RNA–Protein interactions for RNA: ENST00000468894.1

XRN1-207, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-207ENST00000468894 NPHS2Q9NP85 383 aa9.76□□□□□ -0.85
XRN1-207ENST00000468894 FAM229AH3BQW9 127 aa9.75□□□□□ -0.85
XRN1-207ENST00000468894 RASSF7Q02833 373 aa9.75□□□□□ -0.85
XRN1-207ENST00000468894 ENOX2Q16206 610 aaKnown RBP9.75□□□□□ -0.85
XRN1-207ENST00000468894 WFDC8Q8IUA0 241 aa9.75□□□□□ -0.85
XRN1-207ENST00000468894 CCDC74AQ96AQ1 378 aa9.75□□□□□ -0.85
XRN1-207ENST00000468894 LACRTQ9GZZ8 138 aa9.75□□□□□ -0.85
XRN1-207ENST00000468894 PNMA6FA0A0J9YX94 578 aa9.74□□□□□ -0.85
XRN1-207ENST00000468894 A0A1W2PP55 124 aa9.74□□□□□ -0.85
XRN1-207ENST00000468894 PLCB3Q01970 1234 aa9.74□□□□□ -0.85
XRN1-207ENST00000468894 CCDC27Q2M243 656 aa9.74□□□□□ -0.85
XRN1-207ENST00000468894 TRAPPC3LQ5T215 181 aa9.74□□□□□ -0.85
XRN1-207ENST00000468894 DMRTC2Q8IXT2 367 aaPredicted RBP9.74□□□□□ -0.85
XRN1-207ENST00000468894 TMEM102Q8N9M5 508 aaPredicted RBP9.74□□□□□ -0.85
XRN1-207ENST00000468894 A0A0A0MRY4 1105 aa9.73□□□□□ -0.85
XRN1-207ENST00000468894 ANKRD33BA6NCL7 494 aa9.73□□□□□ -0.85
XRN1-207ENST00000468894 SPDYE3A6NKU9 549 aa9.73□□□□□ -0.85
XRN1-207ENST00000468894 PDE2AO00408 941 aaPredicted RBP9.73□□□□□ -0.85
XRN1-207ENST00000468894 IL22RA1Q8N6P7 574 aa9.73□□□□□ -0.85
XRN1-207ENST00000468894 DCAF5Q96JK2 942 aa9.73□□□□□ -0.85
XRN1-207ENST00000468894 BHLHE41Q9C0J9 482 aaPredicted RBP9.73□□□□□ -0.85
XRN1-207ENST00000468894 P4HBP07237 508 aaKnown RBP9.72□□□□□ -0.85
XRN1-207ENST00000468894 MAPK8P45983 427 aa9.72□□□□□ -0.85
XRN1-207ENST00000468894 NXPE3Q969Y0 559 aa9.72□□□□□ -0.85
XRN1-207ENST00000468894 SETDB2Q96T68 719 aa9.72□□□□□ -0.85
XRN1-207ENST00000468894 PTPRAP18433 802 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 EPHA1P21709 976 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.86
XRN1-207ENST00000468894 KIAA0319Q5VV43 1072 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 PI16Q6UXB8 463 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 ALYREFQ86V81 257 aaKnown RBP9.71□□□□□ -0.86
XRN1-207ENST00000468894 NPAS4Q8IUM7 802 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 FMR1NBQ8N0W7 255 aaPredicted RBP9.71□□□□□ -0.86
XRN1-207ENST00000468894 CACTIN-AS1Q8N1I8 211 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 EPS8L3Q8TE67 593 aaKnown RBP9.71□□□□□ -0.86
XRN1-207ENST00000468894 ADAM19Q9H013 955 aa9.71□□□□□ -0.86
XRN1-207ENST00000468894 METTL12A8MUP2 240 aa9.7□□□□□ -0.86
XRN1-207ENST00000468894 SPATA31C1P0DKV0 1188 aa9.7□□□□□ -0.86
XRN1-207ENST00000468894 CDC27P30260 824 aa9.7□□□□□ -0.86
XRN1-207ENST00000468894 CCNJLQ8IV13 435 aa9.7□□□□□ -0.86
XRN1-207ENST00000468894 TCF12Q99081 682 aa9.7□□□□□ -0.86
XRN1-207ENST00000468894 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
XRN1-207ENST00000468894 SOX13Q9UN79 622 aa9.7□□□□□ -0.86
XRN1-207ENST00000468894 KRBA1A5PL33 1030 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 DEAF1O75398 565 aaPredicted RBP9.69□□□□□ -0.86
XRN1-207ENST00000468894 GDF11O95390 407 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 RAC1P63000 192 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 PRRT3Q5FWE3 981 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 TXNDC11Q6PKC3 985 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 DTWD1Q8N5C7 304 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 LIN7BQ9HAP6 207 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 PPME1Q9Y570 386 aa9.69□□□□□ -0.86
XRN1-207ENST00000468894 TRIM28Q13263 835 aaKnown RBP9.68□□□□□ -0.86
XRN1-207ENST00000468894 EHD4Q9H223 541 aa9.68□□□□□ -0.86
XRN1-207ENST00000468894 WWC3Q9ULE0 1092 aa9.68□□□□□ -0.86
XRN1-207ENST00000468894 SETDB1Q15047 1291 aa9.67□□□□□ -0.86
XRN1-207ENST00000468894 TMCO4Q5TGY1 634 aa9.67□□□□□ -0.86
XRN1-207ENST00000468894 TMEM151AQ8N4L1 468 aa9.67□□□□□ -0.86
XRN1-207ENST00000468894 ASAP3Q8TDY4 903 aa9.67□□□□□ -0.86
XRN1-207ENST00000468894 MUC3BQ9H195 1237 aa9.67□□□□□ -0.86
XRN1-207ENST00000468894 H3BRJ5 948 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 LINC01387J3KSC0 135 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
XRN1-207ENST00000468894 ELNP15502 786 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 CDC25BP30305 580 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 GRIA4P48058 902 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 GRM2Q14416 872 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 COL19A1Q14993 1142 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 VN1R5Q7Z5H4 357 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 FBXO11Q86XK2 927 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 BSNDQ8WZ55 320 aa9.66□□□□□ -0.86
XRN1-207ENST00000468894 TM4SF5O14894 197 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 ITGB2P05107 769 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 GRIK4Q16099 956 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.65□□□□□ -0.86
XRN1-207ENST00000468894 PRPF40BQ6NWY9 871 aaKnown RBP9.65□□□□□ -0.86
XRN1-207ENST00000468894 GLIS3Q8NEA6 775 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 FBF1Q8TES7 1133 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 ABCB6Q9NP58 842 aa9.65□□□□□ -0.86
XRN1-207ENST00000468894 LDHBP07195 334 aaKnown RBP9.64□□□□□ -0.87
XRN1-207ENST00000468894 CHRNA4P43681 627 aa9.64□□□□□ -0.87
XRN1-207ENST00000468894 ATP2B2Q01814 1243 aa9.64□□□□□ -0.87
XRN1-207ENST00000468894 GALNT11Q8NCW6 608 aa9.64□□□□□ -0.87
XRN1-207ENST00000468894 CARD10Q9BWT7 1032 aa9.64□□□□□ -0.87
XRN1-207ENST00000468894 SRA1Q9HD15 236 aaKnown RBP9.64□□□□□ -0.87
XRN1-207ENST00000468894 NLRP2Q9NX02 1062 aa9.64□□□□□ -0.87
XRN1-207ENST00000468894 A0A096LPE4 126 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 A0A1W2PPZ6 126 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 FAM177BA6PVY3 158 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 DLL1O00548 723 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 SELPP16109 830 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 CABP4P57796 275 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 ALG1LQ6GMV1 187 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 SHISA2Q6UWI4 295 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 MAP4K3Q8IVH8 894 aa9.63□□□□□ -0.87
XRN1-207ENST00000468894 FSCN2O14926 492 aa9.62□□□□□ -0.87
XRN1-207ENST00000468894 PLA2G4EQ3MJ16 856 aa9.62□□□□□ -0.87
XRN1-207ENST00000468894 EAPPQ56P03 285 aaPredicted RBP9.62□□□□□ -0.87
XRN1-207ENST00000468894 FBXO33Q7Z6M2 555 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms