RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 CCDC102BQ68D86 513 aa15.51■□□□□ 0.07
TRAF4-208ENST00000469529 WWC3Q9ULE0 1092 aa15.51■□□□□ 0.07
TRAF4-208ENST00000469529 PDS5AQ29RF7 1337 aaKnown RBP15.5■□□□□ 0.07
TRAF4-208ENST00000469529 HIP1O00291 1037 aa15.5■□□□□ 0.07
TRAF4-208ENST00000469529 SEMA3EO15041 775 aa15.5■□□□□ 0.07
TRAF4-208ENST00000469529 EPB41L2O43491 1005 aaKnown RBP15.5■□□□□ 0.07
TRAF4-208ENST00000469529 TBC1D9Q6ZT07 1266 aa15.5■□□□□ 0.07
TRAF4-208ENST00000469529 C7orf43Q8WVR3 580 aa15.5■□□□□ 0.07
TRAF4-208ENST00000469529 FAM84BQ96KN1 310 aaPredicted RBP15.5■□□□□ 0.07
TRAF4-208ENST00000469529 BOLA2Q9H3K6 86 aa15.5■□□□□ 0.07
TRAF4-208ENST00000469529 KIF13BQ9NQT8 1826 aa15.5■□□□□ 0.07
TRAF4-208ENST00000469529 RFX7Q2KHR2 1363 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 COL4A1P02462 1669 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 TRIM6-TRIM34B2RNG4 842 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 PPEF1O14829 653 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-208ENST00000469529 CHMLP26374 656 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 CAVIN4Q5BKX8 364 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 TTC39AQ5SRH9 613 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 CASC1Q6TDU7 716 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 ZNF784Q8NCA9 323 aaPredicted RBP15.49■□□□□ 0.07
TRAF4-208ENST00000469529 BCL11AQ9H165 835 aa15.49■□□□□ 0.07
TRAF4-208ENST00000469529 GNL3LQ9NVN8 582 aaKnown RBP15.49■□□□□ 0.07
TRAF4-208ENST00000469529 KCNA3P22001 575 aa15.48■□□□□ 0.07
TRAF4-208ENST00000469529 GPSM2P81274 684 aa15.48■□□□□ 0.07
TRAF4-208ENST00000469529 KBTBD3Q8NAB2 608 aa15.48■□□□□ 0.07
TRAF4-208ENST00000469529 SNRKQ9NRH2 765 aa15.48■□□□□ 0.07
TRAF4-208ENST00000469529 ANKIB1Q9P2G1 1089 aa15.48■□□□□ 0.07
TRAF4-208ENST00000469529 A0A0G2JLW4 131 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 SNAP23O00161 211 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 PHKA1P46020 1223 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 TTF1Q15361 905 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-208ENST00000469529 LRRFIP1Q32MZ4 808 aaKnown RBP15.47■□□□□ 0.07
TRAF4-208ENST00000469529 TMED8Q6PL24 325 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-208ENST00000469529 RILPL2Q969X0 211 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 RTFDC1Q9BY42 306 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-208ENST00000469529 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
TRAF4-208ENST00000469529 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 PAG1Q9NWQ8 432 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 GGA1Q9UJY5 639 aa15.47■□□□□ 0.07
TRAF4-208ENST00000469529 NSFL1CQ9UNZ2 370 aaKnown RBP15.47■□□□□ 0.07
TRAF4-208ENST00000469529 DPEP1P16444 411 aa15.46■□□□□ 0.07
TRAF4-208ENST00000469529 HIBADHP31937 336 aaKnown RBP15.46■□□□□ 0.07
TRAF4-208ENST00000469529 MCAMP43121 646 aa15.46■□□□□ 0.07
TRAF4-208ENST00000469529 KCNJ4P48050 445 aa15.46■□□□□ 0.07
TRAF4-208ENST00000469529 BCAMP50895 628 aa15.46■□□□□ 0.07
TRAF4-208ENST00000469529 TTLL6Q8N841 843 aa15.46■□□□□ 0.07
TRAF4-208ENST00000469529 TBC1D16Q8TBP0 767 aa15.46■□□□□ 0.07
TRAF4-208ENST00000469529 ZNF622Q969S3 477 aaKnown RBP eCLIP15.46■□□□□ 0.07
TRAF4-208ENST00000469529 ANKRD31Q8N7Z5 1873 aa15.46■□□□□ 0.06
TRAF4-208ENST00000469529 KIAA1551Q9HCM1 1747 aa15.46■□□□□ 0.06
TRAF4-208ENST00000469529 WTIPA6NIX2 430 aaPredicted RBP15.45■□□□□ 0.06
TRAF4-208ENST00000469529 CHRNA5P30532 468 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 PRPF40BQ6NWY9 871 aaKnown RBP15.45■□□□□ 0.06
TRAF4-208ENST00000469529 MPNDQ8N594 471 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 SPATA5Q8NB90 893 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 TDRD7Q8NHU6 1098 aaKnown RBP15.45■□□□□ 0.06
TRAF4-208ENST00000469529 RUFY2Q8WXA3 655 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 HMG20BQ9P0W2 317 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 POLLQ9UGP5 575 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 DENND2AQ9ULE3 1009 aa15.45■□□□□ 0.06
TRAF4-208ENST00000469529 SEC24BO95487 1268 aa15.44■□□□□ 0.06
TRAF4-208ENST00000469529 ZFYP08048 801 aaPredicted RBP15.44■□□□□ 0.06
TRAF4-208ENST00000469529 SCARF1Q14162 830 aa15.44■□□□□ 0.06
TRAF4-208ENST00000469529 ESYT1Q9BSJ8 1104 aa15.44■□□□□ 0.06
TRAF4-208ENST00000469529 VPS33BQ9H267 617 aa15.44■□□□□ 0.06
TRAF4-208ENST00000469529 SGSM2O43147 1006 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 CYP2E1P05181 493 aaPredicted RBP15.43■□□□□ 0.06
TRAF4-208ENST00000469529 IL1R1P14778 569 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 ZAP70P43403 619 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 GYG1P46976 350 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 RASGRF1Q13972 1273 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 SOGA3Q5TF21 947 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 DNAJC2Q99543 621 aaKnown RBP15.43■□□□□ 0.06
TRAF4-208ENST00000469529 PIM2Q9P1W9 311 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 BCS1LQ9Y276 419 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 MED23Q9ULK4 1368 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 RAD50Q92878 1312 aa15.43■□□□□ 0.06
TRAF4-208ENST00000469529 GOLIM4O00461 696 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 REC8O95072 547 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 MAP4K4O95819 1239 aaPredicted RBP15.42■□□□□ 0.06
TRAF4-208ENST00000469529 FKBP4Q02790 459 aaKnown RBP eCLIP15.42■□□□□ 0.06
TRAF4-208ENST00000469529 ZSCAN25Q6NSZ9 544 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 TXNRD3Q86VQ6 643 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 VPS37DQ86XT2 251 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 RTKN2Q8IZC4 609 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 UPF2Q9HAU5 1272 aaKnown RBP15.42■□□□□ 0.06
TRAF4-208ENST00000469529 HELLSQ9NRZ9 838 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 SALL1Q9NSC2 1324 aa15.42■□□□□ 0.06
TRAF4-208ENST00000469529 RNF113AO15541 343 aaKnown RBP15.41■□□□□ 0.06
TRAF4-208ENST00000469529 UFL1O94874 794 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 UBE3CQ15386 1083 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 DPP8Q6V1X1 898 aaPredicted RBP15.41■□□□□ 0.06
TRAF4-208ENST00000469529 SUPT20HQ8NEM7 779 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 EYA3Q99504 573 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 FSD1Q9BTV5 496 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 USP26Q9BXU7 913 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.41■□□□□ 0.06
TRAF4-208ENST00000469529 COA1Q9GZY4 146 aa15.41■□□□□ 0.06
TRAF4-208ENST00000469529 ANTXR1Q9H6X2 564 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms