RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 PRPF40AO75400 957 aaKnown RBP9.57□□□□□ -0.88
SMC4-212ENST00000470240 RGS20O76081 388 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 BRD1O95696 1058 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 MYL6BP14649 208 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 PROSER3Q2NL68 480 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 XAGE3Q8WTP9 111 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 SUCLG2Q96I99 432 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 MYD88Q99836 296 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 UPF3BQ9BZI7 483 aaKnown RBP9.57□□□□□ -0.88
SMC4-212ENST00000470240 TM6SF1Q9BZW5 370 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 BICC1Q9H694 974 aaKnown RBP9.57□□□□□ -0.88
SMC4-212ENST00000470240 GPCPD1Q9NPB8 672 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 LMBRD1Q9NUN5 540 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 PALD1Q9ULE6 856 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 SMC3Q9UQE7 1217 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 CYP46A1Q9Y6A2 500 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 COL15A1P39059 1388 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 RFX7Q2KHR2 1363 aa9.57□□□□□ -0.88
SMC4-212ENST00000470240 SPATA31A3Q5VYP0 1347 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 MEGF6O75095 1541 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 GGCXP38435 758 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 GCGRP47871 477 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 GCKRQ14397 625 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 KRT32Q14532 448 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 PUS10Q3MIT2 529 aaKnown RBP9.56□□□□□ -0.88
SMC4-212ENST00000470240 VPS53Q5VIR6 699 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 COPS6Q7L5N1 327 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 NFATC2IPQ8NCF5 419 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 LSG1Q9H089 658 aaKnown RBP9.56□□□□□ -0.88
SMC4-212ENST00000470240 PDRG1Q9NUG6 133 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 HMG20BQ9P0W2 317 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 SNX14Q9Y5W7 946 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 CCDC171Q6TFL3 1326 aa9.56□□□□□ -0.88
SMC4-212ENST00000470240 LETM1O95202 739 aaPredicted RBP9.55□□□□□ -0.88
SMC4-212ENST00000470240 CASTP20810 708 aaKnown RBP9.55□□□□□ -0.88
SMC4-212ENST00000470240 PDCP20941 246 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 FUT2Q10981 343 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 SLC39A6Q13433 755 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 TTLL12Q14166 644 aaPredicted RBP9.55□□□□□ -0.88
SMC4-212ENST00000470240 ZSCAN23Q3MJ62 389 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 PLBD2Q8NHP8 589 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 NKX2-3Q8TAU0 364 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 PRDM11Q9NQV5 511 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 ARFGEF2Q9Y6D5 1785 aa9.55□□□□□ -0.88
SMC4-212ENST00000470240 TLL1O43897 1013 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 LRRFIP1Q32MZ4 808 aaKnown RBP9.54□□□□□ -0.88
SMC4-212ENST00000470240 GRIPAP1Q4V328 841 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 PPP1R18Q6NYC8 613 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 TOM1L2Q6ZVM7 507 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 TICAM2Q86XR7 235 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 CHMP4CQ96CF2 233 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 ZNF496Q96IT1 587 aaPredicted RBP9.54□□□□□ -0.88
SMC4-212ENST00000470240 JAKMIP1Q96N16 626 aaKnown RBP9.54□□□□□ -0.88
SMC4-212ENST00000470240 PANK2Q9BZ23 570 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 COPRSQ9NQ92 184 aa9.54□□□□□ -0.88
SMC4-212ENST00000470240 PA2G4Q9UQ80 394 aaKnown RBP9.54□□□□□ -0.88
SMC4-212ENST00000470240 PRAMEF22A3QJZ6 481 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 ERVV-2B6SEH9 535 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 CD46P15529 392 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 ATP6V1AP38606 617 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 AK2P54819 239 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 PKP1Q13835 747 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 CHRNA2Q15822 529 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 FOXD4L5Q5VV16 416 aaPredicted RBP9.53□□□□□ -0.88
SMC4-212ENST00000470240 PRPF40BQ6NWY9 871 aaKnown RBP9.53□□□□□ -0.88
SMC4-212ENST00000470240 FOXD4L4Q8WXT5 416 aaPredicted RBP9.53□□□□□ -0.88
SMC4-212ENST00000470240 SIL1Q9H173 461 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 WDR17Q8IZU2 1322 aa9.53□□□□□ -0.88
SMC4-212ENST00000470240 A0A087WZG4 1122 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 STX6O43752 255 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 IGKV5-2P06315 115 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 ZSCAN22P10073 491 aaPredicted RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 MSNP26038 577 aaKnown RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 NMIQ13287 307 aaPredicted RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 BLOC1S2Q6QNY1 142 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 LRSAM1Q6UWE0 723 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 RUFY3Q7L099 469 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 UBE3BQ7Z3V4 1068 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 ZCRB1Q8TBF4 217 aaKnown RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 KCNB2Q92953 911 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 TTC14Q96N46 770 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 CCDC8Q9H0W5 538 aaPredicted RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 BOLA2Q9H3K6 86 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 SNRKQ9NRH2 765 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 ZDHHC9Q9Y397 364 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 RBM8AQ9Y5S9 174 aaKnown RBP9.52□□□□□ -0.89
SMC4-212ENST00000470240 STRCP1A6NGW2 1772 aa9.52□□□□□ -0.89
SMC4-212ENST00000470240 ESPNB1AK53 854 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 CYP27B1O15528 508 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 SASH1O94885 1247 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 IL2RBP14784 551 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 ATP5JP18859 108 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 RABL6Q3YEC7 729 aaPredicted RBP9.51□□□□□ -0.89
SMC4-212ENST00000470240 HS1BP3Q53T59 392 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 TNNI3KQ59H18 835 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 CREB3L3Q68CJ9 461 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 GAS2L3Q86XJ1 694 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 SCUBE3Q8IX30 993 aa9.51□□□□□ -0.89
SMC4-212ENST00000470240 FAM184AQ8NB25 1140 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms