RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 HHIPL1Q96JK4 782 aa17.17■□□□□ 0.34
LINC00173-201ENST00000470091 GREM2Q9H772 168 aa17.17■□□□□ 0.34
LINC00173-201ENST00000470091 XDHP47989 1333 aa17.17■□□□□ 0.34
LINC00173-201ENST00000470091 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
LINC00173-201ENST00000470091 ZKSCAN2Q63HK3 967 aa17.16■□□□□ 0.34
LINC00173-201ENST00000470091 RSBN1LQ6PCB5 846 aaPredicted RBP17.16■□□□□ 0.34
LINC00173-201ENST00000470091 C2orf69Q8N8R5 385 aa17.16■□□□□ 0.34
LINC00173-201ENST00000470091 PANK1Q8TE04 598 aa17.16■□□□□ 0.34
LINC00173-201ENST00000470091 ABHD8Q96I13 439 aa17.16■□□□□ 0.34
LINC00173-201ENST00000470091 CDC5LQ99459 802 aaKnown RBP17.16■□□□□ 0.34
LINC00173-201ENST00000470091 GBA2Q9HCG7 927 aaPredicted RBP17.16■□□□□ 0.34
LINC00173-201ENST00000470091 NOB1Q9ULX3 412 aaKnown RBP17.16■□□□□ 0.34
LINC00173-201ENST00000470091 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
LINC00173-201ENST00000470091 NEURL1BA8MQ27 555 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 BRPF1P55201 1214 aaPredicted RBP17.15■□□□□ 0.34
LINC00173-201ENST00000470091 SCARF1Q14162 830 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 SULF1Q8IWU6 871 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 PPP4R2Q9NY27 417 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 GGA3Q9NZ52 723 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 MINPP1Q9UNW1 487 aa17.15■□□□□ 0.34
LINC00173-201ENST00000470091 PDE3AQ14432 1141 aa17.14■□□□□ 0.33
LINC00173-201ENST00000470091 FBXW7Q969H0 707 aa17.14■□□□□ 0.33
LINC00173-201ENST00000470091 USP17L3A6NCW0 530 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 USP17L4A6NCW7 530 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 H7C1W4 665 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 RLBP1P12271 317 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 TRIM27P14373 513 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
LINC00173-201ENST00000470091 NOGQ13253 232 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 ANGEL2Q5VTE6 544 aaKnown RBP17.13■□□□□ 0.33
LINC00173-201ENST00000470091 RGMBQ6NW40 437 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 ATF7IPQ6VMQ6 1270 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 USP17L1Q7RTZ2 530 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 CLUAP1Q96AJ1 413 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 MXD3Q9BW11 206 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 BSDC1Q9NW68 430 aaPredicted RBP17.13■□□□□ 0.33
LINC00173-201ENST00000470091 SCAF8Q9UPN6 1271 aaKnown RBP17.13■□□□□ 0.33
LINC00173-201ENST00000470091 SCN9AQ15858 1988 aa17.13■□□□□ 0.33
LINC00173-201ENST00000470091 CCDC85CA6NKD9 419 aa17.12■□□□□ 0.33
LINC00173-201ENST00000470091 CA12O43570 354 aa17.12■□□□□ 0.33
LINC00173-201ENST00000470091 USP17L8P0C7I0 530 aa17.12■□□□□ 0.33
LINC00173-201ENST00000470091 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
LINC00173-201ENST00000470091 IPO8O15397 1037 aaKnown RBP17.11■□□□□ 0.33
LINC00173-201ENST00000470091 CCT4P50991 539 aaKnown RBP17.11■□□□□ 0.33
LINC00173-201ENST00000470091 FLIIQ13045 1269 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
LINC00173-201ENST00000470091 GCKRQ14397 625 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 PODNQ7Z5L7 613 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 FTSJ3Q8IY81 847 aaKnown RBP17.11■□□□□ 0.33
LINC00173-201ENST00000470091 DZIP1LQ8IYY4 767 aaKnown RBP17.11■□□□□ 0.33
LINC00173-201ENST00000470091 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 GMLQ99445 158 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 MYOZ2Q9NPC6 264 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 COG6Q9Y2V7 657 aa17.11■□□□□ 0.33
LINC00173-201ENST00000470091 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
LINC00173-201ENST00000470091 KIF23Q02241 960 aaPredicted RBP17.1■□□□□ 0.33
LINC00173-201ENST00000470091 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
LINC00173-201ENST00000470091 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
LINC00173-201ENST00000470091 FAM155AB1AL88 458 aaPredicted RBP17.09■□□□□ 0.33
LINC00173-201ENST00000470091 MS4A1P11836 297 aa17.09■□□□□ 0.33
LINC00173-201ENST00000470091 ITGA6P23229 1130 aa17.09■□□□□ 0.33
LINC00173-201ENST00000470091 PRAMEF18Q5VWM3 479 aa17.09■□□□□ 0.33
LINC00173-201ENST00000470091 B4GALNT3Q6L9W6 998 aa17.09■□□□□ 0.33
LINC00173-201ENST00000470091 DNAAF4Q8WXU2 420 aa17.09■□□□□ 0.33
LINC00173-201ENST00000470091 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
LINC00173-201ENST00000470091 CASP8AP2Q9UKL3 1982 aa17.08■□□□□ 0.33
LINC00173-201ENST00000470091 THSD7BQ9C0I4 1608 aa17.08■□□□□ 0.32
LINC00173-201ENST00000470091 FAM161AQ3B820 660 aa17.08■□□□□ 0.32
LINC00173-201ENST00000470091 NBPF9Q3BBW0 867 aa17.08■□□□□ 0.32
LINC00173-201ENST00000470091 DACT2Q5SW24 774 aa17.07■□□□□ 0.32
LINC00173-201ENST00000470091 MOB2Q70IA6 237 aa17.07■□□□□ 0.32
LINC00173-201ENST00000470091 OGFOD1Q8N543 542 aa17.07■□□□□ 0.32
LINC00173-201ENST00000470091 ARHGAP45Q92619 1136 aa17.07■□□□□ 0.32
LINC00173-201ENST00000470091 API5Q9BZZ5 524 aaKnown RBP17.07■□□□□ 0.32
LINC00173-201ENST00000470091 MCOLN1Q9GZU1 580 aa17.07■□□□□ 0.32
LINC00173-201ENST00000470091 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
LINC00173-201ENST00000470091 MED23Q9ULK4 1368 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 ZNF804BA4D1E1 1349 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 F6X3S4 739 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 SNAP23O00161 211 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 TRPA1O75762 1119 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 KLRK1P26718 216 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 KCNJ4P48050 445 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 CASP7P55210 303 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 DGKZQ13574 1117 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 MVPQ14764 893 aaKnown RBP17.06■□□□□ 0.32
LINC00173-201ENST00000470091 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 HELBQ8NG08 1087 aaPredicted RBP17.06■□□□□ 0.32
LINC00173-201ENST00000470091 LINS1Q8NG48 757 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 ANKRD2Q9GZV1 360 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
LINC00173-201ENST00000470091 PTPRCP08575 1304 aa17.05■□□□□ 0.32
LINC00173-201ENST00000470091 UBE2Q2LH0YL09 131 aa17.05■□□□□ 0.32
LINC00173-201ENST00000470091 CSF1RP07333 972 aa17.05■□□□□ 0.32
LINC00173-201ENST00000470091 ITPRIPQ8IWB1 547 aa17.05■□□□□ 0.32
LINC00173-201ENST00000470091 CSRNP1Q96S65 589 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms