RNA–Protein interactions for RNA: ENST00000470259.1

ITGA6-209, Transcript of integrin subunit alpha 6, humanhuman

TSL 3

Gene ITGA6, Length 365 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-209ENST00000470259 H2AFB2P0C5Z0 115 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 NPR3P17342 541 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 EHHADHQ08426 723 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 POP1Q99575 1024 aaKnown RBP7.73□□□□□ -1.17
ITGA6-209ENST00000470259 CARD10Q9BWT7 1032 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 SALL4Q9UJQ4 1053 aa7.73□□□□□ -1.17
ITGA6-209ENST00000470259 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
ITGA6-209ENST00000470259 ACPPP15309 386 aa7.72□□□□□ -1.17
ITGA6-209ENST00000470259 ITGB7P26010 798 aa7.72□□□□□ -1.17
ITGA6-209ENST00000470259 CD68P34810 354 aaPredicted RBP7.72□□□□□ -1.17
ITGA6-209ENST00000470259 CABP4P57796 275 aa7.72□□□□□ -1.17
ITGA6-209ENST00000470259 ZMYM1Q5SVZ6 1142 aa7.72□□□□□ -1.17
ITGA6-209ENST00000470259 CCDC87Q9NVE4 849 aa7.72□□□□□ -1.17
ITGA6-209ENST00000470259 PDE2AO00408 941 aaPredicted RBP7.71□□□□□ -1.18
ITGA6-209ENST00000470259 FZD6O60353 706 aa7.71□□□□□ -1.18
ITGA6-209ENST00000470259 TRPA1O75762 1119 aa7.71□□□□□ -1.18
ITGA6-209ENST00000470259 PRSS36Q5K4E3 855 aa7.71□□□□□ -1.18
ITGA6-209ENST00000470259 GALNT11Q8NCW6 608 aa7.71□□□□□ -1.18
ITGA6-209ENST00000470259 MEGF10Q96KG7 1140 aa7.71□□□□□ -1.18
ITGA6-209ENST00000470259 DZANK1Q9NVP4 752 aa7.71□□□□□ -1.18
ITGA6-209ENST00000470259 F8W735 103 aaPredicted RBP7.7□□□□□ -1.18
ITGA6-209ENST00000470259 H3BRB1 525 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 FSCN2O14926 492 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 EREGO14944 169 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 TNFRSF21O75509 655 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 GLB1P16278 677 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 EPHA1P21709 976 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 SERPINB4P48594 390 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 ADAMTSL4Q6UY14 1074 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 GLYCTKQ8IVS8 523 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 AGGF1Q8N302 714 aaeCLIP7.7□□□□□ -1.18
ITGA6-209ENST00000470259 TMEM130Q8N3G9 435 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 SNX29Q8TEQ0 813 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 SSBP4Q9BWG4 385 aaPredicted RBP7.7□□□□□ -1.18
ITGA6-209ENST00000470259 CHRDQ9H2X0 955 aa7.7□□□□□ -1.18
ITGA6-209ENST00000470259 TUT1Q9H6E5 874 aaKnown RBP7.7□□□□□ -1.18
ITGA6-209ENST00000470259 FOXD3Q9UJU5 478 aaPredicted RBP7.7□□□□□ -1.18
ITGA6-209ENST00000470259 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 ICMTO60725 284 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 EDN3P14138 238 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 PDE4CQ08493 712 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 ACAD11Q709F0 780 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 KLHL23Q8NBE8 558 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 OSMRQ99650 979 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 ADAM19Q9H013 955 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 SEC31BQ9NQW1 1179 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 EGFL7Q9UHF1 273 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 BRPF3Q9ULD4 1205 aa7.69□□□□□ -1.18
ITGA6-209ENST00000470259 H3BRJ5 948 aa7.68□□□□□ -1.18
ITGA6-209ENST00000470259 DUOXA2Q1HG44 320 aa7.68□□□□□ -1.18
ITGA6-209ENST00000470259 Q8N3U1 123 aa7.68□□□□□ -1.18
ITGA6-209ENST00000470259 RETREG2Q8NC44 543 aa7.68□□□□□ -1.18
ITGA6-209ENST00000470259 SLC7A3Q8WY07 619 aa7.68□□□□□ -1.18
ITGA6-209ENST00000470259 NFKBIEO00221 500 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 ARL4DP49703 201 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 FOXD4L6Q3SYB3 417 aaPredicted RBP7.67□□□□□ -1.18
ITGA6-209ENST00000470259 FOXD4L3Q6VB84 417 aaPredicted RBP7.67□□□□□ -1.18
ITGA6-209ENST00000470259 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.67□□□□□ -1.18
ITGA6-209ENST00000470259 KLHDC7BQ96G42 594 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 HHIPQ96QV1 700 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 KCNK4Q9NYG8 393 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 TIMELESSQ9UNS1 1208 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 AMOTL2Q9Y2J4 779 aa7.67□□□□□ -1.18
ITGA6-209ENST00000470259 DDX3YO15523 660 aaKnown RBP7.66□□□□□ -1.18
ITGA6-209ENST00000470259 PIP4K2BP78356 416 aa7.66□□□□□ -1.18
ITGA6-209ENST00000470259 GJD3Q8N144 294 aa7.66□□□□□ -1.18
ITGA6-209ENST00000470259 TMEM102Q8N9M5 508 aaPredicted RBP7.66□□□□□ -1.18
ITGA6-209ENST00000470259 ASAP3Q8TDY4 903 aa7.66□□□□□ -1.18
ITGA6-209ENST00000470259 ZKSCAN3Q9BRR0 538 aa7.66□□□□□ -1.18
ITGA6-209ENST00000470259 ZFYVE28Q9HCC9 887 aa7.66□□□□□ -1.18
ITGA6-209ENST00000470259 NDUFB5O43674 189 aa7.65□□□□□ -1.18
ITGA6-209ENST00000470259 WISP1O95388 367 aa7.65□□□□□ -1.18
ITGA6-209ENST00000470259 POLR3DP05423 398 aaPredicted RBP7.65□□□□□ -1.18
ITGA6-209ENST00000470259 DZIP1LQ8IYY4 767 aaKnown RBP7.65□□□□□ -1.18
ITGA6-209ENST00000470259 NXPE3Q969Y0 559 aa7.65□□□□□ -1.18
ITGA6-209ENST00000470259 CEP41Q9BYV8 373 aa7.65□□□□□ -1.18
ITGA6-209ENST00000470259 NLRP12P59046 1061 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 XP32Q5T750 250 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 PRR23CQ6ZRP0 262 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 TMC1Q8TDI8 760 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 BSNDQ8WZ55 320 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 WNT8BQ93098 351 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 LATS2Q9NRM7 1088 aa7.64□□□□□ -1.19
ITGA6-209ENST00000470259 NEFLP07196 543 aa7.63□□□□□ -1.19
ITGA6-209ENST00000470259 IKBKEQ14164 716 aa7.63□□□□□ -1.19
ITGA6-209ENST00000470259 UBASH3BQ8TF42 649 aa7.63□□□□□ -1.19
ITGA6-209ENST00000470259 FOXD4L4Q8WXT5 416 aaPredicted RBP7.63□□□□□ -1.19
ITGA6-209ENST00000470259 OSGEPQ9NPF4 335 aa7.63□□□□□ -1.19
ITGA6-209ENST00000470259 SOX13Q9UN79 622 aa7.63□□□□□ -1.19
ITGA6-209ENST00000470259 SART1O43290 800 aaKnown RBP7.62□□□□□ -1.19
ITGA6-209ENST00000470259 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
ITGA6-209ENST00000470259 Q6ZS46 218 aa7.62□□□□□ -1.19
ITGA6-209ENST00000470259 KIAA1211Q6ZU35 1233 aa7.62□□□□□ -1.19
ITGA6-209ENST00000470259 CCER1Q8TC90 406 aaPredicted RBP7.62□□□□□ -1.19
ITGA6-209ENST00000470259 UBL7Q96S82 380 aaPredicted RBP7.62□□□□□ -1.19
ITGA6-209ENST00000470259 ADAM11O75078 769 aa7.61□□□□□ -1.19
ITGA6-209ENST00000470259 PDE3BQ13370 1112 aa7.61□□□□□ -1.19
ITGA6-209ENST00000470259 SOX1O00570 391 aaPredicted RBP7.6□□□□□ -1.19
ITGA6-209ENST00000470259 DHX15O43143 795 aaKnown RBP7.6□□□□□ -1.19
ITGA6-209ENST00000470259 ARHGAP4P98171 946 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms