RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 LRIT3Q3SXY7 679 aa15.65■□□□□ 0.1
VPS26A-204ENST00000467852 LRRC37AA6NMS7 1700 aa15.65■□□□□ 0.1
VPS26A-204ENST00000467852 RPTORQ8N122 1335 aa15.65■□□□□ 0.1
VPS26A-204ENST00000467852 GJA8P48165 433 aa15.64■□□□□ 0.09
VPS26A-204ENST00000467852 KIF22Q14807 665 aa15.64■□□□□ 0.09
VPS26A-204ENST00000467852 MTFR1Q15390 333 aa15.64■□□□□ 0.09
VPS26A-204ENST00000467852 NBPF9Q3BBW0 867 aa15.64■□□□□ 0.09
VPS26A-204ENST00000467852 GIGYF2Q6Y7W6 1299 aaKnown RBP15.64■□□□□ 0.09
VPS26A-204ENST00000467852 RRP7AQ9Y3A4 280 aaKnown RBP15.64■□□□□ 0.09
VPS26A-204ENST00000467852 DIAPH1O60610 1272 aaKnown RBP15.63■□□□□ 0.09
VPS26A-204ENST00000467852 SYMPKQ92797 1274 aaKnown RBP15.63■□□□□ 0.09
VPS26A-204ENST00000467852 TTC28Q96AY4 2481 aa15.63■□□□□ 0.09
VPS26A-204ENST00000467852 GJB1P08034 283 aa15.62■□□□□ 0.09
VPS26A-204ENST00000467852 HCLS1P14317 486 aaPredicted RBP15.62■□□□□ 0.09
VPS26A-204ENST00000467852 GPSM2P81274 684 aa15.62■□□□□ 0.09
VPS26A-204ENST00000467852 ZFYVE28Q9HCC9 887 aa15.62■□□□□ 0.09
VPS26A-204ENST00000467852 RAPGEFL1Q9UHV5 662 aa15.62■□□□□ 0.09
VPS26A-204ENST00000467852 FARP2O94887 1054 aaPredicted RBP15.61■□□□□ 0.09
VPS26A-204ENST00000467852 GNRH1P01148 92 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 BCAMP50895 628 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 PRMT2P55345 433 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 TBC1D16Q8TBP0 767 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 GMLQ99445 158 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 PTPN18Q99952 460 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 GDF15Q99988 308 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 PANK3Q9H999 370 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 PSME4Q14997 1843 aa15.61■□□□□ 0.09
VPS26A-204ENST00000467852 UNCXA6NJT0 531 aa15.6■□□□□ 0.09
VPS26A-204ENST00000467852 PPP1R12BO60237 982 aaPredicted RBP15.6■□□□□ 0.09
VPS26A-204ENST00000467852 MYL6BP14649 208 aa15.6■□□□□ 0.09
VPS26A-204ENST00000467852 APOBEC3FQ8IUX4 373 aaKnown RBP15.6■□□□□ 0.09
VPS26A-204ENST00000467852 OGFOD1Q8N543 542 aa15.6■□□□□ 0.09
VPS26A-204ENST00000467852 CLMNQ96JQ2 1002 aa15.6■□□□□ 0.09
VPS26A-204ENST00000467852 TESPA1A2RU30 521 aaPredicted RBP15.59■□□□□ 0.09
VPS26A-204ENST00000467852 WNT10BO00744 389 aa15.59■□□□□ 0.09
VPS26A-204ENST00000467852 TAF1CQ15572 869 aaPredicted RBP15.59■□□□□ 0.09
VPS26A-204ENST00000467852 MAP3K11Q16584 847 aa15.59■□□□□ 0.09
VPS26A-204ENST00000467852 RNF208Q9H0X6 261 aa15.59■□□□□ 0.09
VPS26A-204ENST00000467852 FZD1Q9UP38 647 aa15.59■□□□□ 0.09
VPS26A-204ENST00000467852 WDHD1O75717 1129 aaPredicted RBP15.58■□□□□ 0.08
VPS26A-204ENST00000467852 TDHQ8IZJ6 230 aa15.58■□□□□ 0.08
VPS26A-204ENST00000467852 USP17L3A6NCW0 530 aa15.57■□□□□ 0.08
VPS26A-204ENST00000467852 USP17L4A6NCW7 530 aa15.57■□□□□ 0.08
VPS26A-204ENST00000467852 CCL5P13501 91 aa15.57■□□□□ 0.08
VPS26A-204ENST00000467852 USP17L1Q7RTZ2 530 aa15.57■□□□□ 0.08
VPS26A-204ENST00000467852 RTF1Q92541 710 aaKnown RBP15.57■□□□□ 0.08
VPS26A-204ENST00000467852 CELF1Q92879 486 aaKnown RBP15.56■□□□□ 0.08
VPS26A-204ENST00000467852 BIN2Q9UBW5 565 aaPredicted RBP15.56■□□□□ 0.08
VPS26A-204ENST00000467852 TRMT112Q9UI30 125 aaKnown RBP15.56■□□□□ 0.08
VPS26A-204ENST00000467852 IRS2Q9Y4H2 1338 aa15.56■□□□□ 0.08
VPS26A-204ENST00000467852 SH3TC1Q8TE82 1336 aa15.55■□□□□ 0.08
VPS26A-204ENST00000467852 GRK4P32298 578 aa15.55■□□□□ 0.08
VPS26A-204ENST00000467852 UBXN2AP68543 259 aa15.55■□□□□ 0.08
VPS26A-204ENST00000467852 LACTBP83111 547 aaPredicted RBP15.55■□□□□ 0.08
VPS26A-204ENST00000467852 U2AF1L4Q8WU68 220 aaKnown RBP15.55■□□□□ 0.08
VPS26A-204ENST00000467852 GUCD1Q96NT3 240 aa15.55■□□□□ 0.08
VPS26A-204ENST00000467852 ARHGAP39Q9C0H5 1083 aa15.55■□□□□ 0.08
VPS26A-204ENST00000467852 TNFRSF10AO00220 468 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 U2SURPO15042 1029 aaKnown RBP15.54■□□□□ 0.08
VPS26A-204ENST00000467852 UFL1O94874 794 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 CAPN2P17655 700 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 HOXD10P28358 340 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 GJA5P36382 358 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 IREB2P48200 963 aaKnown RBP15.54■□□□□ 0.08
VPS26A-204ENST00000467852 FAM109BQ6ICB4 259 aaPredicted RBP15.54■□□□□ 0.08
VPS26A-204ENST00000467852 RAET1EQ8TD07 263 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 TRIM47Q96LD4 638 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 ANKIB1Q9P2G1 1089 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 ZSWIM8A7E2V4 1837 aa15.54■□□□□ 0.08
VPS26A-204ENST00000467852 TMEM265A0A087WTH1 108 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 SASH1O94885 1247 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 MMP14P50281 582 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 MCM10Q7L590 875 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 PODNQ7Z5L7 613 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 PODXL2Q9NZ53 605 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 GGA1Q9UJY5 639 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 KNSTRNQ9Y448 316 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 PRUNE2Q8WUY3 3088 aa15.53■□□□□ 0.08
VPS26A-204ENST00000467852 EYSQ5T1H1 3165 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 COL1A1P02452 1464 aaPredicted RBP15.52■□□□□ 0.08
VPS26A-204ENST00000467852 SGPL1O95470 568 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 SUPT20HL1Q3ZLR7 823 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 HSP90AB3PQ58FF7 597 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 ANKRD13AQ8IZ07 590 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 DEFB129Q9H1M3 183 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 RIPOR2Q9Y4F9 1068 aa15.52■□□□□ 0.08
VPS26A-204ENST00000467852 ALPK3Q96L96 1907 aa15.52■□□□□ 0.07
VPS26A-204ENST00000467852 POTEB2H3BUK9 544 aa15.51■□□□□ 0.07
VPS26A-204ENST00000467852 ECM2O94769 699 aaPredicted RBP15.51■□□□□ 0.07
VPS26A-204ENST00000467852 TFRCP02786 760 aaKnown RBP15.51■□□□□ 0.07
VPS26A-204ENST00000467852 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
VPS26A-204ENST00000467852 NLRP10Q86W26 655 aa15.51■□□□□ 0.07
VPS26A-204ENST00000467852 MS4A4AQ96JQ5 239 aa15.51■□□□□ 0.07
VPS26A-204ENST00000467852 UBE2OQ9C0C9 1292 aaKnown RBP15.51■□□□□ 0.07
VPS26A-204ENST00000467852 SRRDQ9UH36 339 aa15.51■□□□□ 0.07
VPS26A-204ENST00000467852 ZMYND8Q9ULU4 1186 aaPredicted RBP15.51■□□□□ 0.07
VPS26A-204ENST00000467852 MUC3AQ02505 3323 aa15.5■□□□□ 0.07
VPS26A-204ENST00000467852 MYO3BQ8WXR4 1341 aa15.5■□□□□ 0.07
VPS26A-204ENST00000467852 TLR2O60603 784 aa15.5■□□□□ 0.07
VPS26A-204ENST00000467852 RPS8P62241 208 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms