RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 ADGRL2O95490 1459 aa10.09□□□□□ -0.79
PTP4A1-202ENST00000470661 EIF2AK4Q9P2K8 1649 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 NEURL1BA8MQ27 555 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 ARAFP10398 606 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 GRNP28799 593 aaKnown RBP10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 INPP5BP32019 993 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 KCNQ4P56696 695 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 TREML1Q86YW5 311 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 KLF15Q9UIH9 416 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 USP20Q9Y2K6 914 aa10.08□□□□□ -0.8
PTP4A1-202ENST00000470661 LTBP4Q8N2S1 1624 aa10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 ZNF142P52746 1687 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 UGGT1Q9NYU2 1555 aa10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 NUP155O75694 1391 aa10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 ARHGEF15O94989 841 aa10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 ZNF468Q5VIY5 522 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 GDF2Q9UK05 429 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 PRDM15P57071 1507 aaPredicted RBP10.07□□□□□ -0.8
PTP4A1-202ENST00000470661 SPATA31D1Q6ZQQ2 1576 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 FAM181BA6NEQ2 426 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 OIP5O43482 229 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 ARSDP51689 593 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 SLCO4C1Q6ZQN7 724 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 SYT9Q86SS6 491 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 GOLGA6L1Q8N7Z2 621 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 SLC26A8Q96RN1 970 aa10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 DNMT3AQ9Y6K1 912 aaPredicted RBP10.06□□□□□ -0.8
PTP4A1-202ENST00000470661 NEURL4Q96JN8 1562 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 PLA2R1Q13018 1463 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 NLRP1Q9C000 1473 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 DEPDC5O75140 1603 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 SHISA8B8ZZ34 492 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 UBAP1LF5GYI3 381 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 OPLAHO14841 1288 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 BRD2P25440 801 aaKnown RBP10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 ADH6P28332 368 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 FCHSD1Q86WN1 690 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 GALNT6Q8NCL4 622 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 FAM135AQ9P2D6 1515 aa10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 NPHP4O75161 1426 aaPredicted RBP10.05□□□□□ -0.8
PTP4A1-202ENST00000470661 PIP4K2BP78356 416 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 MTMR3Q13615 1198 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 RGL4Q8IZJ4 473 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 GTF3C2Q8WUA4 911 aaPredicted RBP10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 BHMTQ93088 406 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 STIM2Q9P246 746 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 ADAMTS8Q9UP79 889 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 ARHGAP31Q2M1Z3 1444 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 VWDEQ8N2E2 1590 aa10.04□□□□□ -0.8
PTP4A1-202ENST00000470661 ROCK1Q13464 1354 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 ZBTB39O15060 712 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 SYNMO15061 1565 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 EPB42P16452 691 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 NEDD1Q8NHV4 660 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 RRBP1Q9P2E9 1410 aaKnown RBP10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 PIK3C2BO00750 1634 aa10.03□□□□□ -0.8
PTP4A1-202ENST00000470661 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.8
PTP4A1-202ENST00000470661 NOS1P29475 1434 aa10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 EPXP11678 715 aa10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 HELQQ8TDG4 1101 aa10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 GSX2Q9BZM3 304 aa10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 AVENQ9NQS1 362 aaPredicted RBP10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 UBR1Q8IWV7 1749 aa10.02□□□□□ -0.81
PTP4A1-202ENST00000470661 KRT25Q7Z3Z0 450 aa10.01□□□□□ -0.81
PTP4A1-202ENST00000470661 CMTR1Q8N1G2 835 aaKnown RBP10.01□□□□□ -0.81
PTP4A1-202ENST00000470661 ENAMQ9NRM1 1142 aa10.01□□□□□ -0.81
PTP4A1-202ENST00000470661 EID1Q9Y6B2 187 aa10.01□□□□□ -0.81
PTP4A1-202ENST00000470661 LMTK2Q8IWU2 1503 aa10.01□□□□□ -0.81
PTP4A1-202ENST00000470661 TMEM2Q9UHN6 1383 aa10.01□□□□□ -0.81
PTP4A1-202ENST00000470661 NFKB1P19838 968 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 NEUROD1Q13562 356 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 CCINQ13939 588 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 B4GALNT3Q6L9W6 998 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 PNMA5Q96PV4 448 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 ANO2Q9NQ90 1003 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 LRRC4BQ9NT99 713 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 EFCAB6Q5THR3 1501 aa10□□□□□ -0.81
PTP4A1-202ENST00000470661 NAIPQ13075 1403 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 SIN3BO75182 1162 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 ABL1P00519 1130 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 AMPD1P23109 780 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 ZAP70P43403 619 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 TBC1D8BQ0IIM8 1120 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 ZNF211Q13398 564 aaPredicted RBP9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 ATCAYQ86WG3 371 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 SLC52A1Q9NWF4 448 aa9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 POLR1AO95602 1720 aaPredicted RBP9.99□□□□□ -0.81
PTP4A1-202ENST00000470661 STRCP1A6NGW2 1772 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 MPSTP25325 297 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 MARSP56192 900 aaKnown RBP9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 ABTB2Q8N961 1025 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 IGFLR1Q9H665 355 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 E9PCH4 1651 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 MED14O60244 1454 aa9.98□□□□□ -0.81
PTP4A1-202ENST00000470661 ARHGAP23Q9P227 1491 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms