RNA–Protein interactions for RNA: ENST00000467539.1

CGREF1-208, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 4

Gene CGREF1, Length 548 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-208ENST00000467539 TBC1D10BQ4KMP7 808 aaPredicted RBP22.84■■□□□ 1.25
CGREF1-208ENST00000467539 STRIP1Q5VSL9 837 aa22.84■■□□□ 1.25
CGREF1-208ENST00000467539 CDC37L1Q7L3B6 337 aa22.84■■□□□ 1.25
CGREF1-208ENST00000467539 ARHGAP45Q92619 1136 aa22.84■■□□□ 1.25
CGREF1-208ENST00000467539 SCN9AQ15858 1988 aa22.83■■□□□ 1.25
CGREF1-208ENST00000467539 ZNF609O15014 1411 aa22.83■■□□□ 1.25
CGREF1-208ENST00000467539 SNAP23O00161 211 aa22.83■■□□□ 1.25
CGREF1-208ENST00000467539 TRAF5O00463 557 aa22.83■■□□□ 1.25
CGREF1-208ENST00000467539 HNRNPUQ00839 825 aaKnown RBP eCLIP22.83■■□□□ 1.25
CGREF1-208ENST00000467539 RBM26Q5T8P6 1007 aaKnown RBP22.83■■□□□ 1.25
CGREF1-208ENST00000467539 CST9Q5W186 159 aa22.83■■□□□ 1.25
CGREF1-208ENST00000467539 ANKRD44Q8N8A2 993 aa22.83■■□□□ 1.25
CGREF1-208ENST00000467539 MKRN1Q9UHC7 482 aaKnown RBP22.83■■□□□ 1.25
CGREF1-208ENST00000467539 IRS2Q9Y4H2 1338 aa22.82■■□□□ 1.24
CGREF1-208ENST00000467539 EGFRP00533 1210 aa22.82■■□□□ 1.24
CGREF1-208ENST00000467539 USP17L8P0C7I0 530 aa22.82■■□□□ 1.24
CGREF1-208ENST00000467539 KLRK1P26718 216 aa22.82■■□□□ 1.24
CGREF1-208ENST00000467539 DACT2Q5SW24 774 aa22.82■■□□□ 1.24
CGREF1-208ENST00000467539 GLIS2Q9BZE0 524 aaPredicted RBP22.82■■□□□ 1.24
CGREF1-208ENST00000467539 RIPOR2Q9Y4F9 1068 aa22.82■■□□□ 1.24
CGREF1-208ENST00000467539 CNTNAP1P78357 1384 aa22.81■■□□□ 1.24
CGREF1-208ENST00000467539 PLIN1O60240 522 aa22.81■■□□□ 1.24
CGREF1-208ENST00000467539 DEFB115Q30KQ5 88 aa22.81■■□□□ 1.24
CGREF1-208ENST00000467539 TTLL5Q6EMB2 1281 aa22.81■■□□□ 1.24
CGREF1-208ENST00000467539 PUS3Q9BZE2 481 aaKnown RBP22.81■■□□□ 1.24
CGREF1-208ENST00000467539 CD209Q9NNX6 404 aa22.81■■□□□ 1.24
CGREF1-208ENST00000467539 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
CGREF1-208ENST00000467539 RASSF10A6NK89 507 aa22.8■■□□□ 1.24
CGREF1-208ENST00000467539 MMP14P50281 582 aa22.8■■□□□ 1.24
CGREF1-208ENST00000467539 USP48Q86UV5 1035 aa22.8■■□□□ 1.24
CGREF1-208ENST00000467539 UBE4AQ14139 1066 aa22.79■■□□□ 1.24
CGREF1-208ENST00000467539 KIF4BQ2VIQ3 1234 aa22.79■■□□□ 1.24
CGREF1-208ENST00000467539 MYO3BQ8WXR4 1341 aa22.79■■□□□ 1.24
CGREF1-208ENST00000467539 IPO8O15397 1037 aaKnown RBP22.78■■□□□ 1.24
CGREF1-208ENST00000467539 DCPSQ96C86 337 aaKnown RBP22.78■■□□□ 1.24
CGREF1-208ENST00000467539 MYOZ2Q9NPC6 264 aa22.78■■□□□ 1.24
CGREF1-208ENST00000467539 HDAC5Q9UQL6 1122 aa22.78■■□□□ 1.24
CGREF1-208ENST00000467539 MROH5Q6ZUA9 1318 aa22.78■■□□□ 1.24
CGREF1-208ENST00000467539 KIF16BQ96L93 1317 aa22.78■■□□□ 1.24
CGREF1-208ENST00000467539 IL1R1P14778 569 aa22.77■■□□□ 1.24
CGREF1-208ENST00000467539 VEGFBP49765 207 aa22.77■■□□□ 1.24
CGREF1-208ENST00000467539 GTF2IP78347 998 aa22.77■■□□□ 1.24
CGREF1-208ENST00000467539 SCARF1Q14162 830 aa22.77■■□□□ 1.24
CGREF1-208ENST00000467539 INTS3Q68E01 1043 aaKnown RBP22.77■■□□□ 1.24
CGREF1-208ENST00000467539 ZNF804AQ7Z570 1209 aa22.77■■□□□ 1.24
CGREF1-208ENST00000467539 MXD3Q9BW11 206 aa22.77■■□□□ 1.24
CGREF1-208ENST00000467539 ABT1Q9ULW3 272 aaKnown RBP22.77■■□□□ 1.24
CGREF1-208ENST00000467539 CELF2O95319 508 aaKnown RBP22.76■■□□□ 1.23
CGREF1-208ENST00000467539 KRT26Q7Z3Y9 468 aa22.76■■□□□ 1.23
CGREF1-208ENST00000467539 OGFOD1Q8N543 542 aa22.76■■□□□ 1.23
CGREF1-208ENST00000467539 FBXW7Q969H0 707 aa22.76■■□□□ 1.23
CGREF1-208ENST00000467539 PCNTO95613 3336 aa22.75■■□□□ 1.23
CGREF1-208ENST00000467539 BCAR3O75815 825 aa22.75■■□□□ 1.23
CGREF1-208ENST00000467539 UBTFL1P0CB47 393 aaPredicted RBP22.75■■□□□ 1.23
CGREF1-208ENST00000467539 LRRC24Q50LG9 513 aa22.75■■□□□ 1.23
CGREF1-208ENST00000467539 TLL2Q9Y6L7 1015 aa22.75■■□□□ 1.23
CGREF1-208ENST00000467539 PSME4Q14997 1843 aa22.74■■□□□ 1.23
CGREF1-208ENST00000467539 RFX5P48382 616 aaPredicted RBP22.74■■□□□ 1.23
CGREF1-208ENST00000467539 SASH1O94885 1247 aa22.73■■□□□ 1.23
CGREF1-208ENST00000467539 FAM84BQ96KN1 310 aaPredicted RBP22.73■■□□□ 1.23
CGREF1-208ENST00000467539 PDE8BO95263 885 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 HIBADHP31937 336 aaKnown RBP22.72■■□□□ 1.23
CGREF1-208ENST00000467539 FKBP1AP62942 108 aaKnown RBP22.72■■□□□ 1.23
CGREF1-208ENST00000467539 METTL24Q5JXM2 366 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 DLK2Q6UY11 383 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 SAPCD2Q86UD0 394 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 SULF1Q8IWU6 871 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 TDRD7Q8NHU6 1098 aaKnown RBP22.72■■□□□ 1.23
CGREF1-208ENST00000467539 KLHDC4Q8TBB5 520 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 GGA3Q9NZ52 723 aa22.72■■□□□ 1.23
CGREF1-208ENST00000467539 ASTN2O75129 1339 aaPredicted RBP22.72■■□□□ 1.23
CGREF1-208ENST00000467539 PTPN12Q05209 780 aaKnown RBP22.71■■□□□ 1.23
CGREF1-208ENST00000467539 ANGEL2Q5VTE6 544 aaKnown RBP22.71■■□□□ 1.23
CGREF1-208ENST00000467539 ATF7IPQ6VMQ6 1270 aa22.71■■□□□ 1.23
CGREF1-208ENST00000467539 VGLL2Q8N8G2 317 aa22.71■■□□□ 1.23
CGREF1-208ENST00000467539 HHIPL1Q96JK4 782 aa22.71■■□□□ 1.23
CGREF1-208ENST00000467539 HDAC9Q9UKV0 1011 aa22.71■■□□□ 1.23
CGREF1-208ENST00000467539 WDR33Q9C0J8 1336 aaKnown RBP22.71■■□□□ 1.23
CGREF1-208ENST00000467539 EYA2O00167 538 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 TRIM27P14373 513 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 NBPF9Q3BBW0 867 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 FBXO33Q7Z6M2 555 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 KIAA0825Q8IV33 1275 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 FRAT1Q92837 279 aaPredicted RBP22.7■■□□□ 1.22
CGREF1-208ENST00000467539 ZNF408Q9H9D4 720 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 ZBED9Q6R2W3 1325 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 PITPNM2Q9BZ72 1349 aa22.7■■□□□ 1.22
CGREF1-208ENST00000467539 POLR2AP24928 1970 aaKnown RBP22.69■■□□□ 1.22
CGREF1-208ENST00000467539 TRPM7Q96QT4 1865 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 FAM205AQ6ZU69 1335 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 ADM5C9JUS6 153 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 WNT10BO00744 389 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 GNAI3P08754 354 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 HSPA1AP0DMV8 641 aaKnown RBP22.69■■□□□ 1.22
CGREF1-208ENST00000467539 HSPA1BP0DMV9 641 aaKnown RBP22.69■■□□□ 1.22
CGREF1-208ENST00000467539 ECE1P42892 770 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 GYG1P46976 350 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 CERS5Q8N5B7 392 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 MEIS3Q99687 375 aa22.69■■□□□ 1.22
CGREF1-208ENST00000467539 FBXO3Q9UK99 471 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms