RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 C15orf52Q6ZUT6 534 aaKnown RBP18.36■□□□□ 0.53
COL4A5-203ENST00000470339 PAG1Q9NWQ8 432 aa18.36■□□□□ 0.53
COL4A5-203ENST00000470339 ATP6V0A2Q9Y487 856 aa18.36■□□□□ 0.53
COL4A5-203ENST00000470339 CACNA1SQ13698 1873 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 PPEF1O14829 653 aaPredicted RBP18.35■□□□□ 0.53
COL4A5-203ENST00000470339 POLD1P28340 1107 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 PHKA1P46020 1223 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 R3HDM1Q15032 1099 aaKnown RBP18.35■□□□□ 0.53
COL4A5-203ENST00000470339 CAVIN4Q5BKX8 364 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 KBTBD3Q8NAB2 608 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 RUFY2Q8WXA3 655 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 CNKSR1Q969H4 720 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 GNL3LQ9NVN8 582 aaKnown RBP18.35■□□□□ 0.53
COL4A5-203ENST00000470339 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 LTBP1Q14766 1721 aa18.35■□□□□ 0.53
COL4A5-203ENST00000470339 MYH13Q9UKX3 1938 aa18.34■□□□□ 0.53
COL4A5-203ENST00000470339 SNAP23O00161 211 aa18.34■□□□□ 0.53
COL4A5-203ENST00000470339 ATP2B4P23634 1241 aa18.34■□□□□ 0.53
COL4A5-203ENST00000470339 LRRFIP1Q32MZ4 808 aaKnown RBP18.34■□□□□ 0.53
COL4A5-203ENST00000470339 FBXO33Q7Z6M2 555 aa18.34■□□□□ 0.53
COL4A5-203ENST00000470339 DNAJC2Q99543 621 aaKnown RBP18.34■□□□□ 0.53
COL4A5-203ENST00000470339 ESYT1Q9BSJ8 1104 aa18.34■□□□□ 0.53
COL4A5-203ENST00000470339 SEMA3EO15041 775 aa18.33■□□□□ 0.52
COL4A5-203ENST00000470339 EPB41L2O43491 1005 aaKnown RBP18.33■□□□□ 0.52
COL4A5-203ENST00000470339 REC8O95072 547 aa18.33■□□□□ 0.52
COL4A5-203ENST00000470339 TTF1Q15361 905 aaPredicted RBP18.33■□□□□ 0.52
COL4A5-203ENST00000470339 FSD1Q9BTV5 496 aa18.33■□□□□ 0.52
COL4A5-203ENST00000470339 TMX4Q9H1E5 349 aaPredicted RBP18.33■□□□□ 0.52
COL4A5-203ENST00000470339 DIAPH3Q9NSV4 1193 aa18.33■□□□□ 0.52
COL4A5-203ENST00000470339 IRS2Q9Y4H2 1338 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 GOLIM4O00461 696 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 ZBTB7AO95365 584 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 MCAMP43121 646 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 BCAMP50895 628 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 GPSM2P81274 684 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 FKBP4Q02790 459 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL4A5-203ENST00000470339 SCARF1Q14162 830 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 ZNF622Q969S3 477 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL4A5-203ENST00000470339 FAM84BQ96KN1 310 aaPredicted RBP18.32■□□□□ 0.52
COL4A5-203ENST00000470339 SLX4Q8IY92 1834 aa18.32■□□□□ 0.52
COL4A5-203ENST00000470339 PDS5AQ29RF7 1337 aaKnown RBP18.31■□□□□ 0.52
COL4A5-203ENST00000470339 DOCK2Q92608 1830 aa18.31■□□□□ 0.52
COL4A5-203ENST00000470339 MFAP1P55081 439 aaKnown RBP18.31■□□□□ 0.52
COL4A5-203ENST00000470339 SPATA5Q8NB90 893 aa18.31■□□□□ 0.52
COL4A5-203ENST00000470339 GGA1Q9UJY5 639 aa18.31■□□□□ 0.52
COL4A5-203ENST00000470339 NSFL1CQ9UNZ2 370 aaKnown RBP18.31■□□□□ 0.52
COL4A5-203ENST00000470339 SGSM2O43147 1006 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 ZFYP08048 801 aaPredicted RBP18.3■□□□□ 0.52
COL4A5-203ENST00000470339 HIBADHP31937 336 aaKnown RBP18.3■□□□□ 0.52
COL4A5-203ENST00000470339 ZAP70P43403 619 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 TGFB2P61812 414 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 CC2D2BQ6DHV5 1058 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 VPS37DQ86XT2 251 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 EDC3Q96F86 508 aaKnown RBP18.3■□□□□ 0.52
COL4A5-203ENST00000470339 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 SNRKQ9NRH2 765 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 HMG20BQ9P0W2 317 aa18.3■□□□□ 0.52
COL4A5-203ENST00000470339 ATF5Q9Y2D1 282 aaPredicted RBP18.3■□□□□ 0.52
COL4A5-203ENST00000470339 MYO5AQ9Y4I1 1855 aaKnown RBP18.3■□□□□ 0.52
COL4A5-203ENST00000470339 RAD50Q92878 1312 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 WTIPA6NIX2 430 aaPredicted RBP18.29■□□□□ 0.52
COL4A5-203ENST00000470339 CHRNA5P30532 468 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 GYG1P46976 350 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 RASGRF1Q13972 1273 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 GRIPAP1Q4V328 841 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 SGIP1Q9BQI5 828 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
COL4A5-203ENST00000470339 UFL1O94874 794 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 CYP2E1P05181 493 aaPredicted RBP18.28■□□□□ 0.52
COL4A5-203ENST00000470339 RBM25P49756 843 aaKnown RBP18.28■□□□□ 0.52
COL4A5-203ENST00000470339 ZSCAN25Q6NSZ9 544 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 PRPF40BQ6NWY9 871 aaKnown RBP18.28■□□□□ 0.52
COL4A5-203ENST00000470339 MPNDQ8N594 471 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 C22orf23Q9BZE7 217 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.28■□□□□ 0.52
COL4A5-203ENST00000470339 KIAA1551Q9HCM1 1747 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
COL4A5-203ENST00000470339 RNF113AO15541 343 aaKnown RBP18.27■□□□□ 0.52
COL4A5-203ENST00000470339 IGSF3O75054 1194 aa18.27■□□□□ 0.52
COL4A5-203ENST00000470339 CWC27Q6UX04 472 aaKnown RBP18.27■□□□□ 0.52
COL4A5-203ENST00000470339 ZNF804AQ7Z570 1209 aa18.27■□□□□ 0.52
COL4A5-203ENST00000470339 C7orf43Q8WVR3 580 aa18.27■□□□□ 0.52
COL4A5-203ENST00000470339 ANTXR1Q9H6X2 564 aa18.27■□□□□ 0.52
COL4A5-203ENST00000470339 NMIQ13287 307 aaPredicted RBP18.26■□□□□ 0.51
COL4A5-203ENST00000470339 TTLL6Q8N841 843 aa18.26■□□□□ 0.51
COL4A5-203ENST00000470339 HELLSQ9NRZ9 838 aa18.26■□□□□ 0.51
COL4A5-203ENST00000470339 POLLQ9UGP5 575 aa18.26■□□□□ 0.51
COL4A5-203ENST00000470339 CD2APQ9Y5K6 639 aa18.26■□□□□ 0.51
COL4A5-203ENST00000470339 BRCA1P38398 1863 aaKnown RBP18.25■□□□□ 0.51
COL4A5-203ENST00000470339 PSDA5PKW4 1024 aaPredicted RBP18.25■□□□□ 0.51
COL4A5-203ENST00000470339 KCNA3P22001 575 aa18.25■□□□□ 0.51
COL4A5-203ENST00000470339 KLRK1P26718 216 aa18.25■□□□□ 0.51
COL4A5-203ENST00000470339 ZMYM1Q5SVZ6 1142 aa18.25■□□□□ 0.51
COL4A5-203ENST00000470339 TMED8Q6PL24 325 aaPredicted RBP18.25■□□□□ 0.51
COL4A5-203ENST00000470339 PI16Q6UXB8 463 aa18.25■□□□□ 0.51
COL4A5-203ENST00000470339 DPP8Q6V1X1 898 aaPredicted RBP18.25■□□□□ 0.51
COL4A5-203ENST00000470339 KIAA1211Q6ZU35 1233 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms