RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 TRIM5Q9C035 493 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 UBR2Q8IWV8 1755 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 ZNF165P49910 485 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 LLPHQ9BRT6 129 aaKnown RBP18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 DNAJC25Q9H1X3 360 aa18.57■□□□□ 0.56
TSPAN4-211ENST00000468468 FOXO4P98177 505 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 CCDC186Q7Z3E2 898 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 TDRD7Q8NHU6 1098 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 PAG1Q9NWQ8 432 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 TOGARAM1Q9Y4F4 1720 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 APOBRQ0VD83 1088 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 NSUN7Q8NE18 718 aaKnown RBP18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 HELLSQ9NRZ9 838 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 ASAP1Q9ULH1 1129 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 KIF3AQ9Y496 699 aa18.56■□□□□ 0.56
TSPAN4-211ENST00000468468 ZNF75DP51815 510 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 TIMM10P62072 90 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 BCL11BQ9C0K0 894 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 TNS2Q63HR2 1409 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 H7C1W4 665 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 PLA2G4DQ86XP0 818 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 BBXQ8WY36 941 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 PIGBQ92521 554 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 ZNF330Q9Y3S2 320 aaPredicted RBP18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 PAPPAQ13219 1627 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 PALLDQ8WX93 1383 aa18.55■□□□□ 0.56
TSPAN4-211ENST00000468468 DSCC1Q9BVC3 393 aa18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 NRBP1Q9UHY1 535 aa18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 PTPDC1A2A3K4 754 aa18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 FAM177BA6PVY3 158 aa18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 CCT2P78371 535 aaKnown RBP18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 NAA16Q6N069 864 aaPredicted RBP18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 ZNF710Q8N1W2 664 aa18.54■□□□□ 0.56
TSPAN4-211ENST00000468468 CTDNEP1O95476 244 aa18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 ADD1P35611 737 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 EXOSC10Q01780 885 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 ZMYM1Q5SVZ6 1142 aa18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 NAP1L2Q9ULW6 460 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 ROBO1Q9Y6N7 1651 aa18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 LRMPQ12912 555 aa18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 CCAR1Q8IX12 1150 aaKnown RBP18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 FTOQ9C0B1 505 aaKnown RBP eCLIP18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 RCOR1Q9UKL0 485 aa18.53■□□□□ 0.56
TSPAN4-211ENST00000468468 A0A0G2JLW4 131 aa18.52■□□□□ 0.56
TSPAN4-211ENST00000468468 DNAJC10Q8IXB1 793 aa18.52■□□□□ 0.56
TSPAN4-211ENST00000468468 CWC25Q9NXE8 425 aaPredicted RBP18.52■□□□□ 0.56
TSPAN4-211ENST00000468468 E7EWF7 191 aa18.52■□□□□ 0.55
TSPAN4-211ENST00000468468 HSPD1P10809 573 aaKnown RBP18.52■□□□□ 0.55
TSPAN4-211ENST00000468468 IL15P40933 162 aaPredicted RBP18.52■□□□□ 0.55
TSPAN4-211ENST00000468468 NCOA5Q9HCD5 579 aaKnown RBP18.52■□□□□ 0.55
TSPAN4-211ENST00000468468 GPR108Q9NPR9 543 aa18.52■□□□□ 0.55
TSPAN4-211ENST00000468468 RIOK3O14730 519 aaKnown RBP18.51■□□□□ 0.55
TSPAN4-211ENST00000468468 CAVIN2O95810 425 aa18.51■□□□□ 0.55
TSPAN4-211ENST00000468468 PPFIA3O75145 1194 aa18.51■□□□□ 0.55
TSPAN4-211ENST00000468468 LRRC24Q50LG9 513 aa18.51■□□□□ 0.55
TSPAN4-211ENST00000468468 AGXT2Q9BYV1 514 aa18.51■□□□□ 0.55
TSPAN4-211ENST00000468468 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
TSPAN4-211ENST00000468468 IFIT1P09914 478 aaKnown RBP18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 ZSCAN25Q6NSZ9 544 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 CHST3Q7LGC8 479 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 ZNF594Q96JF6 807 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 USP28Q96RU2 1077 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 BCL2L12Q9HB09 334 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 CLIP2Q9UDT6 1046 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 LAMA4Q16363 1823 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 GOLGA6L19H0YKK7 550 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 GTF2E1P29083 439 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 ZNF396Q96N95 335 aaPredicted RBP18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 GOLPH3LQ9H4A5 285 aa18.5■□□□□ 0.55
TSPAN4-211ENST00000468468 MAST3O60307 1309 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 CTAGE5O15320 804 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 RNF113AO15541 343 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 GUCY1B3Q02153 619 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 CCDC94Q9BW85 323 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 EYA2O00167 538 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 PDIA3P30101 505 aaKnown RBP18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 IQCB1Q15051 598 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 CCDC73Q6ZRK6 1079 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 C11orf57Q6ZUT1 292 aaPredicted RBP18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 DISP2A7MBM2 1401 aa18.49■□□□□ 0.55
TSPAN4-211ENST00000468468 DMTNQ08495 405 aa18.48■□□□□ 0.55
TSPAN4-211ENST00000468468 A0A1B0GUL7 405 aa18.48■□□□□ 0.55
TSPAN4-211ENST00000468468 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 STX1AQ16623 288 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 ATL3Q6DD88 541 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 TICAM2Q86XR7 235 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 SYTL4Q96C24 671 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 ZNF274Q96GC6 653 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 COL14A1Q05707 1796 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 SALL1Q9NSC2 1324 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 M0R2C6 588 aa18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 ZSCAN20P17040 1043 aaPredicted RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 SNW1Q13573 536 aaKnown RBP18.47■□□□□ 0.55
TSPAN4-211ENST00000468468 TTLL5Q6EMB2 1281 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms