RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 LEMD3Q9Y2U8 911 aa23.55■■□□□ 1.36
PSPC1-203ENST00000471658 IFIT1P09914 478 aaKnown RBP23.54■■□□□ 1.36
PSPC1-203ENST00000471658 ATP2B4P23634 1241 aa23.54■■□□□ 1.36
PSPC1-203ENST00000471658 DPP8Q6V1X1 898 aaPredicted RBP23.54■■□□□ 1.36
PSPC1-203ENST00000471658 C6orf229H3BNL8 230 aa23.53■■□□□ 1.36
PSPC1-203ENST00000471658 STAP2Q9UGK3 403 aa23.53■■□□□ 1.36
PSPC1-203ENST00000471658 BRCA1P38398 1863 aaKnown RBP23.53■■□□□ 1.36
PSPC1-203ENST00000471658 IRS2Q9Y4H2 1338 aa23.53■■□□□ 1.36
PSPC1-203ENST00000471658 GYG1P46976 350 aa23.52■■□□□ 1.36
PSPC1-203ENST00000471658 GORABQ5T7V8 394 aa23.52■■□□□ 1.36
PSPC1-203ENST00000471658 SNED1Q8TER0 1413 aa23.52■■□□□ 1.36
PSPC1-203ENST00000471658 PHKA1P46020 1223 aa23.51■■□□□ 1.35
PSPC1-203ENST00000471658 BCAMP50895 628 aa23.51■■□□□ 1.35
PSPC1-203ENST00000471658 ECHDC1Q9NTX5 307 aa23.51■■□□□ 1.35
PSPC1-203ENST00000471658 GOLGB1Q14789 3259 aaKnown RBP23.51■■□□□ 1.35
PSPC1-203ENST00000471658 LTBP1Q14766 1721 aa23.51■■□□□ 1.35
PSPC1-203ENST00000471658 DUOX1Q9NRD9 1551 aa23.51■■□□□ 1.35
PSPC1-203ENST00000471658 FAM84BQ96KN1 310 aaPredicted RBP23.51■■□□□ 1.35
PSPC1-203ENST00000471658 OSBPL3Q9H4L5 887 aa23.51■■□□□ 1.35
PSPC1-203ENST00000471658 CCDC93Q567U6 631 aa23.5■■□□□ 1.35
PSPC1-203ENST00000471658 CCDC102BQ68D86 513 aa23.5■■□□□ 1.35
PSPC1-203ENST00000471658 CC2D2BQ6DHV5 1058 aa23.5■■□□□ 1.35
PSPC1-203ENST00000471658 PI4K2BQ8TCG2 481 aa23.5■■□□□ 1.35
PSPC1-203ENST00000471658 RIMBP2O15034 1052 aa23.49■■□□□ 1.35
PSPC1-203ENST00000471658 BOLA2Q9H3K6 86 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 TTC41PQ6P2S7 1318 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 SCARF1Q14162 830 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 CCDC158Q5M9N0 1113 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 FBXO33Q7Z6M2 555 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 GPATCH3Q96I76 525 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 NDUFB9Q9Y6M9 179 aa23.48■■□□□ 1.35
PSPC1-203ENST00000471658 MAP4K4O95819 1239 aaPredicted RBP23.47■■□□□ 1.35
PSPC1-203ENST00000471658 ATP5JP18859 108 aa23.47■■□□□ 1.35
PSPC1-203ENST00000471658 RTKN2Q8IZC4 609 aa23.47■■□□□ 1.35
PSPC1-203ENST00000471658 RTFDC1Q9BY42 306 aaPredicted RBP23.47■■□□□ 1.35
PSPC1-203ENST00000471658 IQSEC3Q9UPP2 1182 aaPredicted RBP23.47■■□□□ 1.35
PSPC1-203ENST00000471658 ARAP2Q8WZ64 1704 aa23.46■■□□□ 1.35
PSPC1-203ENST00000471658 GSPT1P15170 499 aaKnown RBP23.46■■□□□ 1.35
PSPC1-203ENST00000471658 HIBADHP31937 336 aaKnown RBP23.46■■□□□ 1.35
PSPC1-203ENST00000471658 CAVIN4Q5BKX8 364 aa23.46■■□□□ 1.35
PSPC1-203ENST00000471658 TTC22Q5TAA0 569 aa23.46■■□□□ 1.35
PSPC1-203ENST00000471658 C15orf52Q6ZUT6 534 aaKnown RBP23.46■■□□□ 1.35
PSPC1-203ENST00000471658 WASHC4Q2M389 1173 aa23.45■■□□□ 1.34
PSPC1-203ENST00000471658 SNRKQ9NRH2 765 aa23.45■■□□□ 1.34
PSPC1-203ENST00000471658 SOGA3Q5TF21 947 aa23.44■■□□□ 1.34
PSPC1-203ENST00000471658 PI16Q6UXB8 463 aa23.44■■□□□ 1.34
PSPC1-203ENST00000471658 AOX1Q06278 1338 aa23.44■■□□□ 1.34
PSPC1-203ENST00000471658 MED23Q9ULK4 1368 aa23.44■■□□□ 1.34
PSPC1-203ENST00000471658 ERC2O15083 957 aa23.44■■□□□ 1.34
PSPC1-203ENST00000471658 GLRX3O76003 335 aaKnown RBP23.44■■□□□ 1.34
PSPC1-203ENST00000471658 VPS37DQ86XT2 251 aa23.44■■□□□ 1.34
PSPC1-203ENST00000471658 EDC3Q96F86 508 aaKnown RBP23.44■■□□□ 1.34
PSPC1-203ENST00000471658 ZC3H12CQ9C0D7 883 aaKnown RBP23.44■■□□□ 1.34
PSPC1-203ENST00000471658 NFKBIEO00221 500 aa23.43■■□□□ 1.34
PSPC1-203ENST00000471658 ARID4AP29374 1257 aaPredicted RBP23.43■■□□□ 1.34
PSPC1-203ENST00000471658 MCAMP43121 646 aa23.43■■□□□ 1.34
PSPC1-203ENST00000471658 FKBP4Q02790 459 aaKnown RBP eCLIP23.43■■□□□ 1.34
PSPC1-203ENST00000471658 DOK7Q18PE1 504 aa23.43■■□□□ 1.34
PSPC1-203ENST00000471658 PELP1Q8IZL8 1130 aaKnown RBP23.43■■□□□ 1.34
PSPC1-203ENST00000471658 EYA3Q99504 573 aa23.43■■□□□ 1.34
PSPC1-203ENST00000471658 ZNF277Q9NRM2 450 aaPredicted RBP23.43■■□□□ 1.34
PSPC1-203ENST00000471658 UQCRFS1P1P0C7P4 283 aa23.42■■□□□ 1.34
PSPC1-203ENST00000471658 AOC3Q16853 763 aa23.42■■□□□ 1.34
PSPC1-203ENST00000471658 GRIPAP1Q4V328 841 aa23.42■■□□□ 1.34
PSPC1-203ENST00000471658 PSMD1Q99460 953 aa23.42■■□□□ 1.34
PSPC1-203ENST00000471658 DNAJC2Q99543 621 aaKnown RBP23.42■■□□□ 1.34
PSPC1-203ENST00000471658 YBX3P16989 372 aaKnown RBP eCLIP23.41■■□□□ 1.342e-7■■■■□ 22.9
PSPC1-203ENST00000471658 RASGRF1Q13972 1273 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 SUPT20HQ8NEM7 779 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 ZNF512BQ96KM6 892 aaPredicted RBP23.41■■□□□ 1.34
PSPC1-203ENST00000471658 CD209Q9NNX6 404 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 HMG20BQ9P0W2 317 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 ZAP70P43403 619 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 ZNF804AQ7Z570 1209 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 HAUS7Q99871 368 aa23.41■■□□□ 1.34
PSPC1-203ENST00000471658 SDSP20132 328 aa23.4■■□□□ 1.34
PSPC1-203ENST00000471658 RASSF7Q02833 373 aa23.4■■□□□ 1.34
PSPC1-203ENST00000471658 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.4■■□□□ 1.34
PSPC1-203ENST00000471658 TRIM6-TRIM34B2RNG4 842 aa23.39■■□□□ 1.33
PSPC1-203ENST00000471658 PPIP5K2O43314 1243 aa23.39■■□□□ 1.33
PSPC1-203ENST00000471658 KIAA2012Q0VF49 1180 aa23.39■■□□□ 1.33
PSPC1-203ENST00000471658 TDRD7Q8NHU6 1098 aaKnown RBP23.39■■□□□ 1.33
PSPC1-203ENST00000471658 ANTXR1Q9H6X2 564 aa23.39■■□□□ 1.33
PSPC1-203ENST00000471658 DBNDD1Q9H9R9 158 aa23.39■■□□□ 1.33
PSPC1-203ENST00000471658 GNL3LQ9NVN8 582 aaKnown RBP23.39■■□□□ 1.33
PSPC1-203ENST00000471658 JAG2Q9Y219 1238 aa23.39■■□□□ 1.33
PSPC1-203ENST00000471658 ARFGEF1Q9Y6D6 1849 aa23.38■■□□□ 1.33
PSPC1-203ENST00000471658 BMP2KLQ5H9B9 411 aa23.38■■□□□ 1.33
PSPC1-203ENST00000471658 ARHGAP27Q6ZUM4 889 aa23.38■■□□□ 1.33
PSPC1-203ENST00000471658 SPATA5Q8NB90 893 aa23.38■■□□□ 1.33
PSPC1-203ENST00000471658 RILPL2Q969X0 211 aa23.38■■□□□ 1.33
PSPC1-203ENST00000471658 TAOK3Q9H2K8 898 aa23.38■■□□□ 1.33
PSPC1-203ENST00000471658 COL1A1P02452 1464 aaPredicted RBP23.38■■□□□ 1.33
PSPC1-203ENST00000471658 FER1L6Q2WGJ9 1857 aa23.37■■□□□ 1.33
PSPC1-203ENST00000471658 GOLIM4O00461 696 aa23.37■■□□□ 1.33
PSPC1-203ENST00000471658 FRAT2O75474 233 aaPredicted RBP23.37■■□□□ 1.33
PSPC1-203ENST00000471658 IL1R1P14778 569 aa23.37■■□□□ 1.33
PSPC1-203ENST00000471658 PRELPP51888 382 aa23.37■■□□□ 1.33
PSPC1-203ENST00000471658 COA1Q9GZY4 146 aa23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms