RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 RPS12P25398 132 aaKnown RBP22.05■■□□□ 1.12
MRPL28-208ENST00000469744 RBM26Q5T8P6 1007 aaKnown RBP22.05■■□□□ 1.12
MRPL28-208ENST00000469744 HELBQ8NG08 1087 aaPredicted RBP22.05■■□□□ 1.12
MRPL28-208ENST00000469744 GLIS2Q9BZE0 524 aaPredicted RBP22.05■■□□□ 1.12
MRPL28-208ENST00000469744 ZNF804BA4D1E1 1349 aa22.04■■□□□ 1.12
MRPL28-208ENST00000469744 SNAP23O00161 211 aa22.04■■□□□ 1.12
MRPL28-208ENST00000469744 CNTNAP1P78357 1384 aa22.04■■□□□ 1.12
MRPL28-208ENST00000469744 KAZALD1Q96I82 304 aa22.04■■□□□ 1.12
MRPL28-208ENST00000469744 ANKRD2Q9GZV1 360 aa22.04■■□□□ 1.12
MRPL28-208ENST00000469744 ZNF646O15015 1829 aaPredicted RBP22.04■■□□□ 1.12
MRPL28-208ENST00000469744 TAF5LO75529 589 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 BCAR3O75815 825 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
MRPL28-208ENST00000469744 AAMPQ13685 434 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 CCDC57Q2TAC2 916 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 ALDH1L2Q3SY69 923 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 LEMD3Q9Y2U8 911 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 POLR2AP24928 1970 aaKnown RBP22.03■■□□□ 1.12
MRPL28-208ENST00000469744 KCNJ4P48050 445 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 TAF7LQ5H9L4 462 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 RSBN1LQ6PCB5 846 aaPredicted RBP22.03■■□□□ 1.12
MRPL28-208ENST00000469744 PGAP2Q9UHJ9 254 aa22.03■■□□□ 1.12
MRPL28-208ENST00000469744 ABT1Q9ULW3 272 aaKnown RBP22.03■■□□□ 1.12
MRPL28-208ENST00000469744 UTYO14607 1347 aa22.02■■□□□ 1.12
MRPL28-208ENST00000469744 PODNQ7Z5L7 613 aa22.02■■□□□ 1.12
MRPL28-208ENST00000469744 FBXW7Q969H0 707 aa22.02■■□□□ 1.12
MRPL28-208ENST00000469744 MXD3Q9BW11 206 aa22.02■■□□□ 1.12
MRPL28-208ENST00000469744 USP17L3A6NCW0 530 aa22.01■■□□□ 1.11
MRPL28-208ENST00000469744 USP17L4A6NCW7 530 aa22.01■■□□□ 1.11
MRPL28-208ENST00000469744 CST9Q5W186 159 aa22.01■■□□□ 1.11
MRPL28-208ENST00000469744 DLK2Q6UY11 383 aa22.01■■□□□ 1.11
MRPL28-208ENST00000469744 USP17L1Q7RTZ2 530 aa22.01■■□□□ 1.11
MRPL28-208ENST00000469744 ZC3H15Q8WU90 426 aaKnown RBP22.01■■□□□ 1.11
MRPL28-208ENST00000469744 BICC1Q9H694 974 aaKnown RBP22.01■■□□□ 1.11
MRPL28-208ENST00000469744 VEGFBP49765 207 aa22■■□□□ 1.11
MRPL28-208ENST00000469744 KIF4BQ2VIQ3 1234 aa22■■□□□ 1.11
MRPL28-208ENST00000469744 LDHAL6AQ6ZMR3 332 aa22■■□□□ 1.11
MRPL28-208ENST00000469744 ASTN2O75129 1339 aaPredicted RBP21.99■■□□□ 1.11
MRPL28-208ENST00000469744 AGBL3Q8NEM8 1001 aa21.99■■□□□ 1.11
MRPL28-208ENST00000469744 GMLQ99445 158 aa21.99■■□□□ 1.11
MRPL28-208ENST00000469744 COA1Q9GZY4 146 aa21.99■■□□□ 1.11
MRPL28-208ENST00000469744 ZNF408Q9H9D4 720 aa21.99■■□□□ 1.11
MRPL28-208ENST00000469744 CNNM1Q9NRU3 951 aa21.99■■□□□ 1.11
MRPL28-208ENST00000469744 CELF2O95319 508 aaKnown RBP21.98■■□□□ 1.11
MRPL28-208ENST00000469744 CENPQQ7L2Z9 268 aaPredicted RBP21.98■■□□□ 1.11
MRPL28-208ENST00000469744 USP48Q86UV5 1035 aa21.98■■□□□ 1.11
MRPL28-208ENST00000469744 PUS3Q9BZE2 481 aaKnown RBP21.98■■□□□ 1.11
MRPL28-208ENST00000469744 NOB1Q9ULX3 412 aaKnown RBP21.98■■□□□ 1.11
MRPL28-208ENST00000469744 ZNF609O15014 1411 aa21.98■■□□□ 1.11
MRPL28-208ENST00000469744 HSPA1AP0DMV8 641 aaKnown RBP21.97■■□□□ 1.11
MRPL28-208ENST00000469744 HSPA1BP0DMV9 641 aaKnown RBP21.97■■□□□ 1.11
MRPL28-208ENST00000469744 MS4A1P11836 297 aa21.97■■□□□ 1.11
MRPL28-208ENST00000469744 DACT2Q5SW24 774 aa21.97■■□□□ 1.11
MRPL28-208ENST00000469744 ANKRD44Q8N8A2 993 aa21.97■■□□□ 1.11
MRPL28-208ENST00000469744 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
MRPL28-208ENST00000469744 IRS2Q9Y4H2 1338 aa21.97■■□□□ 1.11
MRPL28-208ENST00000469744 RASSF10A6NK89 507 aa21.96■■□□□ 1.11
MRPL28-208ENST00000469744 ZNF280AP59817 542 aaPredicted RBP21.96■■□□□ 1.11
MRPL28-208ENST00000469744 DEFB115Q30KQ5 88 aa21.96■■□□□ 1.11
MRPL28-208ENST00000469744 CDC37L1Q7L3B6 337 aa21.96■■□□□ 1.11
MRPL28-208ENST00000469744 USP17L8P0C7I0 530 aa21.96■■□□□ 1.11
MRPL28-208ENST00000469744 KRT26Q7Z3Y9 468 aa21.96■■□□□ 1.11
MRPL28-208ENST00000469744 GGA3Q9NZ52 723 aa21.96■■□□□ 1.11
MRPL28-208ENST00000469744 ADM5C9JUS6 153 aa21.95■■□□□ 1.1
MRPL28-208ENST00000469744 RABL6Q3YEC7 729 aaPredicted RBP21.95■■□□□ 1.1
MRPL28-208ENST00000469744 PAXIP1Q6ZW49 1069 aaPredicted RBP21.95■■□□□ 1.1
MRPL28-208ENST00000469744 GTF2IP78347 998 aa21.94■■□□□ 1.1
MRPL28-208ENST00000469744 GRM1Q13255 1194 aa21.94■■□□□ 1.1
MRPL28-208ENST00000469744 STRIP1Q5VSL9 837 aa21.94■■□□□ 1.1
MRPL28-208ENST00000469744 TTLL5Q6EMB2 1281 aa21.94■■□□□ 1.1
MRPL28-208ENST00000469744 DCPSQ96C86 337 aaKnown RBP21.94■■□□□ 1.1
MRPL28-208ENST00000469744 CD209Q9NNX6 404 aa21.94■■□□□ 1.1
MRPL28-208ENST00000469744 MYOZ2Q9NPC6 264 aa21.94■■□□□ 1.1
MRPL28-208ENST00000469744 SCARF1Q14162 830 aa21.93■■□□□ 1.1
MRPL28-208ENST00000469744 KLHDC4Q8TBB5 520 aa21.93■■□□□ 1.1
MRPL28-208ENST00000469744 TLL2Q9Y6L7 1015 aa21.93■■□□□ 1.1
MRPL28-208ENST00000469744 LRRC24Q50LG9 513 aa21.91■■□□□ 1.1
MRPL28-208ENST00000469744 ANGEL2Q5VTE6 544 aaKnown RBP21.91■■□□□ 1.1
MRPL28-208ENST00000469744 CYP4F22Q6NT55 531 aa21.91■■□□□ 1.1
MRPL28-208ENST00000469744 C15orf52Q6ZUT6 534 aaKnown RBP21.91■■□□□ 1.1
MRPL28-208ENST00000469744 SCAF8Q9UPN6 1271 aaKnown RBP21.91■■□□□ 1.1
MRPL28-208ENST00000469744 JAG2Q9Y219 1238 aa21.91■■□□□ 1.1
MRPL28-208ENST00000469744 WDR33Q9C0J8 1336 aaKnown RBP21.91■■□□□ 1.1
MRPL28-208ENST00000469744 BRPF1P55201 1214 aaPredicted RBP21.9■■□□□ 1.1
MRPL28-208ENST00000469744 ZNF804AQ7Z570 1209 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 SAPCD2Q86UD0 394 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 KIAA0825Q8IV33 1275 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 CAPNS2Q96L46 248 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 API5Q9BZZ5 524 aaKnown RBP21.9■■□□□ 1.1
MRPL28-208ENST00000469744 RIPOR2Q9Y4F9 1068 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 MYO3BQ8WXR4 1341 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 NBPF9Q3BBW0 867 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 SULF1Q8IWU6 871 aa21.9■■□□□ 1.1
MRPL28-208ENST00000469744 OGFOD1Q8N543 542 aa21.89■■□□□ 1.09
MRPL28-208ENST00000469744 KIF16BQ96L93 1317 aa21.88■■□□□ 1.09
MRPL28-208ENST00000469744 SASH1O94885 1247 aa21.88■■□□□ 1.09
MRPL28-208ENST00000469744 UBTFL1P0CB47 393 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-208ENST00000469744 GYG1P46976 350 aa21.88■■□□□ 1.09
MRPL28-208ENST00000469744 COL13A1Q5TAT6 717 aaPredicted RBP21.88■■□□□ 1.09
MRPL28-208ENST00000469744 ZKSCAN2Q63HK3 967 aa21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms