ENST00000471697 PAPLNO95428 1278 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 RARAP10276 462 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 TARSP26639 723 aaKnown RBP4.64□□□□□ -1.67
SCN3A-207ENST00000471697 CD68P34810 354 aaPredicted RBP4.64□□□□□ -1.67
SCN3A-207ENST00000471697 NAALADL2Q58DX5 795 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 B4GALNT3Q6L9W6 998 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 KIAA1211Q6ZU35 1233 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 BEND4Q6ZU67 534 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 ACAD11Q709F0 780 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 BCL2L13Q9BXK5 485 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 KRTAP9-8Q9BYQ0 159 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 TLR7Q9NYK1 1049 aaKnown RBP4.64□□□□□ -1.67
SCN3A-207ENST00000471697 BCS1LQ9Y276 419 aa4.64□□□□□ -1.67
SCN3A-207ENST00000471697 LOC102724428A0A0B4J2F2 783 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 PRRG2O14669 202 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 C21orf2O43822 256 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 SIK1P57059 783 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 NCOA4Q13772 614 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 RTN1Q16799 776 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 GDF6Q6KF10 455 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-207ENST00000471697 ZNF662Q6ZS27 426 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 HFE2Q6ZVN8 426 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 TP53INP2Q8IXH6 220 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 AGBL5Q8NDL9 886 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 GIMAP7Q8NHV1 300 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 GAS2L2Q8NHY3 880 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 PPP1R1BQ9UD71 204 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-207ENST00000471697 LEMD3Q9Y2U8 911 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 PPME1Q9Y570 386 aa4.63□□□□□ -1.67
SCN3A-207ENST00000471697 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.63□□□□□ -1.67
SCN3A-207ENST00000471697 ZBTB7BO15156 539 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-207ENST00000471697 PPP1R12BO60237 982 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-207ENST00000471697 FARP2O94887 1054 aaPredicted RBP4.62□□□□□ -1.67
SCN3A-207ENST00000471697 BMP3P12645 472 aa4.62□□□□□ -1.67
SCN3A-207ENST00000471697 DPH6Q7L8W6 267 aa4.62□□□□□ -1.67
SCN3A-207ENST00000471697 KRT25Q7Z3Z0 450 aa4.62□□□□□ -1.67
SCN3A-207ENST00000471697 NOP9Q86U38 636 aaKnown RBP4.62□□□□□ -1.67
SCN3A-207ENST00000471697 TRIM50Q86XT4 487 aa4.62□□□□□ -1.67
SCN3A-207ENST00000471697 TPCN2Q8NHX9 752 aa4.62□□□□□ -1.67
SCN3A-207ENST00000471697 PALM3A6NDB9 673 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-207ENST00000471697 USP17L5A8MUK1 530 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 SASH3O75995 380 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 EGFRP00533 1210 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 NEFLP07196 543 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 ZNF865P0CJ78 1059 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-207ENST00000471697 SOX18P35713 384 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 PKN1Q16512 942 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 ANKRD34AQ69YU3 496 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 ZNF526Q8TF50 670 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-207ENST00000471697 GIPC2Q8TF65 315 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 MYH16Q9H6N6 1097 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 ATG3Q9NT62 314 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 BSDC1Q9NW68 430 aaPredicted RBP4.61□□□□□ -1.67
SCN3A-207ENST00000471697 KCNK4Q9NYG8 393 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 KIAA1024Q9UPX6 916 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 SUGT1Q9Y2Z0 365 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 CARMIL2Q6F5E8 1435 aa4.61□□□□□ -1.67
SCN3A-207ENST00000471697 GHRHP01286 108 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 LMOD1P29536 600 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-207ENST00000471697 IDH3AP50213 366 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 ARSDP51689 593 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 ZNF326Q5BKZ1 582 aaKnown RBP4.6□□□□□ -1.67
SCN3A-207ENST00000471697 CCDC102BQ68D86 513 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 LILRA6Q6PI73 481 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 CILP2Q8IUL8 1156 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 EXOC8Q8IYI6 725 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 KLHL23Q8NBE8 558 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 MICAL1Q8TDZ2 1067 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 MFSD14AQ96MC6 490 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 RBSNQ9H1K0 784 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 KCNF1Q9H3M0 494 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 PAK6Q9NQU5 681 aaPredicted RBP4.6□□□□□ -1.67
SCN3A-207ENST00000471697 SLC52A1Q9NWF4 448 aa4.6□□□□□ -1.67
SCN3A-207ENST00000471697 TFIP11Q9UBB9 837 aaKnown RBP4.6□□□□□ -1.67
SCN3A-207ENST00000471697 TRIM33Q9UPN9 1127 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms