RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 A0A0G2JLW4 131 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 H0YIN7 160 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 APBB1O00213 710 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 RIMBP2O15034 1052 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 NPHP1O15259 732 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 NPR1P16066 1061 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 CHRNA5P30532 468 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 ALDH1B1P30837 517 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 TGFB2P61812 414 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 GRAPQ13588 217 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 VARS2Q5ST30 1063 aaKnown RBP7.36□□□□□ -1.23
USP39-213ENST00000467885 C2CD5Q86YS7 1000 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 ANKRD18AQ8IVF6 992 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 SP8Q8IXZ3 490 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 MICALL2Q8IY33 904 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 VGLL2Q8N8G2 317 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 HELBQ8NG08 1087 aaPredicted RBP7.36□□□□□ -1.23
USP39-213ENST00000467885 GRAPLQ8TC17 118 aaPredicted RBP7.36□□□□□ -1.23
USP39-213ENST00000467885 OTUD7AQ8TE49 926 aaPredicted RBP7.36□□□□□ -1.23
USP39-213ENST00000467885 KIF1BPQ96EK5 621 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 MASTLQ96GX5 879 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 RBM17Q96I25 401 aaKnown RBP7.36□□□□□ -1.23
USP39-213ENST00000467885 LRRCC1Q9C099 1032 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 LNPKQ9C0E8 428 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 SPON1Q9HCB6 807 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 IL1RAPL2Q9NP60 686 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 GPR108Q9NPR9 543 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 CEP126Q9P2H0 1117 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 ARFGEF2Q9Y6D5 1785 aa7.36□□□□□ -1.23
USP39-213ENST00000467885 SNAP23O00161 211 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 TAF5LO75529 589 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 PDE8BO95263 885 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 DPEP1P16444 411 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 FGFR2P21802 821 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 POLD1P28340 1107 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 STYK1Q6J9G0 422 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 SLC51AQ86UW1 340 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 ERC1Q8IUD2 1116 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 PLEKHM2Q8IWE5 1019 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 CDC5LQ99459 802 aaKnown RBP7.35□□□□□ -1.23
USP39-213ENST00000467885 MPHOSPH8Q99549 860 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 CCDC8Q9H0W5 538 aaPredicted RBP7.35□□□□□ -1.23
USP39-213ENST00000467885 CNNM1Q9NRU3 951 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 STAP2Q9UGK3 403 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 CD2APQ9Y5K6 639 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 RIC1Q4ADV7 1423 aa7.35□□□□□ -1.23
USP39-213ENST00000467885 SALL3Q9BXA9 1300 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 IGHMBP2P38935 993 aaKnown RBP7.34□□□□□ -1.23
USP39-213ENST00000467885 PLCB2Q00722 1185 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 CHRNDQ07001 517 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 TNNI3KQ59H18 835 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 TAF7LQ5H9L4 462 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 RPGRQ92834 1020 aaKnown RBP7.34□□□□□ -1.23
USP39-213ENST00000467885 ZNF622Q969S3 477 aaKnown RBP eCLIP7.34□□□□□ -1.23
USP39-213ENST00000467885 OSBPL3Q9H4L5 887 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 ATP6V0A2Q9Y487 856 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 FPGT-TNNI3KV9GXZ4 949 aa7.34□□□□□ -1.23
USP39-213ENST00000467885 MROH5Q6ZUA9 1318 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 PDE1AP54750 535 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 GPSM2P81274 684 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 OS9Q13438 667 aaPredicted RBP7.33□□□□□ -1.24
USP39-213ENST00000467885 UBE4AQ14139 1066 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 METTL24Q5JXM2 366 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 OLFM4Q6UX06 510 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 CLASRPQ8N2M8 674 aaKnown RBP7.33□□□□□ -1.24
USP39-213ENST00000467885 CNKSR1Q969H4 720 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 RNF166Q96A37 237 aaPredicted RBP7.33□□□□□ -1.24
USP39-213ENST00000467885 ANKRD2Q9GZV1 360 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 ZSWIM6Q9HCJ5 1215 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 PODXL2Q9NZ53 605 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 AKAP2Q9Y2D5 859 aa7.33□□□□□ -1.24
USP39-213ENST00000467885 IRS2Q9Y4H2 1338 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 A0A1B0GUL7 405 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 C15orf52Q6ZUT6 534 aaKnown RBP7.32□□□□□ -1.24
USP39-213ENST00000467885 TMC4Q7Z404 712 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 FBXO33Q7Z6M2 555 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 AACSQ86V21 672 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 TXNRD3Q86VQ6 643 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 TTLL6Q8N841 843 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 LPIN2Q92539 896 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 XAGE2Q96GT9 111 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 MS4A4AQ96JQ5 239 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 FAM84BQ96KN1 310 aaPredicted RBP7.32□□□□□ -1.24
USP39-213ENST00000467885 NEUROD6Q96NK8 337 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 DBNDD2Q9BQY9 259 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 SYT17Q9BSW7 474 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 TLR7Q9NYK1 1049 aaKnown RBP7.32□□□□□ -1.24
USP39-213ENST00000467885 PIM2Q9P1W9 311 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 POLLQ9UGP5 575 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 DBNLQ9UJU6 430 aaKnown RBP7.32□□□□□ -1.24
USP39-213ENST00000467885 NSFL1CQ9UNZ2 370 aaKnown RBP7.32□□□□□ -1.24
USP39-213ENST00000467885 LEMD3Q9Y2U8 911 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 C4AP0C0L4 1744 aa7.32□□□□□ -1.24
USP39-213ENST00000467885 BCORQ6W2J9 1755 aa7.31□□□□□ -1.24
USP39-213ENST00000467885 ATP5JP18859 108 aa7.31□□□□□ -1.24
USP39-213ENST00000467885 ADORA1P30542 326 aa7.31□□□□□ -1.24
USP39-213ENST00000467885 BCAMP50895 628 aa7.31□□□□□ -1.24
USP39-213ENST00000467885 GPR153Q6NV75 609 aa7.31□□□□□ -1.24
USP39-213ENST00000467885 PRPF40BQ6NWY9 871 aaKnown RBP7.31□□□□□ -1.24
USP39-213ENST00000467885 ZNF687Q8N1G0 1237 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms