RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 FZD1Q9UP38 647 aa11.87□□□□□ -0.51
CCDC171-204ENST00000470191 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
CCDC171-204ENST00000470191 MYH3P11055 1940 aa11.86□□□□□ -0.51
CCDC171-204ENST00000470191 ZBTB22O15209 634 aa11.86□□□□□ -0.51
CCDC171-204ENST00000470191 SASH1O94885 1247 aa11.86□□□□□ -0.51
CCDC171-204ENST00000470191 NF2P35240 595 aa11.86□□□□□ -0.51
CCDC171-204ENST00000470191 GMLQ99445 158 aa11.86□□□□□ -0.51
CCDC171-204ENST00000470191 CHL1O00533 1208 aa11.85□□□□□ -0.51
CCDC171-204ENST00000470191 TM4SF4P48230 202 aa11.85□□□□□ -0.51
CCDC171-204ENST00000470191 PTPN12Q05209 780 aaKnown RBP11.85□□□□□ -0.51
CCDC171-204ENST00000470191 CCDC152Q4G0S7 254 aa11.85□□□□□ -0.51
CCDC171-204ENST00000470191 ANKRD18AQ8IVF6 992 aa11.85□□□□□ -0.51
CCDC171-204ENST00000470191 ZBTB38Q8NAP3 1195 aaPredicted RBP11.85□□□□□ -0.51
CCDC171-204ENST00000470191 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
CCDC171-204ENST00000470191 HYPKQ9NX55 129 aa11.85□□□□□ -0.51
CCDC171-204ENST00000470191 XDHP47989 1333 aa11.85□□□□□ -0.51
CCDC171-204ENST00000470191 POTEFA5A3E0 1075 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
CCDC171-204ENST00000470191 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 SREBF2Q12772 1141 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 HABP4Q5JVS0 413 aaKnown RBP11.84□□□□□ -0.51
CCDC171-204ENST00000470191 DUSP27Q5VZP5 1158 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 GCC1Q96CN9 775 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 PLSCR2Q9NRY7 297 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 TRIM17Q9Y577 477 aa11.84□□□□□ -0.51
CCDC171-204ENST00000470191 WNT10BO00744 389 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 PDE8AO60658 829 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 ATP2B4P23634 1241 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 FXR2P51116 673 aaKnown RBP eCLIP11.83□□□□□ -0.52
CCDC171-204ENST00000470191 ARMC9Q7Z3E5 817 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 OGFOD1Q8N543 542 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 ANGEL1Q9UNK9 670 aaKnown RBP11.83□□□□□ -0.52
CCDC171-204ENST00000470191 TRIM35Q9UPQ4 493 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 ZNF609O15014 1411 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 ECM29Q5VYK3 1845 aa11.83□□□□□ -0.52
CCDC171-204ENST00000470191 EVX2Q03828 476 aa11.82□□□□□ -0.52
CCDC171-204ENST00000470191 TRIM28Q13263 835 aaKnown RBP11.82□□□□□ -0.52
CCDC171-204ENST00000470191 PODNQ7Z5L7 613 aa11.82□□□□□ -0.52
CCDC171-204ENST00000470191 RBBP6Q7Z6E9 1792 aaKnown RBP11.82□□□□□ -0.52
CCDC171-204ENST00000470191 PCCAP05165 728 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-204ENST00000470191 HSP90B1P14625 803 aaKnown RBP11.81□□□□□ -0.52
CCDC171-204ENST00000470191 DACT2Q5SW24 774 aa11.81□□□□□ -0.52
CCDC171-204ENST00000470191 SPRYD7Q5W111 196 aa11.81□□□□□ -0.52
CCDC171-204ENST00000470191 KIAA0825Q8IV33 1275 aa11.81□□□□□ -0.52
CCDC171-204ENST00000470191 SLC10A4Q96EP9 437 aa11.81□□□□□ -0.52
CCDC171-204ENST00000470191 CWC25Q9NXE8 425 aaPredicted RBP11.81□□□□□ -0.52
CCDC171-204ENST00000470191 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 HOXB7P09629 217 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 CCT4P50991 539 aaKnown RBP11.8□□□□□ -0.52
CCDC171-204ENST00000470191 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 TXNRD3Q86VQ6 643 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 CD99L2Q8TCZ2 262 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 CLMNQ96JQ2 1002 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 MBIPQ9NS73 344 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 MINPP1Q9UNW1 487 aa11.8□□□□□ -0.52
CCDC171-204ENST00000470191 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
CCDC171-204ENST00000470191 EN2P19622 333 aaPredicted RBP11.79□□□□□ -0.52
CCDC171-204ENST00000470191 CTSWP56202 376 aa11.79□□□□□ -0.52
CCDC171-204ENST00000470191 NOM1Q5C9Z4 860 aaKnown RBP11.79□□□□□ -0.52
CCDC171-204ENST00000470191 LHX8Q68G74 356 aa11.79□□□□□ -0.52
CCDC171-204ENST00000470191 IFNL1Q8IU54 200 aa11.79□□□□□ -0.52
CCDC171-204ENST00000470191 APOBEC3FQ8IUX4 373 aaKnown RBP11.79□□□□□ -0.52
CCDC171-204ENST00000470191 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
CCDC171-204ENST00000470191 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
CCDC171-204ENST00000470191 LAMB1P07942 1786 aa11.79□□□□□ -0.52
CCDC171-204ENST00000470191 MANSC4A6NHS7 340 aaPredicted RBP11.78□□□□□ -0.52
CCDC171-204ENST00000470191 IGF2BP3O00425 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC171-204ENST00000470191 ALDH1A1P00352 501 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 KLRK1P26718 216 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 GTF2IP78347 998 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 WDR43Q15061 677 aaKnown RBP eCLIP11.78□□□□□ -0.52
CCDC171-204ENST00000470191 STRIP1Q5VSL9 837 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 GREM2Q9H772 168 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 PCDHAC2Q9Y5I4 1007 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 MYO3BQ8WXR4 1341 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 OTOFQ9HC10 1997 aa11.78□□□□□ -0.52
CCDC171-204ENST00000470191 CLRN2A0PK11 232 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 F8W031 263 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-204ENST00000470191 MYCP01106 439 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-204ENST00000470191 LDLRAD1Q5T700 205 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 TTLL11Q8NHH1 800 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 WNK4Q96J92 1243 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 METTL22Q9BUU2 404 aaPredicted RBP11.77□□□□□ -0.53
CCDC171-204ENST00000470191 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 COA1Q9GZY4 146 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 MAP3K2Q9Y2U5 619 aa11.77□□□□□ -0.53
CCDC171-204ENST00000470191 ZSWIM8A7E2V4 1837 aa11.76□□□□□ -0.53
CCDC171-204ENST00000470191 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
CCDC171-204ENST00000470191 DLGAP5Q15398 846 aa11.76□□□□□ -0.53
CCDC171-204ENST00000470191 INTS3Q68E01 1043 aaKnown RBP11.76□□□□□ -0.53
CCDC171-204ENST00000470191 ERO1AQ96HE7 468 aa11.76□□□□□ -0.53
CCDC171-204ENST00000470191 DEFB129Q9H1M3 183 aa11.76□□□□□ -0.53
CCDC171-204ENST00000470191 BSDC1Q9NW68 430 aaPredicted RBP11.76□□□□□ -0.53
CCDC171-204ENST00000470191 PTPN22Q9Y2R2 807 aa11.76□□□□□ -0.53
CCDC171-204ENST00000470191 A0A1B0GUL6 1792 aa11.76□□□□□ -0.53
CCDC171-204ENST00000470191 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
CCDC171-204ENST00000470191 IGHMBP2P38935 993 aaKnown RBP11.75□□□□□ -0.53
CCDC171-204ENST00000470191 KCNJ4P48050 445 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms