RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 FRS2Q8WU20 508 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 TAF4BQ92750 862 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 GOLGA1Q92805 767 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 KCNB2Q92953 911 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 DNAAF2Q9NVR5 837 aaKnown RBP6.05□□□□□ -1.44
COL3A1-205ENST00000470167 TMEM63CQ9P1W3 806 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 SLAIN2Q9P270 581 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 KLF15Q9UIH9 416 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 NOL7Q9UMY1 257 aaKnown RBP6.05□□□□□ -1.44
COL3A1-205ENST00000470167 PRDM2Q13029 1718 aa6.05□□□□□ -1.44
COL3A1-205ENST00000470167 PABPN1LA6NDY0 278 aaKnown RBP6.04□□□□□ -1.44
COL3A1-205ENST00000470167 F8VZ95 297 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 VAMP4O75379 141 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 GGCXP38435 758 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 ATP1A2P50993 1020 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 SESN3P58005 492 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 CBX1P83916 185 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 ICA1Q05084 483 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 FAM69CQ0P6D2 419 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 WASHC5Q12768 1159 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 PKN1Q16512 942 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 PTPROQ16827 1216 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 MUM1L1Q5H9M0 696 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 RNF20Q5VTR2 975 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 CCDC30Q5VVM6 783 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 AP1ARQ63HQ0 302 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 PPP1R18Q6NYC8 613 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 CDC37L1Q7L3B6 337 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 DPH6Q7L8W6 267 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 CCDC146Q8IYE0 955 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 DRAXINQ8NBI3 349 aaPredicted RBP6.04□□□□□ -1.44
COL3A1-205ENST00000470167 CCDC26Q8TAB7 109 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 NEUROD6Q96NK8 337 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 RPS6KC1Q96S38 1066 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 DUSP9Q99956 384 aaKnown RBP6.04□□□□□ -1.44
COL3A1-205ENST00000470167 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.04□□□□□ -1.44
COL3A1-205ENST00000470167 OGFRQ9NZT2 677 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 PPP1R1BQ9UD71 204 aaPredicted RBP6.04□□□□□ -1.44
COL3A1-205ENST00000470167 USP25Q9UHP3 1055 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 ZNF652Q9Y2D9 606 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 JRKLQ9Y4A0 524 aa6.04□□□□□ -1.44
COL3A1-205ENST00000470167 EIF4G1Q04637 1599 aaKnown RBP6.04□□□□□ -1.44
COL3A1-205ENST00000470167 SPAG9O60271 1321 aaKnown RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 hCG_2014768A0A024R1R8 64 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 C21orf2O43822 256 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 HIP1RO75146 1068 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 COL6A1P12109 1028 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 XBP1P17861 261 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 WNT7BP56706 349 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 ATP2B3Q16720 1220 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 TBC1D25Q3MII6 688 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 B4GALNT3Q6L9W6 998 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 PHLDB3Q6NSJ2 640 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 NOP9Q86U38 636 aaKnown RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 TXNDC2Q86VQ3 553 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 ARHGEF25Q86VW2 580 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 GAS2L2Q8NHY3 880 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 ZNF512BQ96KM6 892 aaPredicted RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 KCTD15Q96SI1 283 aaPredicted RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 CEP89Q96ST8 783 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 TRIM7Q9C029 511 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 UNC45AQ9H3U1 944 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 QPCTLQ9NXS2 382 aa6.03□□□□□ -1.44
COL3A1-205ENST00000470167 CDV3Q9UKY7 258 aaKnown RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 BARX2Q9UMQ3 279 aaPredicted RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 DIS3Q9Y2L1 958 aaKnown RBP6.03□□□□□ -1.44
COL3A1-205ENST00000470167 CHL1O00533 1208 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 DKK1O94907 266 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 BAG4O95429 457 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 MSL3P1P0C860 447 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 HARSP12081 509 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 CD53P19397 219 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 VARSP26640 1264 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 MCM5P33992 734 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 RPS6KA3P51812 740 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 ZC3H6P61129 1189 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 EIF2B5Q13144 721 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 KCTD2Q14681 263 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 FXNQ16595 210 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 INTS6LQ5JSJ4 861 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 EGFLAMQ63HQ2 1017 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 MSL1Q68DK7 614 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 CC2D1AQ6P1N0 951 aaPredicted RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 VASH1Q7L8A9 365 aaPredicted RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 LCA5Q86VQ0 697 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 NT5DC4Q86YG4 428 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 SEPT12Q8IYM1 358 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 SIX5Q8N196 739 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 NBPF15Q8N660 670 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 EHBP1Q8NDI1 1231 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 TPCN2Q8NHX9 752 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 CLP1Q92989 425 aaKnown RBP6.02□□□□□ -1.45
COL3A1-205ENST00000470167 PLEKHG4BQ96PX9 1271 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 SH3GL3Q99963 347 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 RBSNQ9H1K0 784 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 GINM1Q9NU53 330 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 ITM2BQ9Y287 266 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 TMEM98Q9Y2Y6 226 aa6.02□□□□□ -1.45
COL3A1-205ENST00000470167 KDRP35968 1356 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms