RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 ITGA6P23229 1130 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 RARSP54136 660 aaKnown RBP14.11□□□□□ -0.15
COL4A6-205ENST00000468338 CXCL9Q07325 125 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 WASHC4Q2M389 1173 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 FAM161AQ3B820 660 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 EPHA10Q5JZY3 1008 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 SMC1BQ8NDV3 1235 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 KAZALD1Q96I82 304 aa14.11□□□□□ -0.15
COL4A6-205ENST00000468338 SCNN1DP51172 638 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 HNRNPUQ00839 825 aaKnown RBP eCLIP14.1□□□□□ -0.15
COL4A6-205ENST00000468338 EYA3Q99504 573 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 SLC24A3Q9HC58 644 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 SMC4Q9NTJ3 1288 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 C9orf78Q9NZ63 289 aaPredicted RBP14.1□□□□□ -0.15
COL4A6-205ENST00000468338 HACL1Q9UJ83 578 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 MINPP1Q9UNW1 487 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 XDHP47989 1333 aa14.1□□□□□ -0.15
COL4A6-205ENST00000468338 C6orf229H3BNL8 230 aa14.09□□□□□ -0.15
COL4A6-205ENST00000468338 NBPF7P0C2Y1 421 aaPredicted RBP14.09□□□□□ -0.15
COL4A6-205ENST00000468338 ANKIB1Q9P2G1 1089 aa14.09□□□□□ -0.15
COL4A6-205ENST00000468338 GGA1Q9UJY5 639 aa14.09□□□□□ -0.15
COL4A6-205ENST00000468338 ADAMTSL1Q8N6G6 1762 aa14.09□□□□□ -0.15
COL4A6-205ENST00000468338 UFL1O94874 794 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 POTEIP0CG38 1075 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 POTEJP0CG39 1038 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 ATP2B4P23634 1241 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 EPHX2P34913 555 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 IGHMBP2P38935 993 aaKnown RBP14.08□□□□□ -0.16
COL4A6-205ENST00000468338 RABL6Q3YEC7 729 aaPredicted RBP14.08□□□□□ -0.16
COL4A6-205ENST00000468338 CIAPIN1Q6FI81 312 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 LMBR1LQ6UX01 489 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 ARHGAP45Q92619 1136 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 SUCLG2Q96I99 432 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 USP44Q9H0E7 712 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 NOB1Q9ULX3 412 aaKnown RBP14.08□□□□□ -0.16
COL4A6-205ENST00000468338 GJA3Q9Y6H8 435 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 ZBED9Q6R2W3 1325 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 SPEF2Q9C093 1822 aa14.08□□□□□ -0.16
COL4A6-205ENST00000468338 SCN9AQ15858 1988 aa14.07□□□□□ -0.16
COL4A6-205ENST00000468338 ANKRD18BA2A2Z9 1011 aa14.07□□□□□ -0.16
COL4A6-205ENST00000468338 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
COL4A6-205ENST00000468338 IFIT5Q13325 482 aaKnown RBP14.07□□□□□ -0.16
COL4A6-205ENST00000468338 PNMA8AQ86V59 439 aaPredicted RBP14.07□□□□□ -0.16
COL4A6-205ENST00000468338 LDHDQ86WU2 507 aa14.07□□□□□ -0.16
COL4A6-205ENST00000468338 GPR101Q96P66 508 aaPredicted RBP14.07□□□□□ -0.16
COL4A6-205ENST00000468338 ZC3H12CQ9C0D7 883 aaKnown RBP14.07□□□□□ -0.16
COL4A6-205ENST00000468338 RIMBP2O15034 1052 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 APLP1P51693 650 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 TNIP1Q15025 636 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 MPHOSPH8Q99549 860 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 DBNDD1Q9H9R9 158 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 GPRC5DQ9NZD1 345 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 LEMD3Q9Y2U8 911 aa14.06□□□□□ -0.16
COL4A6-205ENST00000468338 ECE2O60344 883 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 ZMYND10O75800 440 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 RAD17O75943 681 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 EPS15P42566 896 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 CCT4P50991 539 aaKnown RBP14.05□□□□□ -0.16
COL4A6-205ENST00000468338 CAMK2BQ13554 666 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 ANKRD44Q8N8A2 993 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 API5Q9BZZ5 524 aaKnown RBP14.05□□□□□ -0.16
COL4A6-205ENST00000468338 ANKRD2Q9GZV1 360 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 KCNQ5Q9NR82 932 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 MED23Q9ULK4 1368 aa14.05□□□□□ -0.16
COL4A6-205ENST00000468338 PSME4Q14997 1843 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 PSMD14O00487 310 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 ITGBL1O95965 494 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-205ENST00000468338 VIL1P09327 827 aaKnown RBP14.04□□□□□ -0.16
COL4A6-205ENST00000468338 LMOD1P29536 600 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-205ENST00000468338 GMPSP49915 693 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-205ENST00000468338 CHRNDQ07001 517 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 DOK7Q18PE1 504 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 CCDC57Q2TAC2 916 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 USP50Q70EL3 339 aaPredicted RBP14.04□□□□□ -0.16
COL4A6-205ENST00000468338 DPF2Q92785 391 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 BICC1Q9H694 974 aaKnown RBP14.04□□□□□ -0.16
COL4A6-205ENST00000468338 KIF16BQ96L93 1317 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 ZNF609O15014 1411 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
COL4A6-205ENST00000468338 INTS3Q68E01 1043 aaKnown RBP14.03□□□□□ -0.16
COL4A6-205ENST00000468338 C15orf52Q6ZUT6 534 aaKnown RBP14.03□□□□□ -0.16
COL4A6-205ENST00000468338 PODNQ7Z5L7 613 aa14.03□□□□□ -0.16
COL4A6-205ENST00000468338 DNAJC5GQ8N7S2 189 aa14.03□□□□□ -0.16
COL4A6-205ENST00000468338 ZNF804BA4D1E1 1349 aa14.03□□□□□ -0.16
COL4A6-205ENST00000468338 PASKQ96RG2 1323 aa14.03□□□□□ -0.16
COL4A6-205ENST00000468338 IRS2Q9Y4H2 1338 aa14.03□□□□□ -0.16
COL4A6-205ENST00000468338 CEP350Q5VT06 3117 aa14.02□□□□□ -0.16
COL4A6-205ENST00000468338 RPS12P25398 132 aaKnown RBP14.02□□□□□ -0.17
COL4A6-205ENST00000468338 EAPPQ56P03 285 aaPredicted RBP14.02□□□□□ -0.17
COL4A6-205ENST00000468338 TXNRD3Q86VQ6 643 aa14.02□□□□□ -0.17
COL4A6-205ENST00000468338 ZNF594Q96JF6 807 aaPredicted RBP14.02□□□□□ -0.17
COL4A6-205ENST00000468338 ADARB2Q9NS39 739 aaKnown RBP14.02□□□□□ -0.17
COL4A6-205ENST00000468338 PGAP2Q9UHJ9 254 aa14.02□□□□□ -0.17
COL4A6-205ENST00000468338 CNOT7Q9UIV1 285 aaKnown RBP14.02□□□□□ -0.17
COL4A6-205ENST00000468338 CHMP3Q9Y3E7 222 aa14.02□□□□□ -0.17
COL4A6-205ENST00000468338 BCAR3O75815 825 aa14.01□□□□□ -0.17
COL4A6-205ENST00000468338 LDHAL6AQ6ZMR3 332 aa14.01□□□□□ -0.17
COL4A6-205ENST00000468338 GMLQ99445 158 aa14.01□□□□□ -0.17
COL4A6-205ENST00000468338 COA1Q9GZY4 146 aa14.01□□□□□ -0.17
COL4A6-205ENST00000468338 RIPOR2Q9Y4F9 1068 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms