RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 MCUR1Q96AQ8 359 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 HVCN1Q96D96 273 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 PYM1Q9BRP8 204 aaKnown RBP7.78□□□□□ -1.16
BRCA1-210ENST00000471181 GDPD2Q9HCC8 539 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 RHOXF2BP0C7M4 288 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 XRCC6P12956 609 aaKnown RBP eCLIP7.78□□□□□ -1.16
BRCA1-210ENST00000471181 KRT5P13647 590 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 GJB2P29033 226 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 CALCOCO2Q13137 446 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 TRPC3Q13507 836 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 SEL1L2Q5TEA6 688 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 MIER3Q7Z3K6 550 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 RHOXF2Q9BQY4 288 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 MRPL46Q9H2W6 279 aaKnown RBP7.78□□□□□ -1.16
BRCA1-210ENST00000471181 EXOC6BQ9Y2D4 811 aa7.78□□□□□ -1.16
BRCA1-210ENST00000471181 NOC2LQ9Y3T9 749 aaKnown RBP7.78□□□□□ -1.16
BRCA1-210ENST00000471181 HPDP32754 393 aaPredicted RBP7.77□□□□□ -1.16
BRCA1-210ENST00000471181 KANK3Q6NY19 840 aa7.77□□□□□ -1.16
BRCA1-210ENST00000471181 CEP128Q6ZU80 1094 aa7.77□□□□□ -1.16
BRCA1-210ENST00000471181 IFT74Q96LB3 600 aa7.77□□□□□ -1.16
BRCA1-210ENST00000471181 IARSP41252 1262 aaKnown RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 WAPLQ7Z5K2 1190 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 GOLGA1Q92805 767 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 JAKMIP2Q96AA8 810 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 ZNF830Q96NB3 372 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 DDX19AQ9NUU7 478 aaKnown RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 RAB11FIP3O75154 756 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 HMGB1P09429 215 aaKnown RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 ZNF622Q969S3 477 aaKnown RBP eCLIP7.77□□□□□ -1.175e-8■■■□□ 17.3
BRCA1-210ENST00000471181 USP16Q9Y5T5 823 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 TSNAXIP1Q2TAA8 658 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC102BQ68D86 513 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 HEATR3Q7Z4Q2 680 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 MICU3Q86XE3 530 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC8Q9H0W5 538 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 A0A1B0GUA9 196 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 C11orf95C9JLR9 678 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 MX1P20591 662 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 IL1RL1Q01638 556 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 PDE4BQ07343 736 aa7.77□□□□□ -1.17
BRCA1-210ENST00000471181 C16orf71Q8IYS4 520 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 SH2B1Q9NRF2 756 aaPredicted RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 RBM27Q9P2N5 1060 aaKnown RBP7.77□□□□□ -1.17
BRCA1-210ENST00000471181 FGD5Q6ZNL6 1462 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 SSFA2P28290 1259 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 MAN1A1P33908 653 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 METAP2P50579 478 aaKnown RBP eCLIP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 ASIC1P78348 528 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 SP4Q02446 784 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 SF3A3Q12874 501 aaKnown RBP eCLIP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 AMOTQ4VCS5 1084 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC62Q6P9F0 684 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 FAM76AQ8TAV0 307 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC7Q96M83 1385 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 HARSP12081 509 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 ATICP31939 592 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 RBBP5Q15291 538 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CTAGE1Q96RT6 745 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CHD1O14646 1710 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 ATP5DP30049 168 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 HAND2P61296 217 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 SMARCC2Q8TAQ2 1214 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 LEO1Q8WVC0 666 aaPredicted RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CHMP6Q96FZ7 201 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 NACA2Q9H009 215 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 GUCA1BQ9UMX6 200 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 MX2P20592 715 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 VPS41P49754 854 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 IFIT5Q13325 482 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CCDC18Q5T9S5 1454 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 PTCD1O75127 700 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 GPR161Q8N6U8 529 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 TRMT112Q9UI30 125 aaKnown RBP7.76□□□□□ -1.17
BRCA1-210ENST00000471181 MTUS1Q9ULD2 1270 aa7.76□□□□□ -1.17
BRCA1-210ENST00000471181 CNGA1P29973 690 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 RAPGEF1Q13905 1077 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 EP400NLQ6ZTU2 488 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 PHLDB2Q86SQ0 1253 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 VCX3AQ9NNX9 186 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 PRDM11Q9NQV5 511 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 TMOD3Q9NYL9 352 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 ZBTB24O43167 697 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-210ENST00000471181 TSPY3P0CV98 308 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 TSPY8P0CW00 308 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 MIS18AQ9NYP9 233 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 STK10O94804 968 aaKnown RBP7.75□□□□□ -1.17
BRCA1-210ENST00000471181 COG7P83436 770 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 MFSD6Q6ZSS7 791 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 NEK11Q8NG66 645 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 RABEP2Q9H5N1 569 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 TTLL3Q9Y4R7 772 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 F8W031 263 aaPredicted RBP7.75□□□□□ -1.17
BRCA1-210ENST00000471181 PHEXP78562 749 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 ATP2A3Q93084 1043 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 SUFUQ9UMX1 484 aa7.75□□□□□ -1.17
BRCA1-210ENST00000471181 MAFGO15525 162 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SYKP43405 635 aa7.74□□□□□ -1.17
BRCA1-210ENST00000471181 SRGAP1Q7Z6B7 1085 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms