RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 MED23Q9ULK4 1368 aa21.03■□□□□ 0.96
VARS2-204ENST00000467717 A0A1B0GUL7 405 aa21.03■□□□□ 0.96
VARS2-204ENST00000467717 KIAA2012Q0VF49 1180 aa21.03■□□□□ 0.96
VARS2-204ENST00000467717 CLASRPQ8N2M8 674 aaKnown RBP21.03■□□□□ 0.96
VARS2-204ENST00000467717 IL1RAPL2Q9NP60 686 aa21.03■□□□□ 0.96
VARS2-204ENST00000467717 PPIP5K2O43314 1243 aa21.02■□□□□ 0.96
VARS2-204ENST00000467717 KLRK1P26718 216 aa21.02■□□□□ 0.96
VARS2-204ENST00000467717 IARSP41252 1262 aaKnown RBP21.02■□□□□ 0.96
VARS2-204ENST00000467717 TIMM10P62072 90 aa21.02■□□□□ 0.96
VARS2-204ENST00000467717 ZBTB47Q9UFB7 747 aaPredicted RBP21.02■□□□□ 0.96
VARS2-204ENST00000467717 RIMBP2O15034 1052 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 LMNB1P20700 586 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 AOC3Q16853 763 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 ANKRD45Q5TZF3 282 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 LARGE2Q8N3Y3 721 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 EAF2Q96CJ1 260 aaPredicted RBP21.01■□□□□ 0.95
VARS2-204ENST00000467717 NEUROD6Q96NK8 337 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 DUOX1Q9NRD9 1551 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 IRS2Q9Y4H2 1338 aa21.01■□□□□ 0.95
VARS2-204ENST00000467717 ARFGEF1Q9Y6D6 1849 aa21■□□□□ 0.95
VARS2-204ENST00000467717 SMARCA5O60264 1052 aaPredicted RBP21■□□□□ 0.95
VARS2-204ENST00000467717 AACSQ86V21 672 aa21■□□□□ 0.95
VARS2-204ENST00000467717 TXNRD3Q86VQ6 643 aa21■□□□□ 0.95
VARS2-204ENST00000467717 GPBP1L1Q9HC44 474 aaPredicted RBP21■□□□□ 0.95
VARS2-204ENST00000467717 ZNF609O15014 1411 aa20.99■□□□□ 0.95
VARS2-204ENST00000467717 PRELPP51888 382 aa20.99■□□□□ 0.95
VARS2-204ENST00000467717 CAVIN4Q5BKX8 364 aa20.99■□□□□ 0.95
VARS2-204ENST00000467717 B4GALNT3Q6L9W6 998 aa20.99■□□□□ 0.95
VARS2-204ENST00000467717 CENPQQ7L2Z9 268 aaPredicted RBP20.99■□□□□ 0.95
VARS2-204ENST00000467717 XAGE2Q96GT9 111 aa20.99■□□□□ 0.95
VARS2-204ENST00000467717 FAM84BQ96KN1 310 aaPredicted RBP20.99■□□□□ 0.95
VARS2-204ENST00000467717 KDM2BQ8NHM5 1336 aa20.99■□□□□ 0.95
VARS2-204ENST00000467717 CACNA1SQ13698 1873 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 ADORA1P30542 326 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 HIBADHP31937 336 aaKnown RBP20.98■□□□□ 0.95
VARS2-204ENST00000467717 ZNF804AQ7Z570 1209 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 VPS37DQ86XT2 251 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 JDP2Q8WYK2 163 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 COA1Q9GZY4 146 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 CCDC8Q9H0W5 538 aaPredicted RBP20.98■□□□□ 0.95
VARS2-204ENST00000467717 BCL11AQ9H165 835 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 LTBP1Q14766 1721 aa20.98■□□□□ 0.95
VARS2-204ENST00000467717 SPEF2Q9C093 1822 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 G3V3G9 751 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 IFIT2P09913 472 aaKnown RBP20.97■□□□□ 0.95
VARS2-204ENST00000467717 GYG1P46976 350 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 NUCB1Q02818 461 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 GORABQ5T7V8 394 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 DCAF8Q5TAQ9 597 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 FBXO33Q7Z6M2 555 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 DBNDD2Q9BQY9 259 aa20.97■□□□□ 0.95
VARS2-204ENST00000467717 DBNLQ9UJU6 430 aaKnown RBP20.97■□□□□ 0.95
VARS2-204ENST00000467717 BCAMP50895 628 aa20.96■□□□□ 0.95
VARS2-204ENST00000467717 DOK7Q18PE1 504 aa20.96■□□□□ 0.95
VARS2-204ENST00000467717 CHD1LQ86WJ1 897 aa20.96■□□□□ 0.95
VARS2-204ENST00000467717 NIM1KQ8IY84 436 aa20.96■□□□□ 0.95
VARS2-204ENST00000467717 C9orf131Q5VYM1 1079 aa20.95■□□□□ 0.94
VARS2-204ENST00000467717 CCDC102BQ68D86 513 aa20.95■□□□□ 0.94
VARS2-204ENST00000467717 PODNQ7Z5L7 613 aa20.95■□□□□ 0.94
VARS2-204ENST00000467717 DBNDD1Q9H9R9 158 aa20.95■□□□□ 0.94
VARS2-204ENST00000467717 CD209Q9NNX6 404 aa20.95■□□□□ 0.94
VARS2-204ENST00000467717 GNL3LQ9NVN8 582 aaKnown RBP20.95■□□□□ 0.94
VARS2-204ENST00000467717 TLR7Q9NYK1 1049 aaKnown RBP20.95■□□□□ 0.94
VARS2-204ENST00000467717 RNF181Q9P0P0 153 aa20.95■□□□□ 0.94
VARS2-204ENST00000467717 FER1L6Q2WGJ9 1857 aa20.94■□□□□ 0.94
VARS2-204ENST00000467717 CCDC158Q5M9N0 1113 aa20.94■□□□□ 0.94
VARS2-204ENST00000467717 LNPKQ9C0E8 428 aa20.94■□□□□ 0.94
VARS2-204ENST00000467717 ZNRF3Q9ULT6 936 aa20.94■□□□□ 0.94
VARS2-204ENST00000467717 ECE2O60344 883 aa20.93■□□□□ 0.94
VARS2-204ENST00000467717 IL1R1P14778 569 aa20.93■□□□□ 0.94
VARS2-204ENST00000467717 PHKA1P46020 1223 aa20.93■□□□□ 0.94
VARS2-204ENST00000467717 C16orf71Q8IYS4 520 aaPredicted RBP20.92■□□□□ 0.94
VARS2-204ENST00000467717 TDRD7Q8NHU6 1098 aaKnown RBP20.92■□□□□ 0.94
VARS2-204ENST00000467717 ZNF526Q8TF50 670 aaPredicted RBP20.92■□□□□ 0.94
VARS2-204ENST00000467717 ZBTB22O15209 634 aa20.91■□□□□ 0.94
VARS2-204ENST00000467717 TTC39AQ5SRH9 613 aa20.91■□□□□ 0.94
VARS2-204ENST00000467717 ZNF512BQ96KM6 892 aaPredicted RBP20.91■□□□□ 0.94
VARS2-204ENST00000467717 YDJCA8MPS7 323 aa20.9■□□□□ 0.94
VARS2-204ENST00000467717 FZD9O00144 591 aa20.9■□□□□ 0.94
VARS2-204ENST00000467717 SEMA3EO15041 775 aa20.9■□□□□ 0.94
VARS2-204ENST00000467717 FRAT2O75474 233 aaPredicted RBP20.9■□□□□ 0.94
VARS2-204ENST00000467717 UQCRFS1P1P0C7P4 283 aa20.9■□□□□ 0.94
VARS2-204ENST00000467717 GPATCH3Q96I76 525 aa20.9■□□□□ 0.94
VARS2-204ENST00000467717 GTF3C3Q9Y5Q9 886 aa20.9■□□□□ 0.94
VARS2-204ENST00000467717 ZC3H4Q9UPT8 1303 aaKnown RBP20.89■□□□□ 0.93
VARS2-204ENST00000467717 ARID4AP29374 1257 aaPredicted RBP20.89■□□□□ 0.93
VARS2-204ENST00000467717 EIF6P56537 245 aaKnown RBP20.89■□□□□ 0.93
VARS2-204ENST00000467717 OTUD7AQ8TE49 926 aaPredicted RBP20.89■□□□□ 0.93
VARS2-204ENST00000467717 ECHDC1Q9NTX5 307 aa20.89■□□□□ 0.93
VARS2-204ENST00000467717 IQSEC3Q9UPP2 1182 aaPredicted RBP20.89■□□□□ 0.93
VARS2-204ENST00000467717 COL4A5P29400 1685 aa20.89■□□□□ 0.93
VARS2-204ENST00000467717 A0A1B0GUL6 1792 aa20.88■□□□□ 0.93
VARS2-204ENST00000467717 DENND2AQ9ULE3 1009 aa20.88■□□□□ 0.93
VARS2-204ENST00000467717 USP17L3A6NCW0 530 aa20.87■□□□□ 0.93
VARS2-204ENST00000467717 USP17L4A6NCW7 530 aa20.87■□□□□ 0.93
VARS2-204ENST00000467717 MX1P20591 662 aa20.87■□□□□ 0.93
VARS2-204ENST00000467717 RASGRF1Q13972 1273 aa20.87■□□□□ 0.93
VARS2-204ENST00000467717 STRIP1Q5VSL9 837 aa20.87■□□□□ 0.93
VARS2-204ENST00000467717 USP17L1Q7RTZ2 530 aa20.87■□□□□ 0.93
VARS2-204ENST00000467717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms