RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 CACTIN-AS1Q8N1I8 211 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 TTC9Q92623 222 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 BHMTQ93088 406 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 SPACA7Q96KW9 195 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 CAPN10Q9HC96 672 aa8.4□□□□□ -1.06
RBM39-227ENST00000470563 TTF2Q9UNY4 1162 aaKnown RBP8.4□□□□□ -1.06
RBM39-227ENST00000470563 PPFIA3O75145 1194 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 GRIN2CQ14957 1233 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 SCARA3Q6AZY7 606 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 RHOVQ96L33 236 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 PBX4Q9BYU1 374 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 FRRS1LQ9P0K9 344 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 INPP5FQ9Y2H2 1132 aa8.39□□□□□ -1.07
RBM39-227ENST00000470563 ZBTB42B2RXF5 422 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 ARAFP10398 606 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 FCGRTP55899 365 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 ARID5AQ03989 594 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 RBL2Q08999 1139 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 COL9A2Q14055 689 aaPredicted RBP8.38□□□□□ -1.07
RBM39-227ENST00000470563 DTHD1Q6ZMT9 781 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 SV2AQ7L0J3 742 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 CCDC84Q86UT8 332 aaPredicted RBP8.38□□□□□ -1.07
RBM39-227ENST00000470563 VPS37DQ86XT2 251 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 SEC16BQ96JE7 1060 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 TMEM74Q96NL1 305 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 TANGO6Q9C0B7 1094 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 ZNF576Q9H609 170 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 GMPR2Q9P2T1 348 aaKnown RBP8.38□□□□□ -1.07
RBM39-227ENST00000470563 PRKAG2Q9UGJ0 569 aa8.38□□□□□ -1.07
RBM39-227ENST00000470563 PDE2AO00408 941 aaPredicted RBP8.37□□□□□ -1.07
RBM39-227ENST00000470563 EIF4EBP3O60516 100 aaPredicted RBP8.37□□□□□ -1.07
RBM39-227ENST00000470563 FGRP09769 529 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 GRIA4P48058 902 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 CCDC85BQ15834 202 aaPredicted RBP8.37□□□□□ -1.07
RBM39-227ENST00000470563 Q6ZNB5 142 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 GPRASP2Q96D09 838 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 NECAB3Q96P71 396 aaPredicted RBP8.37□□□□□ -1.07
RBM39-227ENST00000470563 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 KBTBD4Q9NVX7 518 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 PCDHGB7Q9Y5F8 929 aa8.37□□□□□ -1.07
RBM39-227ENST00000470563 A0A096LPE4 126 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 A0A1W2PPZ6 126 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 ATF4P18848 351 aaPredicted RBP8.36□□□□□ -1.07
RBM39-227ENST00000470563 CTBSQ01459 385 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 SOGA3Q5TF21 947 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 RELL1Q8IUW5 271 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 NT5C1AQ9BXI3 368 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 RBSNQ9H1K0 784 aa8.36□□□□□ -1.07
RBM39-227ENST00000470563 LCE2BO14633 110 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 GREM1O60565 184 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 ATP2B1P20020 1258 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 MAP2K3P46734 347 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 TNNI2P48788 182 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 LMNB2Q03252 620 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 AGMOQ6ZNB7 445 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 SYT9Q86SS6 491 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 PHC3Q8NDX5 983 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 COPRSQ9NQ92 184 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 DNAJB12Q9NXW2 375 aaKnown RBP8.35□□□□□ -1.07
RBM39-227ENST00000470563 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
RBM39-227ENST00000470563 C2CD2LO14523 706 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 ENC1O14682 589 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
RBM39-227ENST00000470563 GARTP22102 1010 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 ADH6P28332 368 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 LIG3P49916 1009 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 PAK2Q13177 524 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 KIAA0825Q8IV33 1275 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 BSNDQ8WZ55 320 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 NSUN5Q96P11 429 aaKnown RBP8.34□□□□□ -1.07
RBM39-227ENST00000470563 LRRC3Q9BY71 257 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 SEC31BQ9NQW1 1179 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 PRR12Q9ULL5 1215 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 STRIP2Q9ULQ0 834 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 SOX13Q9UN79 622 aa8.34□□□□□ -1.07
RBM39-227ENST00000470563 SMNDC1O75940 238 aaKnown RBP eCLIP8.33□□□□□ -1.08
RBM39-227ENST00000470563 B3GALT4O96024 378 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 GHRHP01286 108 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 ACPPP15309 386 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 CANXP27824 592 aaKnown RBP8.33□□□□□ -1.08
RBM39-227ENST00000470563 EIF4A3P38919 411 aaKnown RBP8.33□□□□□ -1.08
RBM39-227ENST00000470563 MCF2L2Q86YR7 1114 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 SPON2Q9BUD6 331 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 HIRIP3Q9BW71 556 aaPredicted RBP8.33□□□□□ -1.08
RBM39-227ENST00000470563 RASSF4Q9H2L5 321 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 CLEC4MQ9H2X3 399 aaPredicted RBP8.33□□□□□ -1.08
RBM39-227ENST00000470563 ADAMTS1Q9UHI8 967 aa8.33□□□□□ -1.08
RBM39-227ENST00000470563 BMP4P12644 408 aa8.32□□□□□ -1.08
RBM39-227ENST00000470563 SOX9P48436 509 aa8.32□□□□□ -1.08
RBM39-227ENST00000470563 NBPF6Q5VWK0 638 aa8.32□□□□□ -1.08
RBM39-227ENST00000470563 RAB44Q7Z6P3 723 aaPredicted RBP8.32□□□□□ -1.08
RBM39-227ENST00000470563 NBPF4Q96M43 638 aa8.32□□□□□ -1.08
RBM39-227ENST00000470563 SLC6A14Q9UN76 642 aa8.32□□□□□ -1.08
RBM39-227ENST00000470563 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
RBM39-227ENST00000470563 AKAP2Q9Y2D5 859 aa8.32□□□□□ -1.08
RBM39-227ENST00000470563 GAS6Q14393 721 aa8.31□□□□□ -1.08
RBM39-227ENST00000470563 VWA5B2Q8N398 1253 aa8.31□□□□□ -1.08
RBM39-227ENST00000470563 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
RBM39-227ENST00000470563 UBE2OQ9C0C9 1292 aaKnown RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms