RNA–Protein interactions for RNA: ENST00000470056.5

GAPVD1-215, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 8,923 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-215ENST00000470056 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 MCTP1Q6DN14 999 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 KCNB2Q92953 911 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 ZNF594Q96JF6 807 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 RTCBQ9Y3I0 505 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 BAG4O95429 457 aaKnown RBP8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 AK2P54819 239 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 PAPPAQ13219 1627 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 MED23Q9ULK4 1368 aa8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 ALDH8A1Q9H2A2 487 aaPredicted RBP8.21□□□□□ -1.1
GAPVD1-215ENST00000470056 A0A0D9SFI3 127 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 ANKRD18AQ8IVF6 992 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 CCNL1Q9UK58 526 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 COL16A1Q07092 1604 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 TIMM10P62072 90 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 TSGA10IPQ3SY00 556 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 CD2BP2O95400 341 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 KLHL40Q2TBA0 621 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 CPLX2Q6PUV4 134 aaKnown RBP8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 PDE8BO95263 885 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 HLFQ16534 295 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 NECTIN1Q15223 517 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 ZMYM1Q5SVZ6 1142 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 APPBP2Q92624 585 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 SETDB2Q96T68 719 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 FAM177BA6PVY3 158 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 TAF5LO75529 589 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 CAVIN4Q5BKX8 364 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 TPTE2Q6XPS3 522 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 FNBP4Q8N3X1 1017 aaPredicted RBP8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 RPS6KB1P23443 525 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 AIDAQ96BJ3 306 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 GREM2Q9H772 168 aa8.2□□□□□ -1.1
GAPVD1-215ENST00000470056 MNS1Q8NEH6 495 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 ANKRD2Q9GZV1 360 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 PTH1RQ03431 593 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 NBPF5PQ86XG9 351 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 UBR2Q8IWV8 1755 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 GNAT2P19087 354 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 TMED8Q6PL24 325 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 NLRP3Q96P20 1036 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 PODXL2Q9NZ53 605 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 RTL9Q8NET4 1388 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 CAMTA2O94983 1202 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 H3BQV1 296 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 APPP05067 770 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 IFFO2Q5TF58 517 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 CERKQ8TCT0 537 aa8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
GAPVD1-215ENST00000470056 IDH1O75874 414 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 PUS3Q9BZE2 481 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 RPS6KA4O75676 772 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 UBE3CQ15386 1083 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 ARFGEF2Q9Y6D5 1785 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 STX6O43752 255 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 USPL1Q5W0Q7 1092 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 TMX4Q9H1E5 349 aaPredicted RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 BRD1O95696 1058 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 DHX32Q7L7V1 743 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 GNPATO15228 680 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 IGSF3O75054 1194 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 RFC4P35249 363 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 INTS5Q6P9B9 1019 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 CCDC83Q8IWF9 413 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 RASEFQ8IZ41 740 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 GRPEL1Q9HAV7 217 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 ADRA2BP18089 450 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 SART3Q15020 963 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 ZGPATQ8N5A5 531 aaKnown RBP8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 TTC14Q96N46 770 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 FAM107BQ9H098 131 aa8.18□□□□□ -1.1
GAPVD1-215ENST00000470056 SYNE3Q6ZMZ3 975 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 KLHL34Q8N239 644 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 RIPOR2Q9Y4F9 1068 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 NWD2Q9ULI1 1742 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 VPS37CA5D8V6 355 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 ZSCAN22P10073 491 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 LARP1BQ659C4 914 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 NARFQ9UHQ1 456 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 SUSD4Q5VX71 490 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 LEKR1Q6ZMV7 388 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 CPLX1O14810 134 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 CDKL5O76039 1030 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 TRAPPC3LQ5T215 181 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 NCOA7Q8NI08 942 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 SLC4A9Q96Q91 983 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 ZNF213O14771 459 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 LLPHQ9BRT6 129 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 PRPF40AO75400 957 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 HCLS1P14317 486 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 SLC9C2Q5TAH2 1124 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 SEMA3EO15041 775 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 GJB2P29033 226 aa8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 GJD4Q96KN9 370 aaPredicted RBP8.17□□□□□ -1.1
GAPVD1-215ENST00000470056 GLI3P10071 1580 aa8.16□□□□□ -1.1
GAPVD1-215ENST00000470056 CCDC73Q6ZRK6 1079 aa8.16□□□□□ -1.1
GAPVD1-215ENST00000470056 RNF41Q9H4P4 317 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-215ENST00000470056 ERLIN1O75477 346 aa8.16□□□□□ -1.1
GAPVD1-215ENST00000470056 CAVIN2O95810 425 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms