RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 EIF3CQ99613 913 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 PUF60Q9UHX1 559 aaKnown RBP11.04□□□□□ -0.64
NHLRC3-203ENST00000470258 N4BP1O75113 896 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 HDGFL1Q5TGJ6 251 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 Q6ZUG5 572 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 MAP4K1Q92918 833 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 TMEM131LA2VDJ0 1609 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 EVI5LQ96CN4 794 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 SIRT1Q96EB6 747 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 UBXN6Q9BZV1 441 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 HDAC5Q9UQL6 1122 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 FAN1Q9Y2M0 1017 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 TTC41PQ6P2S7 1318 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 ZSCAN12O43309 604 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 GUCY2CP25092 1073 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 UBASH3AP57075 661 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 TAF7Q15545 349 aaPredicted RBP11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 HSP90AB4PQ58FF6 505 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 CCDC12Q8WUD4 166 aaPredicted RBP11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 MRPS27Q92552 414 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 GOLGA1Q92805 767 aa11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 SEC62Q99442 399 aaKnown RBP11.03□□□□□ -0.64
NHLRC3-203ENST00000470258 ANXA1P04083 346 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 TUBB4AP04350 444 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 MAGEA9P43362 315 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 NDUFA8P51970 172 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 DHX58Q96C10 678 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 ZNF396Q96N95 335 aaPredicted RBP11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 SUGCTQ9HAC7 445 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 PLEKHG2Q9H7P9 1386 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 TUBGCP6Q96RT7 1819 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 CRB1P82279 1406 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 SLC3A2P08195 630 aaKnown RBP11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 TOP1P11387 765 aaKnown RBP11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 HSP90B2PQ58FF3 399 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 NCAPGQ9BPX3 1015 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 KIAA1468Q9P260 1216 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 RCOR1Q9UKL0 485 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 PPP2R2CQ9Y2T4 447 aa11.02□□□□□ -0.65
NHLRC3-203ENST00000470258 POLA2Q14181 598 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 STK38Q15208 465 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 JAKMIP3Q5VZ66 844 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 FBXO31Q5XUX0 539 aaPredicted RBP11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 TTLL5Q6EMB2 1281 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 ZNF589Q86UQ0 364 aaPredicted RBP11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 DPF2Q92785 391 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 DESI2Q9BSY9 194 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 PRR29P0C7W0 189 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 ERC1Q8IUD2 1116 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 ENGASEQ8NFI3 743 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 EDC3Q96F86 508 aaKnown RBP11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 NCOA5Q9HCD5 579 aaKnown RBP11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 PCDHA7Q9UN72 937 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 VWA3AA6NCI4 1184 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 GIGYF1O75420 1035 aaPredicted RBP11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 POLR3DP05423 398 aaPredicted RBP11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 APOBRQ0VD83 1088 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 SCRN1Q12765 414 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 NUTM2GQ5VZR2 741 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 MICALL1Q8N3F8 863 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
NHLRC3-203ENST00000470258 MAP3K5Q99683 1374 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 TMEM232C9JQI7 657 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 RHOXF2BP0C7M4 288 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 ADD1P35611 737 aaKnown RBP11□□□□□ -0.65
NHLRC3-203ENST00000470258 PPM1EQ8WY54 764 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 RABGGTAQ92696 567 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 MPHOSPH8Q99549 860 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 RHOXF2Q9BQY4 288 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 CCDC9Q9Y3X0 531 aaKnown RBP11□□□□□ -0.65
NHLRC3-203ENST00000470258 MAP3K19Q56UN5 1328 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 PTPDC1A2A3K4 754 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 EIF3JO75822 258 aaKnown RBP11□□□□□ -0.65
NHLRC3-203ENST00000470258 OTUD7BQ6GQQ9 843 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 EP400NLQ6ZTU2 488 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 KCNB2Q92953 911 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 NUDT16Q96DE0 195 aaKnown RBP11□□□□□ -0.65
NHLRC3-203ENST00000470258 IRX2Q9BZI1 471 aaPredicted RBP11□□□□□ -0.65
NHLRC3-203ENST00000470258 BRMS1Q9HCU9 246 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 EDC4Q6P2E9 1401 aaKnown RBP11□□□□□ -0.65
NHLRC3-203ENST00000470258 SLIT1O75093 1534 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 NEXMIFQ5QGS0 1516 aa11□□□□□ -0.65
NHLRC3-203ENST00000470258 PI4KAP2A4QPH2 592 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 MYCNP04198 464 aaPredicted RBP10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 TXLNAP40222 546 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 PI4KAP1Q8N8J0 262 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 BICC1Q9H694 974 aaKnown RBP10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 PSD3Q9NYI0 1048 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 C9orf78Q9NZ63 289 aaPredicted RBP10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 ATP2B1P20020 1258 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 PSME1Q06323 249 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 FMR1NBQ8N0W7 255 aaPredicted RBP10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 LZTFL1Q9NQ48 299 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 MRFAP1Q9Y605 127 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 NDUFB9Q9Y6M9 179 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 CCDC151A5D8V7 595 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 KCNJ6P48051 423 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 MAP3K9P80192 1104 aa10.99□□□□□ -0.65
NHLRC3-203ENST00000470258 MTX1Q13505 466 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms