RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 C20orf194Q5TEA3 1177 aa7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 ATF7IPQ6VMQ6 1270 aa7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 TBC1D9Q6ZT07 1266 aa7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 DZIP1LQ8IYY4 767 aaKnown RBP7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 IFNL2Q8IZJ0 200 aa7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 TSPYL6Q8N831 410 aa7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 KLF16Q9BXK1 252 aaPredicted RBP7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 CHMP4BQ9H444 224 aaKnown RBP7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 TFIP11Q9UBB9 837 aaKnown RBP7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 NOB1Q9ULX3 412 aaKnown RBP7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 COL5A2P05997 1499 aaPredicted RBP7.74□□□□□ -1.17
SMNDC1-204ENST00000471297 IL2RBP14784 551 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 PHKG2P15735 406 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 WDR4P57081 412 aaKnown RBP7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 PIP4K2BP78356 416 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 MAP7D1Q3KQU3 841 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 B4GALNT3Q6L9W6 998 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 UCN2Q96RP3 112 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 CDCA7Q9BWT1 371 aaPredicted RBP7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 BCL2L13Q9BXK5 485 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 C1orf115Q9H7X2 142 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 LGR6Q9HBX8 967 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 PGPEP1Q9NXJ5 209 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 PCDHB11Q9Y5F2 797 aa7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 COL22A1Q8NFW1 1626 aaPredicted RBP7.73□□□□□ -1.17
SMNDC1-204ENST00000471297 RGPD5Q99666 1765 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 BTBD11A6QL63 1104 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 ELL2O00472 640 aaPredicted RBP7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 ZIC2O95409 532 aaPredicted RBP7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 AVPP01185 164 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 HOXB7P09629 217 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 CCDC30Q5VVM6 783 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 LARP1Q6PKG0 1096 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 MPRIPQ6WCQ1 1025 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 FTSJ3Q8IY81 847 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 PLPP7Q8NBV4 271 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 NFATC2IPQ8NCF5 419 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 ZCRB1Q8TBF4 217 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 PANK1Q8TE04 598 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 ITPKCQ96DU7 683 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 DCAF5Q96JK2 942 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 PPP1R12CQ9BZL4 782 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 API5Q9BZZ5 524 aaKnown RBP7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 STRN4Q9NRL3 753 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 BTG4Q9NY30 223 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 MIS18AQ9NYP9 233 aa7.72□□□□□ -1.17
SMNDC1-204ENST00000471297 RGPD2P0DJD1 1756 aa7.71□□□□□ -1.17
SMNDC1-204ENST00000471297 PALM3A6NDB9 673 aaPredicted RBP7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 TRIM27P14373 513 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 TIMP2P16035 220 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 MYT1Q01538 1121 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 MVPQ14764 893 aaKnown RBP7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 TRAF7Q6Q0C0 670 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 SERPINA10Q9UK55 444 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 DDX19BQ9UMR2 479 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 DOLKQ9UPQ8 538 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 PHLPP1O60346 1717 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 ABCA3Q99758 1704 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 PCDH11XQ9BZA7 1347 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 PCDH11YQ9BZA8 1340 aa7.71□□□□□ -1.18
SMNDC1-204ENST00000471297 LRRC37A3O60309 1634 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 COL14A1Q05707 1796 aaKnown RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 MEGF6O75095 1541 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 CAPN5O15484 640 aaPredicted RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 ATP9BO43861 1147 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 LZTS3O60299 673 aaPredicted RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 ADD1P35611 737 aaKnown RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 EIF4A1P60842 406 aaKnown RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 USP4Q13107 963 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 ZNF784Q8NCA9 323 aaPredicted RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 CCDC97Q96F63 343 aaPredicted RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 STK31Q9BXU1 1019 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 ZFAND3Q9H8U3 227 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 SLC52A2Q9HAB3 445 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 THRAP3Q9Y2W1 955 aaKnown RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 PTPRCP08575 1304 aa7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 COL16A1Q07092 1604 aaPredicted RBP7.7□□□□□ -1.18
SMNDC1-204ENST00000471297 ERVV-2B6SEH9 535 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 CYP27B1O15528 508 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 LILRA1O75019 489 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 RLBP1P12271 317 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 LMOD1P29536 600 aaPredicted RBP7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 CABP4P57796 275 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 KRT24Q2M2I5 525 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 OXLD1Q5BKU9 147 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 CC2D2BQ6DHV5 1058 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 DEPDC4Q8N2C3 294 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 CYLDQ9NQC7 956 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 JCADQ9P266 1359 aa7.69□□□□□ -1.18
SMNDC1-204ENST00000471297 USP17L5A8MUK1 530 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 AXIN1O15169 862 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 RFX1P22670 979 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 SCTRP47872 440 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 SMCPP49901 116 aaPredicted RBP7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 ERVK-9P63128 1117 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 CBLBQ13191 982 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 CTC1Q2NKJ3 1217 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 EML3Q32P44 896 aa7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 CENPQQ7L2Z9 268 aaPredicted RBP7.68□□□□□ -1.18
SMNDC1-204ENST00000471297 ITPRIPQ8IWB1 547 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms